// Calibration Bar Macros

//
// These macros add a calibration bar to the current image
// or stack or add calibration bars to all the images and
// stacks in a folder.
var location = "[Upper Right]";
var fil = "White";
var label = "Black";
var number = "5";
var decimal = "0";
var font = "12";
var zoom = "1";
addBar(); exit;
// Adds a calibration bar to all the images in a stack
macro "Add Calibration Bar" {
addBar();
}
// Adds a calibration bar to all the images and stacks in a folder
macro "Batch Add Calibration Bar" {
dir = getDirectory("Choose a Directory ");
list = getFileList(dir);
setBatchMode(true);
for (i=0; i<list.length; i++) {
path = dir+list[i];
open(path);
id = getImageID();
addCalibrationBar();
save(path+"-bar.tif");
close();
selectImage(id);
close();
}
}

function addBar() {
setBatchMode(true);
run("Select None");
addCalibrationBar();
setBatchMode(false);
}
function addCalibrationBar() {
if (bitDepth==24)
exit("Bars cannot be added to RGB images: "+getTitle);
nS = nSlices;
stackID = getImageID();
setSlice(1);
run("Calibration Bar...", "location="+location+" fill="+fil+" label="+label
+" number="+number+" decimal="+decimal+" font="+font+" zoom="+zoom);
barID = getImageID();
for (n=2; n<=nS; n++) {
showProgress(n, nS);
selectImage(stackID);
setSlice(n);
 run("Calibration Bar...", "location="+location+" fill="+fil+" label="+la
bel+" number="+number+" decimal="+decimal+" font="+font+" zoom="+zoom);
run("Cut");
close();
selectImage(barID);
run("Add Slice");
run("Paste");
}
run("Select None");
setSlice(1);
selectImage(stackID);
setSlice(1);
selectImage(barID);
}