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MARK E. PATZKOWSKY
Department of Geosciences, The Pennsylvania State University, University Park, PA 16802
PALAIOS, 2001, V. 16, p. 444–460 represented by the modern world. In contrast, although
there are limitations imposed by taphonomy and strati-
The aim of this study was to determine whether biotic as- graphic resolution (Kidwell and Flessa, 1995; Martin,
sociations of Pennsylvanian-Permian brachiopods and bi- 1999 and references therein), paleoecologists can examine
valves from the northern Midcontinent differ in their degree the fossil record of biological communities through time.
of recurrence through time. The study interval includes 2.5 The aim of this paper is to identify and characterize the
Myr that can be divided into 5 full and 2 partial composite consistency of species associations through time using
depositional sequences separated by subaerial unconformi- Pennsylvanian-Permian bivalves and brachiopods of the
ties. These stratigraphic packages represent replicate natu- North American Midcontinent as a case study.
ral experiments in establishing the benthic marine ecosys- Recent paleoecological studies of marine invertebrates
tem of the basin. Based on cluster and ordination analyses, (e.g., Brett and Baird, 1995; Westrop, 1996; Tang and Bo-
two discrete biofacies can be recognized—one dominated by ttjer, 1996; Patzkowsky and Holland, 1997; Olszewski and
brachiopods and the other by bivalves. Within each of these, Patzkowsky, in press) have focused on compositional
environmental gradients can be recognized. The brachio- change at the scale of entire basins, combining taxonomic
pod gradient is interpreted to reflect the degree of water-col- lists from a variety of environments. In this study, the fo-
umn oxygenation, whereas the bivalve gradient is interpret- cus is on changes within biofacies rather than the entire
ed to reflect the transition from restricted to open-marine basin. Cluster analysis has been used to define paleocom-
conditions. Comparison of measured recurrence with ran- munity types, gradient analysis to examine inter-specific
domized data indicates that the ecological segregation of associations within paleocommunity types, and recur-
the two biofacies is maintained to a significant degree rence analysis to test for changes in associations through
through the succession of depositional sequences in the time. In order to put the results in a broader context, they
study interval. In contrast, the gradients within each bio- are compared with those of other recent studies covering
facies, although recognizable, are not maintained rigidly different groups, environments, and ages (Bennington
from sequence to sequence. There is also no significant dif- and Bambach, 1996; Holterhoff, 1996; Pandolfi, 1996).
ference in gradient recurrence between the two biofacies.
These results imply that there is no need to call upon strong STRATIGRAPHIC FRAMEWORK
interspecific interactions to maintain the structure of these
paleocommunities through time. This study focuses on a 2.5-Myr interval of late Pennsyl-
vanian to early Permian rocks (Fig. 1) of the northern Mid-
continent (Fig. 2). At this time of global ‘‘icehouse’’ climatic
INTRODUCTION conditions (Fischer, 1984), an ice sheet was present at the
south pole (Ziegler et al., 1997), leading to cyclical eustatic
A question of long-standing interest to ecologists and and climatic changes analogous in frequency, amplitude,
paleoecologists concerns the degree of integration in bio- and effect to those of the Quaternary (Veevers and Powell,
logical communities (Jackson, 1994). This issue frequently 1987). These are reflected in the cyclothemic stratigraphy
is cast as a debate between advocates of strong interde- of Pennsylvanian-Permian rocks in the Midcontinent
pendence of species (Clements, 1916) and strong indepen- (Heckel, 1984, 1986, 1995).
dence of species (Gleason, 1926). Ecologists have tested Cyclicity occurs at two scales in the study interval. At
these alternative hypotheses by examining how species the finest resolution, meter-scale cycles occur in both
compositions change along environmental gradients open-marine, platform settings and nearshore, coastal set-
(Whittaker, 1967). In a Clementsian world, species com- tings (Miller and West, 1993; Miller et al., 1996; Olszew-
position and abundance are expected to be very consistent ski, 2000). These cycles are very thin (1 to 5 m), unconfor-
over a range of environmental conditions because the spe- mity-bounded depositional sequences and, therefore, rep-
cies that make up a community form an integrated entity resent temporally significant packets of rock (Posamentier
(Ricklefs, 1990). In a Gleasonian world, species composi- et al., 1988; Van Wagoner et al., 1988) averaging 50,000
tion and abundance should vary from site to site as condi- years or less in duration.
tions change because every species reacts to environmen- At a larger scale (that of the classical cyclothems), com-
tal change independently (Ricklefs, 1990). Ecologists gen- posite depositional sequences, composed of 8 to 13 meter-
erally study species associations in the single time slice scale cycles, can be recognized (Miller and West, 1993,
Copyright Q 2001, SEPM (Society for Sedimentary Geology) 0883-1351/01/0016-0444/$3.00
PALEOCOMMUNITY RECURRENCE 445
DATA
Data consist of fossil bivalve and articulate brachiopod
collections (plus the calcareous inarticulate genus Petro-
crania) from two sources: 341 collections from Mudge and
Yochelson’s (1962) monograph on the stratigraphy and pa-
leontology of the Pennsylvanian-Permian Midcontinent
and 132 additional collections made in 1997 through 1999
(‘‘new collections’’). Each collection represents the assem-
blage of fossils found in a bed at a site; they were not com-
bined to create composite lists by geologic unit or location.
The entire data set is included in Olszewski (2000) and
can be accessed at the Pennsylvania State University’s
Electronic Theses and Dissertations website (http://
etda.libraries.psu.edu/).
FIGURE 1—Stratigraphic study interval. Stratigraphic column modified All fossils were identified to as fine a taxonomic level as
from Zeller (1968) and Baars et al. (1994). Roman numerals denote possible. Although many specimens were identifiable to
composite depositional sequences. I through V are complete sequenc- species, a large proportion could only be determined to ge-
es. 0 and VI are partial sequences.
nus. Therefore, to make use of as much data as possible,
all statistical analyses were conducted at the genus level.
This choice did not have a strong influence on patterns of
1998; Olszewski, 2000). Open-marine carbonates, marine ecological association for two reasons. First, most genera
mudrocks, and condensed sections dominate their trans- in the study interval are monospecific. Second, most poly-
gressive and early highstand phases. Late highstand de- specific genera in the data set are dominated by one spe-
posits include peritidal carbonates, deltaic sandstones, cies. For example, in Mudge and Yochelson’s (1962) data,
and pedogenic mudrocks. Correlation of meter-scale cycles Neospirifer is reported 116 times: 38 as N. sp. indet., 7 as
reveals angular unconformities at the boundaries of com- N. cf. N. kansasensis, and 71 as N. dunbari. If the propor-
posite sequences (Olszewski, 2000), indicating that these tion of 7 to 71 is representative of the relative frequency of
too are temporally significant packages of rock. these two species, then only 11 of the 116 Neospirifer oc-
The 51 meter-scale cycles identified in the study inter- currences are expected to be N. cf. N. kansasensis. These
val (Olszewski, 2000) provide a means of examining figures, which are typical of other genera as well, indicate
trends in paleoecological communities at relatively high that the number of associations gained by using genera
temporal resolution (;5·104 year). The five complete and rather than species provides more information (in a statis-
two partial composite sequences (Fig. 1) are separated by tical sense) than including many rare species and reject-
extensive subaerial unconformities. This means that their ing specimens not identified to the species level.
deposition required re-establishment of marine environ- Because the interest of this study was in associations of
446 OLSZEWSKI & PATZKOWSKY
TABLE 1—Descriptive statistics of data subsets. S is the richness of collections included in each data subset. ‘‘New collections’’ are those
made for this study and added to those of Mudge and Yochelson (1962). ‘‘All collections’’ denotes Mudge and Yochelson (1962) collections
plus ‘‘new collections.’’ ‘‘All genera’’ indicates inclusion of both brachiopod and bivalve genera (as opposed to just one group or the other). An
occurrence denotes the presence of a taxon in a collection regardless of its abundance. In a presence–absence data matrix, where 1 indicates
presence and 0 indicates absence, the total number of occurrences is simply the sum of the matrix (i.e., the number of 1’s).
two or more taxa, collections including only one taxon equal to 5 and median number of specimens equal to 21
were not included in statistical analyses. The final data (Fig. 3). Although their small sizes suggest that many tax-
set of 474 collections includes a total of 18,737 specimens onomic lists may not be complete, the large number of col-
and 2,593 occurrences (Table 1). lections reduces statistical uncertainty.
The geographic and stratigraphic distribution of collec- Collections were taken from a wide variety of lithologies
tions is summarized in Table 2 for seven north-south geo- and taphonomic states. Some collections came from hard
graphic zones (Fig. 2) of about 48 km each (five townships limestone, from which specimens had to be removed with
or about 30 miles) and the five complete composite se- chisel and hammer or examined on slab surfaces, whereas
quences. Four hundred and twenty-four collections are in- others came from soft mudrocks, which could be easily
cluded in the table, leaving 50 unassigned. Seven of these bulk sampled or surface collected. Some fossils occurred as
came from Nebraska, thirty-eight came from the two par- original shell material while others were molds (some-
tial composite sequences (marked 0 and VI in Fig. 1), and times in the same collection). In addition, collections most
five came from stratigraphically floating exposures. These certainly represent different amounts of time-averaging
collections were included in ordination and cluster analy- (Kidwell and Bosence, 1991; Brett, 1995); some come from
ses despite uncertain external information because they condensed intervals within meter-scale cycles represent-
still shed light on taxonomic associations. Although con- ing 100’s to 1000’s of years, whereas others come from fa-
tingency table analysis indicates that collections are not cies that represent relatively rapid burial.
distributed randomly (Gadj(df 5 24) 5 54.45, P 5 0.00037; So- Although all these non-uniform factors increase vari-
kal and Rohlf, 1995), no stratigraphic or geographic trends ability, the collections are reliable as records of fossil taxa
are evident in Table 2. that demonstrably co-occur in specific beds at specific lo-
Most of the collections are small with median richness cations. As such, they provide a great deal of information
TABLE 2—Distribution of collections used in this study by geographic zone and composite sequence. Values are ‘‘all collections’’ with S $ 2
(Table 1). Numbers in parentheses are ‘‘new collections’’, S $ 2. The distributions of Mudge and Yochelson’s (1962) collections and ‘‘new
collections’’ are significantly correlated (r 5 0.738 . r950.05 5 0.334; df 5 33).
Geographic zones
Composite sequences 1 2 3 4 5 6 7 Row totals
Ordination Analysis
As a complement to cluster analysis, the data were or-
dinated using correspondence analysis. Ordination helps
to reveal gradients that can be broken up artificially by
clustering, and orders taxa and collections less arbitrarily
than they are depicted by a dendrogram. In addition, or-
dination expresses multidimensional relationships more
effectively than cluster analysis.
Correspondence analysis was chosen for two reasons.
First, Kenkel and Orlóci (1986) found it to be very effective
at extracting known patterns in artificial ecological data
compared to other ordination techniques. Second, corre-
spondence analysis ordinates both taxa and collections in
the same multivariate space (i.e., both R- and Q-mode
analyses are conducted simultaneously), which allows the
two to be directly related (Jongmann et al., 1995).
A disadvantage of correspondence analysis is that it can
produce an ‘‘arch’’ effect. This is the result of compression
at the ends of ordination axes and a systematic, often qua-
dratic, relationship between axes. These problems can be
corrected by non-linear rescaling (Hill and Gauch, 1980),
but we chose not to do so for several reasons. First, non-
linear detrending is a ‘‘brute force’’ re-adjustment of the
pattern that often can lead to loss of ecologically meaning-
ful information (Pielou, 1984). If patterns are readily in-
terpretable, as is the case in the present analyses, there is
no need for adjustment. Second, Minchin (1987) and Ken-
kel and Orlóci (1986) found that non-linear detrending of-
ten does not improve simulated patterns and can even ex-
acerbate distortion of the ordination space. Ter Braak
(1995) provides a more comprehensive discussion of these
issues, including their mathematical basis and recom-
mended solutions.
Analyzing both brachiopods and bivalves together (Fig.
7A) reveals that they are segregated strongly in ordina-
tion space. Almost all brachiopod genera have positive val-
ues, while the bivalves are negative without exception.
Demarcating the R-mode clusters of genera from figure 4
on the ordination shows that results of the two analyses
are quite consistent. Note that, although the cluster
marked ‘‘Rare Taxa’’ appears to sit within the brachiopod
cluster, it is separated in higher ordination dimensions
where it is pulled out of the plane defined by the ‘‘Bivalve
Dominated’’ and ‘‘Brachiopod Dominated’’ clusters. The
slight overlap of bivalve and brachiopod genera involves
the bivalves Wilkingia (taxon 40) and Pteronites (taxon 3),
and the brachiopod Juresania (taxon 16) (the other taxa in
the region of overlap are rare and, therefore, their posi-
tions in ordination space are constrained poorly and pro-
vide limited information on their relationships). This is
consistent with direct observations in the field, where
Wilkingia and Pteronites are often the only bivalves in a
collection otherwise dominated by brachiopods and other
FIGURE 5—Two-way cluster analysis of ‘‘new collections’’ with S $
2 (key to genera as in Fig. 7); B 5 brachiopod, C 5 bivalve. External open-marine groups, and where Juresania seems to be
data for collections includes composite sequence (Roman numerals) characteristic of nearshore environments otherwise domi-
and lithology (s 5 siliciclastic, c 5 carbonate).
450 OLSZEWSKI & PATZKOWSKY
Recurrence Analysis
In addition to exploratory methods, tests were also con-
ducted for stratigraphic recurrence of paleoecologic asso-
ciations using methods similar to those described by
Clarke and Warwick (1994; see also Ivany and Baumiller,
1998). Taxonomic associations in a set of fossil collections
can be described completely by an R-mode matrix of simi-
larity coefficients between every pair of taxa. Such a ma-
←
FIGURE 9—First axis correspondence analysis values for all collec-
tions (all genera, S $ 4) plotted against stratigraphic position. Crosses
represent individual collections, dots represent mean values for each
meter-scale cycle. Composite sequence boundaries are shown by dot-
ted lines. Gray stripe shows interpreted general trend of stronger bi-
valve influence at the base of each composite sequence followed by
increased brachiopod dominance upward.
PALEOCOMMUNITY RECURRENCE 453
←
FIGURE 10—First-axis correspondence-analysis values for all collec-
tions (brachiopod genera, S $ 2) plotted against stratigraphic position.
Crosses represent individual collections, dots represent mean values
for each meter-scale cycle. Composite sequence boundaries are
shown by dotted lines. Gray stripe shows interpreted general trend of
increasingly dysoxic faunal signatures through study interval.
454 OLSZEWSKI & PATZKOWSKY
trix was built using the Dice coefficient and all the collec-
tions (S$2) from each composite sequence. These are the
same data that were ordinated for each sequence (Fig. 11),
so they can be generally compared with the results of the
exploratory techniques. Such comparisons should not be
taken too literally because correspondence analysis, al-
though it is an effective means of visualizing complex pa-
leoecological patterns, does not make use of the Dice coef-
ficient. Recurrence of faunal associations was measured
by comparing the Dice coefficient matrices for each pair of
composite sequences using Spearman’s rank correlation
coefficient (r). Note that only taxa occurring in both se-
quences can be included using this approach.
The recurrence coefficients obtained in this manner can
be tested for significance, which measures whether the r
based on real data is significantly greater than if taxa
were distributed randomly among collections. Standard
significance tables for Spearman’s rank correlation coeffi-
cient are not valid in this case for two reasons. First, they
assume a null hypothesis of r 5 0, but non-random struc-
ture (i.e., r.0) can occur in similarity matrices (i.e., the R-
mode Dice matrices used here) due to differences in the
number of occurrences of different taxa, regardless of
whether there are any ecological associations. Second, un-
derlying distributions are not normal (Clarke and War-
wick, 1994). To deal with these issues, a randomization
approach was adopted (Crowley, 1992). The occurrences of
each taxon were randomized among all the collections for
each of two composite sequences. By doing so, the number
of occurrences of each genus did not change, just the dis-
tribution of co-occurrences between genera. Occurrences
were shuffled randomly within taxa until all collections
had at least one occurrence. Note that this loosens the re-
striction of at least two occurrences per collection in the
original data matrices and makes the test conservative in
recognizing recurrence by widening the calculated signifi-
cance values. After both data matrices intended for com-
parison were randomized, their similarity matrices and
correlation coefficient were calculated in the same manner
as the original data. This was performed 1000 times to
build a distribution of correlation coefficients, the top and
bottom 2.5% of which were used to determine the 95% sig-
nificance values. If the correlation coefficient from the real
data lies outside this range, the statistical null hypothesis
(i.e., that the degree of similarity between taxonomic as-
sociations in the two sequences being tested would be pos-
sible with just random associations of taxa) can be reject-
ed. In other words, if the recurrence coefficient lies outside
the 95% range, it is reasonably certain that there is a non-
random degree of recurrence of taxonomic associations be-
FIGURE 12—Randomized recurrence significance. Triangles,
tween sequences. squares, and circles indicate measured Spearman Rank Correlation
According to the randomization results (Fig. 12), the de- Coefficient using all genera (A), brachiopods (B), and bivalves (C),
gree of faunal association using all taxa (brachiopods and respectively. I-bars indicate 95% two-sided confidence intervals based
bivalves) is significantly recurrent (except for sequence I on randomized data. Roman numerals indicate composite sequences
versus IV). In contrast, the gradients within each group (Fig. 1). If the measured value falls outside the confidence interval,
then it is outside the expected degree of recurrence if genus associ-
are generally not recurrent. This suggests that the segre-
ations were random.
gation of bivalves and brachiopods is a real aspect of the
data set, while the faunal associations within each group
are weak. ing bivalve and brachiopod associations, the aim is to de-
Whether or not the correlation coefficients differ signif- termine whether one is more recurrent than the other. To
icantly from random associations, they still describe the test this, a bootstrap procedure was used (Efron and Tib-
amount of recurrence in the structure of the data, which shirani, 1991): rather than randomize the data matrices,
may differ between the two taxonomic groups. In compar- they were sampled with replacement by randomly picking
PALEOCOMMUNITY RECURRENCE 455
Summary of Results
These results are also consistent with the present study, factors (temperature, salinity, oxygenation, etc.) are un-
although a ‘‘no-analog’’ assemblage (Overpeck et al., 1992) clear.
unique to only one portion of a composite sequence has not (3) Testing for the recurrence of taxonomic associations
been recognized. Like the present results and those of each time marine conditions were re-established indicates
Bennington and Bambach (1996), none of Holterhoff’s that segregation of the biofacies is strongly recurrent, but
(1996) individual collections appear identical, although the order of species along gradients within the biofacies is
they do fall into distinct associations that recur from cycle not. The groups of genera defining the compositional gra-
to cycle. dients described above do roughly recur, but the specific
Lastly, Pandolfi (1996) examined Pleistocene coral-reef relationships among individual taxa do not.
assemblages from Papua New Guinea. He examined nine (4) With regard to stasis, a pattern of recurrent associa-
cycles over a 95-kyr period, comparable in resolution to tions within biofacies that is statistically distinguishable
the meter-scale cycles of the Midcontinent, but much finer from random taxonomic associations cannot be identified.
than Midcontinent composite sequences. At three differ- On the other hand, the segregation of the bivalve and bra-
ent locations, he measured transects from reef crest to reef chiopod biofacies is significantly recurrent, but probably
slope and compared assemblages from those two environ- reflects different environmental preferences between
ments from place to place and through time. He found these two groups rather than coevolutionary integration of
greater differences between locations than through time paleocommunities.
at any single location; this contrasts to other studies of
Quaternary terrestrial and level-bottom marine commu- ACKNOWLEDGMENTS
nities. As a result, Pandolfi (1996) suggested that coral-
reef dynamics distinctly differ from these other systems. This work was completed in partial fulfillment of T.D.
An important difference that Pandolfi (1996) points out Olszewski’s doctoral dissertation in the Department of
between his work and some other studies is the difference Geosciences, The Pennsylvania State University (avail-
in temporal scale—many other studies either focused on able through the Penn State Electronic Theses and Disser-
much shorter ecological time scales or much longer pale- tations website at: http://etda.libraries.psu.edu/). Discus-
ontological time scales. This led him to suggest that differ- sions with R.R. West and D.R. Boardman II in the field
ent patterns may be emerging at different scales of study. provided insights to the stratigraphy and paleoecology of
Although the temporal resolution used herein is signifi- the Midcontinent. Thanks to A.I. Miller and an anony-
cantly coarser than his, similarities are seen between Pan- mous reviewer for thoughtful and encouraging comments
dolfi’s (1996) results and the present investigation. Be- that helped to improve this article. Grants from the Na-
cause it was not possible to resample the same point on an tional Geographic Society, the Geological Society of Amer-
environmental gradient through time, results of the pre- ica, Sigma Xi, and the Krynine Fund of the Penn State De-
sent study only can be compared to his individual tran- partment of Geosciences made this work possible.
sects through time. However, if his three sites are consid-
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