Image Display and Exploration

Image Display and Exploration Image File I/O Image Types and Type Conversions Back to Top of Section Display and explore images Import and export images Convert between the various image types

Image Display and Exploration

immovie implay imshow imtool montage subimage Make movie from multiframe image Play movies, videos, or image sequences Display image Image Tool Display multiple image frames as rectangular montage Display multiple images in single figure

warp Display image as texture-mapped surface Back to Top of Section

Image File I/O

analyze75info analyze75read dicomanon dicomdict dicominfo dicomlookup dicomread dicomuid dicomwrite hdrread hdrwrite interfileinfo interfileread isrset makehdr nitfinfo nitfread openrset rsetwrite Read metadata from header file of Analyze 7.5 data set Read image data from image file of Analyze 7.5 data set Anonymize DICOM file Get or set active DICOM data dictionary Read metadata from DICOM message Find attribute in DICOM data dictionary Read DICOM image Generate DICOM unique identifier Write images as DICOM files Read high dynamic range (HDR) image Write Radiance high dynamic range (HDR) image file Read metadata from Interfile file Read images in Interfile format Check if file is R-Set Create high dynamic range image Read metadata from National Imagery Transmission Format (NITF) file Read image from NITF file Open R-Set file Create reduced resolution data set from image file

tonemap Render high dynamic range image for viewing Back to Top of Section

Image Types and Type Conversions

demosaic gray2ind grayslice graythresh im2bw Convert Bayer pattern encoded image to truecolor image Convert grayscale or binary image to indexed image Convert grayscale image to indexed image using multilevel thresholding Global image threshold using Otsu's method Convert image to binary image, based on threshold

im2double im2int16 im2java2d im2single im2uint16 im2uint8 ind2gray ind2rgb label2rgb mat2gray rgb2gray Back to Top

Convert image to double precision Convert image to 16-bit signed integers Convert image to Java buffered image Convert image to single precision Convert image to 16-bit unsigned integers Convert image to 8-bit unsigned integers Convert indexed image to grayscale image Convert indexed image to RGB image Convert label matrix into RGB image Convert matrix to grayscale image Convert RGB image or colormap to grayscale

GUI Tools
Modular Interactive Tools Navigational Tools for Image Scroll Panel Utilities for Interactive Tools Back to Top of Section Modular interactive tool creation functions Modular interactive navigational tools Modular interactive tool utility functions

Modular Interactive Tools

imageinfo imcontrast imdisplayrange imdistline impixelinfo impixelinfoval impixelregion Image Information tool Adjust Contrast tool Display Range tool Distance tool Pixel Information tool Pixel Information tool without text label Pixel Region tool

impixelregionpanel Pixel Region tool panel Back to Top of Section

Navigational Tools for Image Scroll Panel

immagbox imoverview imoverviewpanel Magnification box for scroll panel Overview tool for image displayed in scroll panel Overview tool panel for image displayed in scroll panel

imscrollpanel Scroll panel for interactive image navigation Back to Top of Section

Utilities for Interactive Tools

axes2pix getimage getimagemodel imattributes imellipse imfreehand imgca imgcf Convert axes coordinates to pixel coordinates Image data from axes Image model object from image object Information about image attributes Create draggable ellipse Create draggable freehand region Get handle to current axes containing image Get handle to current figure containing image

imgetfile imhandles imline impoint impoly imrect imroi iptaddcallback iptcheckhandle iptgetapi iptGetPointerBehavior ipticondir iptPointerManager iptremovecallback iptSetPointerBehavior iptwindowalign truesize Back to Top

Open Image dialog box Get all image handles Create draggable, resizable line Create draggable point Create draggable, resizable polygon Create draggable rectangle Region-of-interest (ROI) base class Add function handle to callback list Check validity of handle Get Application Programmer Interface (API) for handle Retrieve pointer behavior from HG object Directories containing IPT and MATLAB icons Create pointer manager in figure Delete function handle from callback list Store pointer behavior structure in Handle Graphics object Align figure windows Adjust display size of image

makeConstrainToRectFcn Create rectangularly bounded drag constraint function

Spatial Transformation and Image Registration

Spatial Transformations Image Registration Back to Top of Section Spatial transformation of images and multidimensional arrays Align two images using control points

Spatial Transformations
checkerboard findbounds fliptform imcrop impyramid imresize imrotate imtransform makeresampler maketform tformarray tformfwd Create checkerboard image Find output bounds for spatial transformation Flip input and output roles of TFORM structure Crop image Image pyramid reduction and expansion Resize image Rotate image Apply 2-D spatial transformation to image Create resampling structure Create spatial transformation structure (TFORM) Apply spatial transformation to N-D array Apply forward spatial transformation

tforminv Apply inverse spatial transformation Back to Top of Section

Image Registration
cp2tform cpcorr Infer spatial transformation from control point pairs Tune control-point locations using cross correlation

cpselect cpstruct2pairs imfuse imregconfig imregister imshowpair normxcorr2 registration.metric.MattesMutualInformation registration.metric.MeanSquares registration.optimizer.OnePlusOneEvolutionary

Control Point Selection Tool Convert CPSTRUCT to valid pairs of control points Composite of two images Configurations for intensity-based registration Intensity-based image registration Compare differences between images Normalized 2-D cross-correlation Mattes mutual information metric configuration object Mean square error metric configuration object One-plus-one evolutionary optimizer configuration object

registration.optimizer.RegularStepGradientDescent Regular step gradient descent optimizer configuration object Back to Top

Image Analysis and Statistics

Image Analysis Texture Analysis Pixel Values and Statistics Back to Top of Section Trace boundaries, detect edges, and perform quadtree decomposition Entropy, range, and standard deviation filtering; gray-level co-occurrence matrix Create histograms, contour plots, and get statistics on image regions

Image Analysis
bwboundaries bwtraceboundary corner cornermetric edge hough houghlines houghpeaks imfindcircles qtdecomp qtgetblk qtsetblk Trace region boundaries in binary image Trace object in binary image Find corner points in image Create corner metric matrix from image Find edges in grayscale image Hough transform Extract line segments based on Hough transform Identify peaks in Hough transform Find circles using circular Hough transform Quadtree decomposition Block values in quadtree decomposition Set block values in quadtree decomposition

viscircles Create circle Back to Top of Section

Texture Analysis
entropy entropyfilt graycomatrix graycoprops rangefilt Entropy of grayscale image Local entropy of grayscale image Create gray-level co-occurrence matrix from image Properties of gray-level co-occurrence matrix Local range of image

stdfilt Local standard deviation of image Back to Top of Section

Pixel Values and Statistics

corr2 imcontour imhist impixel improfile mean2 regionprops std2 Back to Top 2-D correlation coefficient Create contour plot of image data Display histogram of image data Pixel color values Pixel-value cross-sections along line segments Average or mean of matrix elements Measure properties of image regions Standard deviation of matrix elements

Image Arithmetic
imabsdiff imadd imapplymatrix imcomplement imdivide imlincomb immultiply imsubtract Back to Top Absolute difference of two images Add two images or add constant to image Linear combination of color channels Complement image Divide one image into another or divide image by constant Linear combination of images Multiply two images or multiply image by constant Subtract one image from another or subtract constant from image

Image Enhancement and Restoration

Image Enhancement Image Restoration (Deblurring) Back to Top of Section Histogram equalization, decorrelation stretching, and 2-D filtering Deconvolution for deblurring

Image Enhancement
adapthisteq decorrstretch histeq imadjust imnoise intlut medfilt2 ordfilt2 stretchlim Contrast-limited adaptive histogram equalization (CLAHE) Apply decorrelation stretch to multichannel image Enhance contrast using histogram equalization Adjust image intensity values or colormap Add noise to image Convert integer values using lookup table 2-D median filtering 2-D order-statistic filtering Find limits to contrast stretch image

wiener2 2-D adaptive noise-removal filtering Back to Top of Section

Image Restoration (Deblurring)

deconvblind deconvlucy deconvreg Deblur image using blind deconvolution Deblur image using Lucy-Richardson method Deblur image using regularized filter

deconvwnr edgetaper otf2psf psf2otf Back to Top

Deblur image using Wiener filter Taper discontinuities along image edges Convert optical transfer function to point-spread function Convert point-spread function to optical transfer function

Linear Filtering and Transforms

Linear Filtering Linear 2-D Filter Design Image Transforms Back to Top of Section Convolution, N-D filtering, and predefined 2-D filters 2-D FIR filters Fourier, Discrete Cosine, Radon, and Fan-beam transforms

Linear Filtering
convmtx2 fspecial 2-D convolution matrix Create predefined 2-D filter

imfilter N-D filtering of multidimensional images Back to Top of Section

Linear 2-D Filter Design

freqz2 fsamp2 ftrans2 fwind1 2-D frequency response 2-D FIR filter using frequency sampling 2-D FIR filter using frequency transformation 2-D FIR filter using 1-D window method

fwind2 2-D FIR filter using 2-D window method Back to Top of Section

Image Transforms
dct2 dctmtx fan2para fanbeam idct2 ifanbeam iradon para2fan phantom radon Back to Top 2-D discrete cosine transform Discrete cosine transform matrix Convert fan-beam projections to parallel-beam Fan-beam transform 2-D inverse discrete cosine transform Inverse fan-beam transform Inverse Radon transform Convert parallel-beam projections to fan-beam Create head phantom image Radon transform

Morphological Operations
Intensity and Binary Images Binary Images Dilate, erode, reconstruct, and perform other morphological operations Label, pack, and perform morphological operations on binary images

Structuring Element Creation and Manipulation Back to Top of Section

Create and manipulate structuring elements for morphological operations

Intensity and Binary Images

conndef imbothat imclearborder imclose imdilate imerode imextendedmax imextendedmin imfill imhmax imhmin imimposemin imopen imreconstruct imregionalmax imregionalmin imtophat Create connectivity array Bottom-hat filtering Suppress light structures connected to image border Morphologically close image Dilate image Erode image Extended-maxima transform Extended-minima transform Fill image regions and holes H-maxima transform H-minima transform Impose minima Morphologically open image Morphological reconstruction Regional maxima Regional minima Top-hat filtering

watershed Watershed transform Back to Top of Section

Binary Images
applylut bwarea bwareaopen bwconncomp bwconvhull bwdist bwdistgeodesic bweuler bwhitmiss bwlabel bwlabeln bwmorph bwpack bwperim bwselect bwulterode bwunpack graydist imtophat makelut Neighborhood operations on binary images using lookup tables Area of objects in binary image Morphologically open binary image (remove small objects) Find connected components in binary image Generate convex hull image from binary image Distance transform of binary image Geodesic distance transform of binary image Euler number of binary image Binary hit-miss operation Label connected components in 2-D binary image Label connected components in binary image Morphological operations on binary images Pack binary image Find perimeter of objects in binary image Select objects in binary image Ultimate erosion Unpack binary image Gray-weighted distance transform of grayscale image Top-hat filtering

Create lookup table for use with applylut Back to Top of Section

Structuring Element Creation and Manipulation

getheight getneighbors getnhood getsequence isflat reflect strel translate Back to Top Height of structuring element Structuring element neighbor locations and heights Structuring element neighborhood Sequence of decomposed structuring elements True for flat structuring element Reflect structuring element Create morphological structuring element (STREL) Translate structuring element (STREL)

ROI-Based, Neighborhood, and Block Processing

ROI-Based Processing Neighborhood and Block Processing Back to Top of Section Define regions of interest (ROI) and perform operations on them Define neighborhoods and blocks and process them

ROI-Based Processing
poly2mask roicolor roifill roifilt2 Convert region of interest (ROI) polygon to region mask Select region of interest (ROI) based on color Fill in specified region of interest (ROI) polygon in grayscale image Filter region of interest (ROI) in image

roipoly Specify polygonal region of interest (ROI) Back to Top of Section

Neighborhood and Block Processing

bestblk blockproc close (ImageAdapter) col2im colfilt im2col ImageAdapter nlfilter Determine optimal block size for block processing Distinct block processing for image Close ImageAdapter object Rearrange matrix columns into blocks Columnwise neighborhood operations Rearrange image blocks into columns Interface for image I/O General sliding-neighborhood operations

readRegion(ImageAdapter) Read region of image writeRegion(ImageAdapter) Write block of data to region of image Back to Top

Colormaps and Color Space

Color Space Conversions ICC profile-based device independent color space conversions and device-dependent color space conversions

Back to Top of Section

Color Space Conversions

applycform Apply device-independent color space transformation

iccfind iccread iccroot iccwrite isicc lab2double lab2uint16 lab2uint8 makecform ntsc2rgb rgb2ntsc rgb2ycbcr whitepoint xyz2double xyz2uint16 ycbcr2rgb Back to Top

Search for ICC profiles Read ICC profile Find system default ICC profile repository Write ICC color profile to disk file True for valid ICC color profile Convert L*a*b* data to double Convert L*a*b* data to uint16 Convert L*a*b* data to uint8 Create color transformation structure Convert NTSC values to RGB color space Convert RGB color values to NTSC color space Convert RGB color values to YCbCr color space XYZ color values of standard illuminants Convert XYZ color values to double Convert XYZ color values to uint16 Convert YCbCr color values to RGB color space

Utilities
Preferences Validation Mouse Array Operations Demos Performance Back to Top of Section Set and determine value of toolbox preferences Check input arguments and perform other common programming tasks Retrieve values of lines, points, and rectangles defined interactively using mouse Circularly shift pixel values and pad arrays Launch Image Processing Toolbox demos Check for presence of Intel Integrated Performance Primitives (Intel IPP) library

Preferences
iptgetpref iptprefs Get values of Image Processing Toolbox preferences Display Image Processing Preferences dialog box

iptsetpref Set Image Processing Toolbox preferences or display valid values Back to Top of Section

Validation
getrangefromclass iptcheckconn iptcheckinput iptcheckmap iptchecknargin iptcheckstrs Default display range of image based on its class Check validity of connectivity argument Check validity of array Check validity of colormap Check number of input arguments Check validity of option string

iptnum2ordinal Convert positive integer to ordinal string Back to Top of Section

Mouse
getline getpts Select polyline with mouse Specify points with mouse

getrect Specify rectangle with mouse Back to Top of Section

Array Operations
padarray Pad array Back to Top of Section

Demos
iptdemos Index of Image Processing Toolbox demos