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Genetic Information
Gene basic unit of genetic information. Genes determine the inherited characters. Genome the collection of genetic information.
Human Genome
Most human cells contain 46 chromosomes: 2 sex chromosomes (X,Y): XY in males. XX in females. 22 pairs of chromosomes named autosomes.
Genotypes
Phenotypes
At each locus (except for sex chromosomes) there are 2 genes. These constitute the individuals genotype at the locus. The expression of a genotype is termed a phenotype. For example, hair color, weight, or the presence or absence of a disease.
phenotypes
Male
A| a
a|a
A| a
a|a
heterozygote
homozygote
Mendelian Genetics
Y/y
y/y
Gamete production
Gamete production
Calculating Probabilities
We want to predict patterns of inheritance of traits and diseases in pedigrees. E.g., we want to know the likelihood that a dog chosen at random from the study population will have blue eyes.
X-linked Inheritance
Different results obtained from reciprocal crosses between red-eyed and whiteeyed Drosophila.
Explanation: The gene responsible for eye-color is X-linked. Females have 2 X-chromosomes, while males have 1 X-chromosome and 1 Y-chromosome.
Medical Genetics
When studying rare disorders, 6 general patterns of inheritance are observed:
Autosomal recessive Autosomal dominant X-linked recessive X-linked dominant Codominant
Mitochondrial
X syndrome
Notes
Cystic fibrosis disease affecting the mucus lining of the lungs, leading to breathing problems and other difficulties Huntington disease - or Huntington's chorea is an inherited disorder characterized by abnormal body movements called chorea, and loss of memory. There also is evidence that doctors as far back as the Middle Ages knew of this devastating disease. The incidence is 5 to 8 per 100,000. It takes its name from the New York physician George Huntington who first described it precisely in 1872.
Notes
Hemophilia-illness that impair the body's ability to control bleeding. Fragile X syndrome - is a genetic condition that causes a range of developmental problems including learning disabilities and mental retardation. Usually males are more severely affected by this disorder than females. In addition to learning difficulties, affected males tend to be restless, fidgety, and inattentive. Affected males also have characteristic physical features that become more apparent with age.
Notes -cont
DNA - a pair of molecules joined by hydrogen bonds: it is
organized as two complementary strands, head-to-toe, with the hydrogen bonds between them. Each strand of DNA is a chain of chemical "building blocks", called nucleotides, of which there are four types: adenine (abbreviated A), cytozyne (C), guanine (G) and thymine (T).
Mitochondria, which are structures in each cell that convert molecules into energy, each contain a small amount of DNA.
A chromatid forms one part of a chromosome after it has coalesced for the process of mitosis or meiosis. During either process, the word "chromosome" indicates a pair of two exactly identical ("sister") chromatids joined at the central point of each chromatid, called the centromere.
Notes -cont
Mitosis is the process by which a cell separates its duplicated genome into two identical halves Meiosis is the process that transforms one diploid into four haploid cells. Reciprocal cross a cross, with the phenotype of each sex reversed as compared with the original cross, to test the role of parental sex on inheritance pattern. A pair of crosses of the type genotype A(female) X genotype B(male) and genotype B(female) X genotype A(male).
Hardy-Weinberg Principle
Hardy-Weinberg - original proportions of genotypes in a population will remain constant from generation to generation
Sexual reproduction (meiosis and fertilization) alone will not change allelic (genotypic) proportions. p+q = 1 (always two alleles)
Hardy-Weinberg Principle
Necessary assumptions
Allelic frequencies would remain constant if population size is very large random mating no mutation no gene input from external sources no selection occurring
REVIEW
HOW TO USE THE HARDY WEINBERG PRINCIPLE HUMAN DNA MODERN GENETIC TECHNIQUES
Before proceeding to the ABO BLOOD GROUPING let us recall the Ag Ab reactions
IMMUNOGLOBULINS
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IgG is the only immunoglobulin that can cross the placenta in humans and protect the infant during the first months of life. IgG molecules are capable of binding complement by the classical pathway (except for the IgG4, which activate by the alternative pathway).
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IgM has a pentameric structure consisting of five monomer units linked by a J chain and by disulfide bonds at the Fc fragment.
IgM is easily dissociated by reducing agents, forming five monomeric units.
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IgM is the only antibody made to certain carbohydrate antigens, such as the ABO blood group antigens on human erythrocytes.
IgM is the most efficient immunoglobulin at activating complement in lytic reactions.
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In prozone or postzone effect the lattice formation and subsequent agglutination may not occur in the test system, leading to the assumption of false negative results.
To correct the problem of excessive Ab, the serum may be diluted with each serial dilution of serum tested against red cells.
To correct the problem of excessive Ag, the serum to cell-ratio in the test system may be in which will tend to increase the number of Abs available to bind with red cell.
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The ideal pH is between 6.5 and 7.5, exceptions to this range include some examples of Anti-M, and some Abs of the Pr (SP1) group which show stronger reactivity below pH 6.5.
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Why is it important?
ABO compatibility between donor cell and patient serum is the essential foundation of pretransfusion testing It is the only system with expected antibodies Whether they are IgG or IgM, ABO antibodies can activate complement readily
This means that incompatibilities can cause life threatening situations (transfusion reactions)
ABO antigens:
Biochemical & Genetic Considerations
Location
The presence or absence of the ABH antigens on the red blood cell membrane is controlled by the H gene The presence or absence of the ABH antigens in secretions is indirectly controlled by the Se gene
H Antigen
The H gene codes for an enzyme that adds the sugar fucose to the terminal sugar of a precursor substance (PS) The precursor substance (proteins and lipids) is formed on an oligosaccharide chain (the basic structure)
Glucose
H antigen
Fucose
H antigen
The H antigen is the foundation upon which A and B antigens are built A and B genes code for enzymes that add an immunodominant sugar to the H antigen
Immunodominant sugars are present at the terminal ends of the chains and confer the ABO antigen specificity
A and B Antigen
The A gene codes for an enzyme (transferase) that adds N-acetylgalactosamine to the terminal sugar of the H antigen
N-acetylgalactosaminyltransferase
The B gene codes for an enzyme that adds D-galactose to the terminal sugar of the H antigen
D-galactosyltransferase
Fucose
Fucose
Genetics
The H antigen is found on the RBC when you have the Hh or HH genotype, but NOT from the hh genotype The A antigen is found on the RBC when you have the Hh, HH, and A/A, A/O, or A/B genotypes The B antigen is found on the RBC when you have the Hh, HH, and B/B, B/O, or A/B genotypes
H antigen
Certain blood types possess more H antigen than others:
Greatest amount of H
O>A2>B>A2B>A1>A1B
Least amount of H
Why do Group O individuals have more H antigen than the other groups?
Group O individuals have no A or B genes to convert the H antigen to A or B antigens.that means more H antigen sites
A A Group O
A A
Group A
Most of the H antigen sites in a Group A individual have been converted to the A antigen
Secretor Status
The secretor gene consists of 2 alleles (Se and se) The Se gene is responsible for the expression of the H antigen on glycoprotein structures located in body secretions If the Se allele is inherited as SeSe or Sese, the person is called a secretor
80% of the population are secretors
Secretors
Secretors express soluble forms of the H antigen in secretions that can then be converted to A or B antigens (by the transferases) Individuals who inherit the sese gene are called nonsecretors The se allele is an amorph (nothing expressed) sese individuals do not convert antigen precursors to H antigen and has neither soluble H antigen nor soluble A or B antigens in body fluids
B antigen
se gene (sese)
ABO Group
Secretors (SeSe or Sese):
A B O
ABH Substances
A
+++ 0 0
B
0 +++ 0
H
+ + +++
AB
Non-secretors (sese):
+++
+++
A, B, O, and AB
Lewis (Le)
The Lewis Blood Group System is mentioned here because it is related to secretor status Lewis antigens are plasma antigens formed by tissues and are released into plasma where they adsorb onto the RBCs (they are not an integral part of the RBC membrane) Consists of 2 antigens
Lea Leb
Lewis
Lea and Leb are a single gene (Le) and its amorph (le) Lea is a precursor to Leb The Le gene codes for a transferase, which attaches L-fucose to the precursor chain to form the Lea antigen (designated Le(a+b-) If the H and Se genes are inherited, the Lea is converted to Leb and is designated Le(a-b+) In childhood, both may be on the RBC, Le(a+b+) If a person is lele, they will have no Lewis antigens in plasma or on red blood cells
ABO Subgroups
ABO subgroups differ in the amount of antigen present on the red blood cell membrane Subgroups have less antigen Subgroups are the result of less effective enzymes. They are not as efficient in converting H antigens to A or B antigens (fewer antigens are present on the RBC) Subgroups of A are more common than subgroups of B
Subgroups of A
The 2 principle subgroups of A are: A1 and A2 Both react strongly with reagent anti-A To distinguish A1 from A2 red cells, the lectin Dolichos biflorus is used (anti-A1) 80% of group A or AB individuals are subgroup A1 20% are A2 and A2B
A2 Phenotype
Why is the A2 phenotype important? A2 and A2B individuals may produce an anti-A1 This may cause discrepancies when a crossmatch is done (incompatibility) Whats the difference between the A1 and A2 antigen? Its quantitative The A2 gene doesnt convert the H to A very well The result is fewer A2 antigen sites compared to the many A1 antigen sites
A1 and A2 Subgroups*
Anti-A Anti-A1 Anti-H antisera antisera lectin ABO antibodies in serum # of antigen sites per RBC
A1
A2
4+
4+
4+
0
0
3+
Anti-B
Anti-B & anti-A1
900 x103
250 x103
Other A subgroups
There are other additional subgroups of A Aint (intermediate), A3, Ax, Am, Aend, Ael, Abantu A3 red cells cause mixed field agglutination when polyclonal anti-A or anti-A,B is used Mixed field agglutination appears as small agglutinates with a background of unagglutinated RBCs They may contain anti-A1
B Subgroups
B subgroups occur less than A subgroups B subgroups are differentiated by the type of reaction with anti-B, anti-A,B, and anti-H B3, Bx, Bm, and Bel
Bombay
The hh causes NO H antigen to be produced Results in RBCs with no H, A, or B antigen (patient types as O) Bombay RBCs are NOT agglutinated with anti-A, anti-B, or anti-H (no antigens present) Bombay serum has strong anti-A, anti-B and anti-H, agglutinating ALL ABO blood groups What blood ABO blood group would you use to transfuse this patient??
ANSWER:
Another Bombay
Group O RBCs cannot be given because they still have the H antigen You have to transfuse the patient with blood that contains NO H antigen
Landsteiners Rule:
Normal, Healthy individuals possess ABO antibodies to the ABO antigen absent from their RBCs
ABO
Remember:
The ABO Blood Group System does NOT require the presence of a foreign red blood cell for the production of ABO antibodies ABO antibodies are non-red blood cell stimulated probably from environmental exposure and are referred to as expected antibodies
ABO antibodies
group A serum contains anti-B group B serum contains anti-A group AB serum contains no antibodies group O serum contains anti-A, anti-B, and anti-A,B
Anti-A1
Group O and B individuals contain anti-A in their serum However, the anti-A can be separated into different components: anti-A and anti-A1 Anti-A1 only agglutinates the A1 antigen, not the A2 antigen There is no anti-A2.
Anti-A,B
Found in the serum of group O individuals Reacts with A, B, and AB cells Predominately IgG, with small portions being IgM Anti-A,B is one antibody, it is not a mixture of anti-A and anti-B antibodies
ABO antibodies
IgM is the predominant antibody in Group A and Group B individuals
Anti-A Anti-B
ABO Antibodies
Usually present within the first 3-6 months of life Stable by ages 5-6 years Decline in older age Newborns may passively acquire maternal antibodies (IgG crosses placenta) Reverse grouping (with serum) should not be performed on newborns or cord blood
Nature of antibodies
Non-red blood cell stimulated (previously discussed) ABO antibodies Red blood cell stimulated Antibodies formed as a result of transfusion, etc Usually IgG Active at 37C Can occur in group O (may occur in group A or B) These antibodies also occur in the other Blood Group Systems
Laboratory Testing:
ABO typing
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Antigen Present A
B
Antigen Missing B
A
O
AB
None
A and B
A and B
None
anti-A
anti-B
A cells
B cells
1 2
3 4
0 +
0 +
0 0
+ +
+ 0
+ 0
+ +
0 0
ABO group O
A
B AB
Pathologic fluids
Pleural Peritoneal Pericardial Ovarian cyst
94
Group O
Generally the most common blood group Genotype: OO Antigen: H Antibodies: anti-A, anti-B, and anti-A,B Antibodies are naturally occurring and very strong Anti-A,B (mostly IgG) may cross placenta to cause HDFN
95
Group A
Genotype: AA, AO Antigen: A, H Antibodies: anti-B (primarily IgM) A subgroups A1 (80%) and A2 (20%) most important A1 has more A than A2 (quantitative difference); qualitative differences, too. ~25% of A2Bs form anti-A1 1-8% of A2s form anti-A1 Lectin of Dolichos biflorus agglutinates A1
96
Group B
Genotype: BB, BO Antigen: B, H Antibodies: anti-A (primarily IgM) B subgroups: Not important
97
Group AB
Genotype: AB Antigen: A, B, very little H Antibodies: None B subgroups: Not important A2B: 25% of A2B individuals produce anti-A1
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98
ABO Testing
Cell typing (forward grouping) to determine antigen types on RBCs Serum/plasma typing (reverse grouping or backtyping) to determine type of antibody in serum: Note the opposite reactions If the forward reactions are opposite of reverse, an ABO discrepancy is not present.
99
100
101
Forward Grouping
Reagent: Monoclonal antibody Highly specific IgM Expected 3+- to 4+ reaction 1 drop Anti-A=Blue; anti-B=Yellow (Acroflavin dye) A and B antigens on patient red cells are agglutinated by known sera (anti-A, anti-B)
102
103
104
105
106
107
108
109
110
Step 4: Add one drop of 2-5% suspension of patient RBC to each tube.
111
112
113
114
115
116
Back Typing
To determine what antibodies are present in patients plasma.
117
118
119
120
121
122
123
124
125
126
127
Exercises
Interpretation of test results
128
?? ??
4+
4+
??
129
4+ 0 4+ 0
0 4+ 4+ 0
0 4+ 0 4+
4+ 0 0 4+
A B AB O
130
131
Antigen Problems
Lack of expected antigens A subgroup B subgroup Bombay Presence of unexpected antigens Acquired B phenotype Polyagglutinable RBCs, recent marrow transplant, nonspecific agglutination
132
Antibody problems
Lack of expected antibodies Immunodeficiency, neonates, abnormally high concentrations of Ab (prozone) Presence of unexpected antibodies Anti-A1, cold auto-or alloantibodies, rouleaux (false positive)
133
A Subgroups
A1 A2 A3 Ax Aend Am etc
134
A1 vs A2 Phenotypes
Blood Group A1 (80%) A2 (20%) Anti-A + + Anti-A1 lectin + 0
135
A1vs A2 Phenotypes
Quantitative differences: More antigenic sites on A1 than A2. Qualitative differences between A1 and A2 antigens:
1-8% of A2 individuals produce anti-A1 25% of A2B individuals produce anti-A1.
136
B Subgroups
Very rare and are less frequent than A subgroups. B subgroups demonstrate variations in the strength of the reaction using antiB and anti-A,B
137
Acquired B phenotype
Occurs in type A individuals with: Colon cancer, intestinal obstruction, gram negative sepsis Bacteria deacetylate group A sugar (GalNAc); remaining galactosamine crossreacts with reagent anti-B.
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Acquired B phenotype
139
Acquired B phenotype
AB forward (with weak reactions with reagent anti-B) A reverse Reaction with anti-B is negative, if: Acidify serum Acetic anhydride treatment Auto incubation
140
Reverse
A1 cells B cells
4+ 1-2+ AB
AB
4+
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142
143
Antigens on rbcs
A B A,B None
Antibodies in Plasma
Anti-B Anti-A None Anti-A, Anti-B
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Exercise
Blood Type A B AB Compatible RBCs ___ ___ ___ Compatible FFPs ___ ___ ___ Compatible Whole Blood ___ ___ ___
___
___
___
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Compatible RBCs
A, O B, O AB, A, B, O O
Compatible FFPs
A, AB B, AB AB A, B, AB, O
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12/11/2011
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150
151
Background information
The Kell blood group system was discovered in 1946. Number of Kell antigens: > 20 These antigens are the third most potent, after those of the ABO and Rh blood groups, at triggering an immune reaction.
Molecular information
The KEL gene is found on chromosome 7 The KEL gene is highly polymorphic, with different alleles at this locus encoding the 25 antigens that define the Kell blood group. The Kell protein is a polypeptide chain of 732 amino acids in length that becomes glycosylated at five different sites. It makes a single pass through the RBC membrane.
XK Gene (Chromosome X)
KEL Gene
RBC
Kx
Kx Substance
Kx substance is present on RBCs & WBCs Kell genes convert Kx substance into the Kell Ags on RBCs Kell genes do not convert Kx on WBCs
Absence of Kx proteins in RBCs membrane lead to McLeod Phenotype This absence cause:
McLeod Phenotype
Kx
Kell Antibodies
K- individuals produce anti-K when exposed to K+ cells
Frequency of K is low (9%), easy to find compatible blood for the patient with anti-k.
Extravascular Yes
Intravascular Rare
Fy(a-b-) blacks do not produce anti-Fya or anti-Fyb following transfusion with Fy(a+) or Fy(b+) blood Fy(a-b-) Caucasians become sensitized following transfusion with Fy(a+) or Fy(b+) blood This suggest that Fy(a-b-) phenotype arises from different genes in the two populations
Different genes
Duffy Antigens
Fya, Fyb antigens are Destroyed by enzymes Abs DO NOT agglutinate enzyme treated cells Moderately immunogenic.
Duffy Antibodies
Duffy Abs
IgG antibodies and can activate complement Anti- Fya is more frequently encountered Anti- Fyb is more frequently found in patients produced multiple alloantibodies
Clinically Significant Yes Thermal range 4 - 37 Abs class
Yes
Yes
Abs are of IgG type & can activate complement (Anti-Jka, Anti-Jkb ) Produced following transfusion or pregnancy Can cause HDNB They are also a very common cause of delayed HTRs
MN Genetics
MN Locus genes produce Glycophorin A (GPA) M-GPAs 1st five aas = Serine-Ser-Thr-ThrGlycine N-GPAs 1st five aas = Leucine-Ser-Thr-ThrGlutamic acid Amino acids (aa) 2, 3 & 4 are the same for both Glycophorin A (GPA) is a glycoprotein also known as MN-sialoglycoprotein
Genetics: These genes code for enzymes that sequentially add sugars to precursor substance. This system is related to the ABO, Le and Ii systems. Genes: P1, Pk, P and lower case p (silent allele) All antigens are expressed on glycolipids on red cells
P1, P P P, Pk Pk
N/A
Pk1 Pk2
p
Pk is the precursor of P.
Rare individuals do not convert Pk into P. Those will have Pk on RBCs.
Anti-P1 Antibodies
Naturally occcurring Abs found in the serum of P2 Individuals
Anti-P1 Abs
Clinically Significant occasionally Thermal range HDNB Abs class
IgM
4 22
Rare 22-37
Yes
Abs class
IgM Rare IgG
HDNB
Rare
It is an IgG biphasic Ab associated with Paroxysmal Cold Hemoglobinuria (PCH) Binds complement at cold temperatures and activates that complement in warm temperatures lysing the red blood cells.
IgG
Binds at 0
Hemolysis 37
Rare
Combination of anti-P, anti-P1 & anti-Pk Found in serum of individuals who have no P, P1 & Pk Ags on red cells