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Worldwide Coverage: Optics, Lasers, Imaging, Fiber Optics, Electro-Optics, Photonics Component Manufacturing
www.Photonics.com
THE EMERGENCE OF MULTIMODAL NLO IMAGING
Cover1_Layout 1 11/1/11 9:56 AM Page 1
Bright Ideas in Fiberoptics
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www.photonics.com
10 BIOSCAN
BioPhotonics editors curate the most significant headlines
of the month for photonics in the life sciences and take
you deeper inside the news. Featured stories include:
DNA nanosensors pave way for cancer tests, drugs
STED microscopy reveals how immune system
attacks infected cells
Laser technique produces synthetic tissue
for regenerative medicine
21 BUSINESSSCAN
Photonics-related projects score NIH grants
NEWS
35
BioPhotonics November/December 2011
Volume 18 Issue 9
t
TABLE OF CONTENTS
24 TO LABEL OR NOT?
by Dr. Neil Anderson, Semrock Inc., a unit of Idex Corp.
The emerging field of multimodal nonlinear optical imaging, which
integrates label-based and label-free methods, could become the
definitive diagnostic tool of the future.
28 PHOTOCOAGULATION: HEALING THROUGH LASER DAMAGE
by Marie Freebody, Contributing Editor
Used in almost all surgical specialties, this decades-old method of containing
tissue damage has become especially important to ophthalmologists.
31 DIFFRACTION-IMAGING FLOW CYTOMETRY ENABLES RAPID CELL ASSAY
by Xin-Hua Hu, East Carolina University and Wavmed Technologies Corp.;
Yuanming Feng, Tianjin University; and Jun Qing Lu, East Carolina University
A novel method of combining flow cytometry with diffraction rather than fluores-
cence imaging enables 3-D visualization and suggests new applications in medicine.
35 CSI EXPERTS FIND CLUES FASTER WITH MICROSCOPY
by Marie Freebody, Contributing Editor
The field of forensics is being catalyzed by the efficiencies of digital imaging
and by combining optical techniques with spectroscopy and spectrophotometry.
38 INVERTED FLUORESCENCE MICROSCOPY AIDS MICROSEPARATION STUDIES
by Dr. Yolanda Fintschenko, Labsmith Inc., and Dr. Blanca Lapizco-Encinas,
Tennessee Technological University
This microscope has the stationary stage and software required by researchers
working with micro- or nanofluidic experiments.
FEATURES
NEWS
7 EDITORIAL
8 LETTERS
43 BREAKTHROUGHPRODUCTS
48 APPOINTMENTS
Upcoming Courses and Shows
49 ADVERTISER INDEX
50 POST SCRIPTS
by Laura S. Marshall
Genetic approach shows bright promise against AIDS
DEPARTMENTS
PHOTONICS
The technology of generating and harnessing light and other forms of radiant energy whose
quantum unit is the photon. The range of applications of photonics extends from energy generation
to detection to communications and information processing.
BIOPHOTONICS
The application of photonic products and techniques to solve problems for researchers,
product developers, clinical users, physicians and others in the fields of medicine,
biology and biotechnology.
This months cover is based
on an article about multimodal
nonlinear optical imaging.
Written by Dr. Neil Anderson
of Semrock Inc., it begins
on page 24. Design by Art
Director Suzanne L. Schmidt.
ND11_Contents_Layout 1 10/27/11 11:57 AM Page 4
nd11_OptBuildingBlocks_Pg5_Layout 1 10/27/11 10:33 AM Page 5
www.photonics.com
Group Publisher Karen A. Newman
Editorial Staff
Managing Editor Laura S. Marshall
Senior Editor Melinda A. Rose
Features Editor Lynn M. Savage
News Editors Gary Boas, Caren B. Les, Ashley N. Paddock,
Krista Zanolli
Contributing Editors Hank Hogan, Marie Freebody
Copy Editors Judith E. Storie, Patricia A. Vincent,
Margaret W. Bushee
Creative Staff
Senior Art Director Lisa N. Comstock
BioPhotonics Art Director Suzanne L. Schmidt
Designer Janice R. Tynan
Director of Publishing Operations Kathleen A. Alibozek
Electronic Media Staff
Director Charley Rose
Multimedia Services & Marketing
.NET Developers Brian L. LeMire, Alan W. Shepherd
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Subscription Policy BioPhotonics ISSN-1081-8693, (USPS 013913) is published 9 times per year by Laurin
Publishing Co. Inc. TITLE reg. in US Library of Congress. The issues will be as follows: January, February,
March, April, May/June, July/August, September, October, November/ December. Copyright 2011 by Lau-
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pressed in BioPhotonics are those of the contributors the publisher assumes no responsibility for them.
6 BioPhotonics November/December 2011
ND11_Masthead_Layout 1 10/27/11 10:10 AM Page 6
Enhance, Disrupt, Revolutionize, Repeat
I
n his introduction to a plenary session called Material
Nanoscience, Photonics and Technologies for Revolutionary
Innovation at LIAs ICALEO (International Congress on
Applications of Lasers & Electro-Optics) last month in Orlando,
Fla., session chairman Kunihiko Washio of Paradigm Laser
Research Ltd. in Tokyo said, Although incremental innovation
within a known systematic framework is very important for
steady technology progress, disruptive innovation is often desired
to push the limits of the imaginable and to leap forward to attain
revolutionary innovation.
Disruptive innovator Steve Jobs, the former Apple CEO,
changed the world with his computers and phones, and just one
day before he died last month at the age of 56, a press release
from the University of California, Davis, described an adaptation
to his iPhone that turned it into a microscope capable of both
revealing vital medical information and transmitting images for
analysis and diagnosis. I wonder if Jobs knew about the adapta-
tion. I wonder what he thought, if he knew, about his disruptive
phone being turned into a potentially game-changing device to
bring a new level of health care to the world.
The group at UC-Davis was not the first to build a smartphone
microscope, and it certainly wont be the last to add some good,
incremental innovation to an already great idea, whatever it may
be. And thats good for all of us. (You can read more about the
UC-Davis enhanced iPhone on photonics.com, http://www.
photonics.com/a48604.) Innovation of all kinds keeps an industry
growing, and thats pretty good, too.
In his introduction at ICALEO, Washio went on to say, Mate-
rials science, particularly material nanoscience, is believed to be
the treasure house of the seeds of desired disruptive innovations.
The keynote presentation that followed, The Story and Prospects
of Carbon Nanoscience and Technologies for Future Exciting
Applications by Stanford researcher Hongjie Dai, presented a
look at carbon nanotubes and their unique intrinsic physical
and chemical properties, which can be exploited for biological
and biomedical applications including detection, diagnostics,
imaging and novel therapy.
We cant wait to see where the next disruptive and incremental
biophotonics innovations will come from. In a small change of
our own, were going to focus a couple of articles in every issue
around a specific topic, exploring aspects of the subject that are
bringing real change to the way we think about biophotonics,
its applications and our world.
You might see an update on the smartphone microscope in
our September issue coverage of biophotonics and global health,
while Dais work on carbon nanotubes may make its way into
our March issue, with its focus on biophotonics and cancer. With
so much interesting work going on in photonics and the life
sciences, we wanted to organize it and bring it to you with some
sense of the impact it could have on the way we live. Well ex-
plore photonics in dentistry in January. In February, well take a
closer look at biophotonics in the pharmaceutical industry. Other
topics will be covered, too, and all the things you like about Bio-
Photonics will still be there, just enhanced. We hope you like it.
In the meantime, enjoy this issue, and make plans to visit us
at our booths at BiOS (8327) and Photonics West (323) in San
Francisco in January.
7
EDITORIAL
Karen A. Newman
karen.newman@photonics.com
BioPhotonics November/December 2011
ND11_Editorial_Layout 1 10/27/11 10:33 AM Page 7
8
The limits of diffraction limits
In your recent article on high-resolution
microscopy (July/August 2011, p. 31),
the heading asks, Can optical micros-
copy further shred the Abbe diffraction
limit? Although the statement about
shredding the Abbe diffraction limit often
is perpetuated by those working in the
field of STED [stimulated emission
depletion] microscopy, it is basically
wrong. The Abbe resolution criterion
(or Rayleigh, for that matter) is valid only for real imaging
systems like a microscope lens. It basically teaches us that, even
if the best optical materials are used in the lens manufacturing,
the resolution of the lens will be limited by diffraction of the
lens aperture.
The new, and impressive, scanning techniques like STED and
PALM [photoactivated localization microscopy] rely on a clever
interplay between fluorophores and sophisticated laser scanning
methods and, as such, are more related to raster scanning known
in scanning electron microscopes.
It is my hope that the erroneous comparison of classical imag-
ing and laser scanning methods will be avoided in the future.
Lars Ren Lindvold
Senior Scientist, Radiation Research Div.
Ris National Laboratory for Sustainable Energy
Technical University of Denmark
Letters
BioPhotonics November/December 2011
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BioPhotonics November/December 2011
Photonics Medias industry-leading site features the latest industry news and events
from around the world.
Welcome to
Web Exclusive:
Optogenetics using light to control geneti-
cally altered living cells began as a way
to probe neural code and reveal the secrets
of disorders in the still-mysterious human
brain. But teams at two universities are taking
their optogenetic work to heart, literally,
with the goal of replacing electrical pace-
makers. News Editor Caren Les asked
Stanfords Oscar Abilez and Stony Brook
University Medical Centers Emilia Entcheva
about the challenges they face and whats
next for their research. For more, visit:
www.photonics.com/webexclusives
2011 Prism Awards Finalists
Finalists for the 2011 Prism Awards for photonic innovation have
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entries from around the world, our prestigious panel of judges
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Sponsored by
pump
) the beams interact within the sam-
ple via a four-wave mixing process to gen-
erate the CARS signal at the new optical
frequency
CARS
= 2
pump
Stokes
. Both
the Stokes and pump beams are collinearly
BioPhotonics November/December 2011 25
Figure 2: Energy level diagrams that describe the nonlinear processes exploited in multimodal nonlinear optical imaging: (left to right) third-harmonic
generation (THG), second-harmonic generation (SHG), two-photon (2P) and coherent anti-Stokes Raman scattering (CARS). In the THG process, three photons
at wavelength are required to generate the THG signal at wavelength /3. In the SHG process, two input photons () are required to generate the
SHG signal (at /2). In two-photon fluorescence, an excitation source at wavelength with sufficient peak intensity is used, such that there is a high
probability of absorbing two photons simultaneously, thus producing fluorescence at a wavelength just longer than the /2. The CARS process
is a nonlinear four-wave mixing process that involves three input photons to generate the CARS signal at
CARS
= 2
pump
Stokes
.
ND11_Semrock Feat_Layout 1 10/27/11 10:21 AM Page 25
overlapped and directed to a microscope
head via a specially designed notch
dichroic beamsplitter positioned at 45.
Through judicious wavelength selec-
tion, direct coupling of the characteristic
vibrational modes that uniquely identify
structures of interest within the sample can
be achieved. In CARS imaging, the Stokes
beam (
Stokes
) is typically fixed at a wave-
length of 1064 nm, while the pump beam
(
pump
) is typically produced by an optical
parametric oscillator (OPO), which can be
tuned across the 700- to 900-nm-wave-
length range. When the pump beam is
tuned to a wavelength of approximately
816 nm, the frequency difference (
CARS
)
is ~2850 cm
1
, which corresponds to the
symmetric CH
2
stretching vibration in
lipids.
In this example, the same pump beam
generated by the OPO laser at approxi-
mately 816 nm also can be used to gener-
ate the two-photon fluorescence and SHG
signals within the sample. To avoid inter-
ference from the CARS signal, the Stokes
beam can be blocked. Alternatively, to
permit simultaneous multiphoton fluores-
cence and CARS imaging, the Stokes
beam is allowed to pass to the microscope.
Both the CARS and SHG signals are de-
tected in the forward-scattering geometry,
while the two-photon fluorescence emis-
sion is detected in the backward (epi)
geometry.
Just as important as the right laser
sources is the choice of appropriate optical
filters matched to sensitive detectors. For
high-contrast multimodal NLO imaging, it
is critical that the proper filters are used to
transmit and reflect the input laser beams
and to transmit the multiphoton and CARS
signals. Characteristics that require careful
consideration are: greater than 95 percent
average transmission across the passband;
steep edges; and high out-of-band block-
ing. Controlling and managing the level of
undesired out-of-band light, such as the
bleedthrough from the source lasers, is
critical. Any stray laser light that reaches
the detectors can significantly affect the
acquisition of high-fidelity i.e., high-
26 BioPhotonics November/December 2011
Multimodal Imaging
Figure 3: In this schematic of a multimodal nonlinear optical microscope, two ultrafast laser
sources operating in the near-infrared are used to generate two-photon fluorescence emission,
second-harmonic generation and coherent anti-Stokes Raman scattering signals within a sample.
Dichroic filters are used to transmit and reflect the laser light into the microscope and to direct the
desired signals to each detection channel. Each photomultiplier tube detector is matched with an
appropriate emission filter to transmit the desired signal and block all out-of-band light.
Figure 4: Examples of filter options for multimodal nonlinear imaging: dichroic/emission pair
for multiphoton fluorescence, SHG and THG microscopy (left), and CARS microscopy (right).
ND11_Semrock Feat_Layout 1 10/27/11 10:21 AM Page 26
signal-to-noise-ratio images. Therefore,
dichroic filters that transmit and reflect
only the desired light signals as well as
emission filters that provide high blocking
(optical density >6 to 8) over an extended
wavelength range are required. Examples
of filter options for multimodal nonlinear
imaging are shown in Figure 4.
Photomultiplier tubes (PMTs) are the
most common detectors used in multi-
modal NLO imaging. PMT detectors
based on gallium arsenic phosphide are a
suitable choice for detecting light across
the visible range (400 to 700 nm). Alterna-
tively, red-sensitive PMT detectors, based
on multialkali metals e.g., Sb, Na, K,
Cs that provide high sensitivity across
the visible and extend out into the near-
infrared (>900 nm) also are popular
choices. Continued improvements in
detector sensitivity, reduction in footprint
and the advent of a less complex, easy-
to-use modular design have all benefited
NLO imaging applications.
Optical microscopy continues to play
an increasingly important role in biomed-
ical research. To date, techniques such as
wide-field, confocal and multiphoton
microscopy have provided a wealth of
insight and information on the form and
function of a myriad of samples, such as
live cells and biological tissue. By har-
nessing nonlinear imaging modalities into
one unified platform, multimodal NLO
imaging provides an even more powerful
microscopy-based approach with which to
study the health and function of biological
specimens.
One benefit of this approach in medical
research has been the use of multimodal
NLO imaging to advance our understand-
ing of cardiovascular disease, a leading
cause of illness and death globally. To elu-
cidate the impact of diet, researchers at the
University of California, Irvine, used mul-
timodal NLO imaging to understand how
dietary fat content affected kidney health
in animal models. They varied the fat con-
tent in the diet fed to animal subjects over
a period of weeks. Post-study analysis
using CARS, two-photon and SHG imag-
ing of the kidney allowed them to quanti-
tate the levels of accumulated fat deposits
within the kidney and their impact on sur-
rounding structural components, such as
collagen fibers. Multimodal NLO images
from this study are shown in Figure 1.
The researchers found a correlation
among all three nonlinear co-registered
signals, as shown by the composite image
(d). CARS imaging clearly revealed the
accumulation of lipid deposits within the
kidney and was used as a quantitative
measure for the fat content. They used the
collected two-photon autofluorescence sig-
nal to locate and identify important struc-
tures such as individual cells within the
kidney tubules and the SHG imaging not
only to identify collagen content within
the mouse kidney, but also to understand
the impact of fat content on the level of
collagen present as well as on collagen
fibrillogenesis.
Multimodal NLO imaging will continue
to find widespread use and growing popu-
larity in the life and health sciences. Con-
tinuing developments in ultrafast laser
sources, specialized hard-coated optical
interference filters and high-sensitivity
detectors make it straightforward to com-
bine various nonlinear imaging modalities,
such as CARS, two-photon, SHG and
even THG into a single, unified micro-
scope platform.
Meet the author
Dr. Neil Anderson is a technology development
analyst with Semrock Inc., a unit of Idex Corp.,
in Rochester, N.Y.; e-mail: nanderson@idex
corp.com.
Acknowledgment
The author thanks professor Eric O.
Potma, University of California, Irvine,
for supplying the data used in Figure 1.
References
1. W.R. Zipfel et al (2003). Nonlinear magic:
multiphoton microscopy in the biosciences.
Nat Biotech, Vol. 21, Issue 11, pp. 1369-
1377.
2. C.L. Evans and X.S. Xie (July 2008). Coher-
ent anti-Stokes Raman scattering micros-
copy: chemical imaging for biology and
medicine. Annual Rev of Analyt Chem,
Vol. 1, No. 1, pp. 883-909.
3. W.R. Zipfel et al (2003). Live tissue intrinsic
emission microscopy using multiphoton
excited native fluorescence and second-
harmonic generation. PNAS, Vol. 100,
No. 12, pp. 7075-7080.
4. C.P. Pfeffer et al (October 2008). Multimodal
nonlinear optical imaging of collagen arrays.
J Struct Biol, Vol. 164, Issue 1, pp. 140-145.
5. M.J. Farrar et al (2011). In vivo imaging of
myelin in the vertebrate central nervous
system using third harmonic generation
microscopy. Biophys J, Vol. 100, Issue 8,
pp. 1362-1371.
6. C.W. Freudiger et al (2008). Label-free bio-
medical imaging with high sensitivity by
stimulated Raman scattering microscopy.
Science, Vol. 322, pp. 1857-1861.
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BioPhotonics November/December 2011
Multimodal Imaging
ND11_Semrock Feat_Layout 1 10/27/11 10:21 AM Page 27
BioPhotonics November/December 2011 28
Retina Div., at Johns Hopkins Hospital in
Baltimore. Typically, these procedures
are performed in the outpatient clinic with
the use of topical anesthetic eyedrops.
A contact lens is positioned onto the eye
to lubricate the cornea and hold open the
eyelid. The laser settings including
power, spot size, pulse duration and repeti-
tion rate are selected, and the aiming
beam is focused through the pupil onto
the desired areas for retinal treatment.
Recent studies have demonstrated that
the science behind photocoagulation is
more complicated than once thought and
that heating produces a constellation of
changes at the molecular level in individ-
ual cells; e.g., photocoagulation creates a
surge in free radicals.
Progress so far
Developments in laser technology have
made lasers of various wavelengths possi-
ble, and the wavelength selected depends
upon the type of procedure being per-
formed.
The wavelengths typically used for reti-
Laser photocoagulation can be used
to treat the wet form of AMD, in which
blood vessels start to leak into the retina,
creating fogging and, later, a blind spot in
the center viewpoint. Other ocular condi-
tions that can be treated include prolifera-
tive diabetic retinopathy, diabetic macular
edema, vascular occlusions, central serous
chorioretinopathy, retinal tears, tumors,
choroidal neovascularization, arterial
macroaneurysms and retinopathy of
prematurity.
The treatment strategy utilized for pho-
tocoagulation varies, depending upon the
particular disease process, said Dr. Adri-
enne W. Scott, assistant professor of oph-
thalmology at The Wilmer Eye Institute,
S
ocrates first described nonlaser
photocoagulation in 400 B.C. after
observing solar eclipse burns of the
retina. But it was not until an afternoon
in July 1945 when an unfortunate medical
student viewed a partial eclipse of the sun
in Northern Europe that the potential
benefits of light burns to the eye were
first realized.
The student in question worked under
German ophthalmologist Dr. Gerhard
Meyer-Schwickerath, who came to the
conclusion in 1947 that an evolving retinal
detachment stops at a scar. The idea to
produce artificial scars by intense light
illumination came to him in the same year
during a restless night where he wrote two
words, light and coagulation, on a
sheet of paper, so as not to forget the
thought by morning.
In 1957, the light coagulator was pre-
sented by Carl Zeiss as the first commer-
cially available photocoagulation device,
and more than 1000 were sold until the
late 1970s.
But it was the invention of the laser in
1960 that catapulted this technology into
ophthalmology. Since that time, photoco-
agulation lasers have been reduced contin-
uously in volume, weight and price.
Although photocoagulation is used in
almost every surgical specialty e.g.,
lasers to treat vascular lesions, benign and
malignant tumors, and bleeding ulcers
Dr. Matthias Schulze, director of market-
ing at Coherent Inc., believes that the use
of photocoagulation in ophthalmology is
the most important because of the growing
market: More and more older people are
suffering from vision deterioration such as
that resulting from age-related macular de-
generation (AMD), the leading cause of
blindness in the Western world.
Photocoagulation the deliberate destruction of tissue by absorption of
radiant energy and its conversion to heat is a treatment undertaken to
save another area of tissue deemed more valuable. It has become a
primary tool in the treatment of myriad ocular conditions.
BY MARIE FREEBODY
CONTRIBUTING EDITOR
Healing Through Laser Damage
Photocoagulation:
A fundus photograph showing treatment with single-spot conventional photocoagulation burns (bottom left)
and adjacent areas treated with patterned scanning laser photocoagulation (top right). Courtesy of Dr. Yannis
M. Paulus.
nd11_FeatPhotocoagulation_Layout 1 10/27/11 10:23 AM Page 28
29 BioPhotonics November/December 2011
said. Yellow light is an absorption maxi-
mum of oxyhemoglobin, allowing for
better selective treatment of vasculature
and more uniform absorption.
numerous reasons. It is less affected by
small-angle scattering in the transparent
ocular media and provides greater trans-
mittance through corneal opacities, he
nal photocoagulation range from ~400 to
800 nm. This spans the majority of the
visible electromagnetic spectrum (violet,
380 nm, to red, 750 nm) and part of the
infrared spectrum (750 nm to 1 mm).
The ideal wavelength is characterized
by good penetration through ocular media
and maximal absorption in the target tis-
sue. Shorter wavelengths are more easily
scattered; hence, red light (620 to 750 nm)
has better penetration than blue light (450
to 495 nm), Scott said. Scatter is a result
of radiation absorption by tissues other
than the target. It can occur anywhere
anterior to the retina, including the
anterior segment, lens and vitreous.
The degree of scattering increases with
the maturity of the cataract a clouding of
the lens of the eye and vitreous hemor-
rhage. In such cases, Scott suggests that a
longer wavelength, increased laser duration
or higher energy levels may be required.
Typical laser power levels range from
1.5 to 8 W. The power often is adjusted
during a procedure to ensure that the de-
sired burn is applied over the surface of
the eye. This approach is known as titra-
tion and is necessary because laser power
can vary dramatically among individuals.
Table 1 summarizes the systems, wave-
lengths and pulse durations of currently
available laser photocoagulators.
The green laser wavelength is the most
commonly used laser for photocoagulation
and is mainly employed in two systems:
argon gas (514.5 nm) and solid-state
frequency-doubled Nd-YAG (532 nm),
Scott said. Argon green laser confers the
advantage of a strong affinity for melanin
and hemoglobin with minimal absorption
of xanthophyll, the predominant pigment
in the macula.
However, Dr. Yannis M. Paulus at
Stanford Universitys Byers Eye Institute
at Stanford in California explains that the
yellow laser (577 nm) is preferable to
green in macular and vascular diseases for
Laser Type
CO
2
(carbon dioxide) 9.2 to 10.8 m CW or ms-pulsed
OPSL (optically pumped 480 to 580 nm CW or ms-pulsed
semiconductor laser)
Argon 488, 514 nm CW or ms-pulsed
HeNe 533 nm CW
Nd:YAG 1064 nm CW 100 ns
Nd:YLF 1053 nm CW 10 ps
Diode 635 to 1550 nm CW 2 ns
Dye 450 to 900 nm CW 100 fs
Ruby 694 nm 1 to 250 s
Krypton 531, 568, 647 nm CW or ms-pulsed
Ti:sapphire 700 to 1000 nm 60 fs to 10 ps
Alexandrite 720 to 800 nm 100 s to 50 ns
Er:YAG 2.94 m 100 ns to 250 s
Er:YSGG 2.78 m 100 ns to 250 s
Ho:YAG 2.12 m 100 ns to 250 s
Wavelength Pulse Duration
Coherents Genesis 577 laser is used in photocoag-
ulation applications. Courtesy of Coherent Inc.
Types of photocoagulation lasers (CW = continuous wave). Courtesy of Dr. Yannis M. Paulus, Byers Eye
Institute at Stanford, Stanford University.
Histology of light retinal photocoagulation lesions produced with 7-ms-pulse-duration burns reveals healing of
photocoagulation lens over four months, resulting in almost continuous normal retinal morphology. Reprinted
with permission from the Association for Research in Vision and Ophthalmology, from Y.M. Paulus et al (2008).
Healing of retinal photocoagulation lesions. Invest Ophthal Vis Sci, Vol. 49, Issue 12, pp. 5540-5545.
nd11_FeatPhotocoagulation_Layout 1 10/27/11 10:23 AM Page 29
Until recently, yellow lasers were lim-
ited to costly tunable dye and Krypton
lasers. However, this changed in 2008
with the advent of optically pumped semi-
conductor lasers based on near-infrared-
pumped quantum-well structures.
For Coherents Schulze, the most versa-
tile systems feature green, yellow and red
in a combined tool.
Better understanding, better treatment
Ophthalmologists and laser makers
alike are striving toward a greater under-
standing of the mechanism of action in
photocoagulation so that minimally trau-
matic retinal lasers can be designed for
safe and effective use in any area of the
retina, including the macula.
We have come to understand that the
therapeutic effect from photocoagulation
is not only from tissue destruction but
rather from a complex biological response
to photocoagulation, Paulus said. If we
can induce this therapeutic effect without
causing permanent retinal scarring, we
could treat the entire retina in a short
period of time without worrying about
protecting vital structures, and even
retreat areas of retina.
Rather than watching for a visible
change in the retina, one aim is for real-
time monitoring of retinal temperature
during laser coagulation.
For many coagulator manufacturers,
one of the open issues in photocoagulation
is choosing the right dosage of laser en-
ergy during a treatment session.
The retina of an elderly patient suffer-
ing from severe diabetic retinopathy is
strongly varying in pigmentation, absorp-
tion and scattering losses from point to
point; therefore, for a proper therapy re-
sult, the laser power should be adjusted
individually for every laser spot.
In daily clinical practice, this is impos-
sible when setting up to 2500 lesions
within a single photocoagulation session.
The titration process typically involves
starting with a single spot (or a small pat-
tern) in the midperiphery and increasing
the laser power until a proper whitening
of the retinal tissue occurs.
After this initial setting, the laser energy
is changed if the whitening disappears or
is becoming far too strong. This typically
occurs five to 10 times a session. The re-
sult is areas of over- and undertreatment,
which becomes worse in multispot therapy.
Some medical photonics companies
are working on an individual, feedback-
controlled laser treatment to optimize
outcomes and minimize side effects.
Low-dose laser technologies might have
a certain effect on one point of the retina
but a zero effect if the tissue slightly
alternates.
Although not yet clear whether supra -
threshold, just-above-threshold or sub-
threshold laser therapy would provide the
maximum benefit for the patient, there is
confidence that physicians will figure this
out by using automated dosimetry-con-
trolled photocoagulation therapy lasers.
Once this clinical work is completed, we
should know which treatment option will
be best and whether image-guided laser
therapy is clinically needed or only a nice-
to-have but expensive feature.
marie.freebody@photonics.com
30 BioPhotonics November/December 2011
Photocoagulation
The Navilas laser platform showing preplanning
of laser spots. Courtesy of OD-OS Retina Naviga-
tion Co.
This fundus photograph shows laser burns after application with the OptiMedica Corp.-designed pattern scan
laser photocoagulator PASCAL (now produced by Topcon Corp. of Tokyo). The circular and square patterns
were made in <1 s with a scanning laser and shorter pulse duration. Courtesy of Dr. Yannis M. Paulus.
A wide-field fluorescein angiogram of a patient with
diabetic retinopathy demonstrates profound periph-
eral capillary dropout. The white arrow points out
areas of the peripheral retina that appear dark on
fluorescein angiography because of the absence of
the normal retinal capillaries in the setting of diabetic
retinal ischemia. Courtesy of Dr. Adrienne W. Scott.
This is the same patient, one week after scatter laser
photocoagulation to the peripheral retina using a
targeted argon green laser (PASCAL) on the areas
of poor retinal circulation. The laser lesions, indi-
cated by the white arrow, are seen as round dark
spots within the peripheral retina. Courtesy of
Dr. Adrienne W. Scott.
nd11_FeatPhotocoagulation_Layout 1 10/27/11 10:23 AM Page 30
B
iomedical researchers most often
carry out rapid assays of large cell
populations on a single-cell basis
with a flow cytometer. The instrument
originated from research using cell count-
ing with laminar flow in the 1950s and
from fluorescence measurement in the
1960s. The device can achieve rapid assay
with a laminar flow to hydrodynamically
focus the core fluid, which contains the
cells.
1,2
The narrowed core fluid then
transports the cells in single file through
one or more interrogating beams of inci-
dent light.
The optical excitation of a flowing
cell leads to two types of light signal
emissions. The first type is called a scat-
tered light signal, which has the same
wavelength as the incident light and arises
from the heterogeneity of the cells refrac-
tive index relative to the surrounding
medium. The second type of emission is
made up of fluorescent signals from wave-
lengths that usually are larger than the
Diffraction-Imaging
Flow Cytometry
Enables Rapid Cell Assay
BioPhotonics November/December 2011 31
A new method allows fast,
label-free cell classification by
combining high-contrast image
acquisition with automated
analysis. This method could
open doors for expanded
clinical applications such as
classification of blood and
tumor cells based on their
3-D morphological features.
BY XIN-HUA HU, EAST CAROLINA UNIVERSITY AND WAVMED TECHNOLOGIES CORP.;
YUANMING FENG, TIANJIN UNIVERSITY; AND JUN QING LU, EAST CAROLINA UNIVERSITY
Figure 1. Two views of reconstructed structures of (a) a Jurkat cell derived from a T lymphocyte and (b) an
NALM-6 cell derived from a B lymphocyte. The dark-blue surfaces are cell membranes, the light-blue surfaces
are aggregated mitochondria, and the green are nuclear membranes. (c) Two simulated diffraction images of
side scatters are shown from the same cell structure: The left corresponds to a cell membrane surface with the
same index of refraction as that of cytoplasm at n
m
n
c
1.35; the right corresponds to the same structure,
but its cell membrane surface index is set at n
m
1.50. Courtesy of the authors.
nd11_FeatureFlow_Layout 1 10/27/11 10:24 AM Page 31
wavelength of the incident light; they are
caused by fluorescent molecules inside
the cell. Because most biological cells are
not self-fluorescing, cells often must be
stained with fluorescent reagents before
the flow cytometer can measure them.
Although both types of light signals
are acquired from the excited cells for
analysis and classification, existing flow
cytometers depend mainly on fluorescent
signals because the conventional designs
for these instruments have limited ability
to extract information from scattered light
signals.
Existing flow cytometers can be di-
vided into two categories according to
their approach to signal acquisition. Most
are designed with a single light detector
such as a photomultiplier or photodiode
to measure signals from both scattered
light and fluorescence from stained cells.
3
Since both signals are relatively strong in
relation to background noise, this design
permits signal measurement and acquisi-
tion during a time window as short as
about 10 s; this provides a foundation
for collecting light signals from flowing
cells at rates of up to 10
4
cells per sec-
ond, or millions of cells in less than half
an hour. At that speed for single-cell
analysis, no other instrument even comes
close, which is the main reason for its
increasing popularity among biomedical
researchers.
In 2005, another flow cytometer design
began to emerge. Its approach to image
acquisition is based on early research
dating from the 1980s.
4
This system essen-
tially combines a conventional microscope
with a flow cytometer to acquire nondif-
fraction images of cells very quickly. Most
flow cytometers, though, rely mainly on
fluorescent light, which can provide multi-
ple images per flowing cell, offering addi-
tional information on morphology. This
benefit comes with a cost, however:
lower throughput of 10
3
or fewer cells
per second.
Conventional cytometers: Drawbacks
Despite their wide applications, conven-
tional flow cytometers do have their draw-
backs. Fluorescent signals yield important
molecular signatures for the interro gated
cells, but a single detector can tell only
whether and how many labeling fluo-
rescent molecules exist in a cell. Morphol-
ogy information is acquired, but the
nondiffraction images yield only 2-D
projections of 3-D cell structure. More
importantly, these nondiffraction images
contain complex patterns that are ex-
tremely difficult to interpret using auto-
mated image analysis with current com-
puter algorithms. Considering that the
data stream from an imaging flow cytome-
ter can yield huge amounts of data in a
short amount of time, the lack of auto-
mated image analysis in real time can
present a significant roadblock to taking
full advantage of the images for analysis
and classification of cells.
Second, measuring fluorescent signals
often requires staining cells with multiple
reagents, which is a time-consuming
process and adds extra costs. In fact, it is
widely known that reagent purchase is a
major factor associated with the high cost
of using flow cytometers. Finally, it is al-
ways possible for the fluorescent reagents
to interfere with various biochemical
processes within the cells under study,
and additional tests may be needed to
verify and/or minimize this possibility.
Scattered light signals
It has long been known that diffraction
imaging methods can be used to acquire
3-D structures of an object under coherent
illumination from scattered signals. Soon
after the discovery of x-rays more than a
century ago, Max von Laue and others
found that the patterns of x-ray photons
scattered from a crystal sample as
recorded by a film can be associated with
3-D lattice structure and constants of the
crystal. The observed patterns were used
to illustrate the wave nature of x-ray radia-
tion as a result of interference or diffrac-
tion among the coherently scattered pho-
tons. The results of diffraction research led
directly to the birth of x-ray crystallogra-
phy, which is still widely used by scien-
tists to reconstruct biomolecules in 3-D.
Extending this 3-D image reconstruc-
tion method to the optical domain is much
more difficult, it turns out, because of the
need for highly coherent light sources.
Dennis Gabor was probably the first to
32 BioPhotonics November/December 2011
Flow Cytometry
Figure 2. The flow chamber is based on a jet-in-fluid design concept that uses the objective to collect side
scatters for diffraction imaging.
nd11_FeatureFlow_Layout 1 10/27/11 10:24 AM Page 32
demonstrate experimentally the feasibility
of 3-D reconstruction with optical light.
5
However, his significant discovery had to
wait for the birth of lasers more than a
decade later to be fully appreciated as a
high-quality 3-D imaging modality.
As tools for light scattering models
have become available, researchers have
realized that 3-D reconstruction of an
object is possible without a reference
beam if a sufficient number of diffraction
images are acquired. Nevertheless, 3-D
reconstruction of cell structures for rapid
assay and classification is difficult, if not
impossible, in a flow cytometer setting
because multiple diffraction images are
needed, and time-consuming inverse
calculations must be performed.
Over the past 10 years, we have con-
ducted research on modeling and have
performed experimental studies on light
scattering by biological cells.
6-8
The results
have led to the recent development of a
new diffraction imaging approach using
flow cytometers.
9-11
By using confocal
fluorescence microscopy and staining the
nucleus and mitochondria with various
reagents, we made realistic 3-D recon-
structions of cell structures. The technique
allowed us to import precisely sized struc-
tures into a computer model for accurate
simulations of light scattering by single
cells. Figures 1a and 1b present 3-D cell
structures viewed from two perspectives.
By assigning different refractive index
values to the intracellular components and
solving Maxwells equation, we can obtain
the angular distribution of scattered light
fields from a cell. With this numerical
modeling tool, diffraction images can be
simulated by projecting the scattered light
intensity on a plane representing an imag-
ing sensor.
Using different 3-D distributions of
intracellular refractive index, diffraction
images can be simulated that yield insight
into the correlation between diffraction
image patterns and 3-D morphological and
index distribution features of illuminated
cells. Two examples of simulated images,
shown in Figure 1c, demonstrate the effect
of intracellular distribution of refractive
index. Taken together, these results moti-
vated us to incorporate the diffraction im-
aging into flow cytometry through a new
approach an alternative to reconstruction
in which the image data are analyzed in
real time as the fingerprints of 3-D opti-
cal structures for rapid assay of cells. We
have also performed goniometric measure-
ment of scattered light signals from cell
suspension samples and have found that
polarization-based measurement can pro-
vide additional handles for cell classifica-
tions, as expected from modeling results.
Designing a new cytometer
Armed with these new insights, we set
out to investigate various designs for the
flow nozzle and flow chamber for the
diffraction imaging flow cytometer we
were developing. These elements play a
key role in forming a hydrodynamically
focused laminar flow positioning cells
accurately at the optical focus of the inter-
rogating laser beam without any index-
mismatched interfaces close to the excited
cell and at the desired speed.
Several groups have published various
designs for flow chambers that acquire dif-
fraction images from cells; these include a
glass flow cell with a square, narrow chan-
nel and a waveguide-based beam-in-ow
design.
12,13
None of these fit our require-
BioPhotonics November/December 2011 33
Flow Cytometry
Figure 3. Normalized diffraction images acquired from (a, b) Jurkat cells derived from T lymphocytes and (c, d) Ramos cells derived from B lymphocytes using two 12-bit
CCD cameras with an excitation wavelength of 532 nm for each flowing cell: (a) and (c) are images of side scatters with vertical polarization; (b) and (d) are images of
side scatters with horizontal polarization. The polarization direction of the incident light beam is vertical (top row), 45 from vertical (middle row), and horizontal (bottom
row). The three numbers on the right side of each image are the minimum, average and maximum pixel readings of the 12-bit images before normalization.
nd11_FeatureFlow_Layout 1 10/27/11 10:24 AM Page 33
ments for acquiring high-contrast diffrac-
tion images with ease of alignment.
After numerous tests and design im-
provements, we finally arrived at a jet-in-
fluid flow chamber design to meet the
above requirements. It incorporates a noz-
zle built in-house to guide the sheath and
core fluids into a water-filled cuvette with
its sides several millimeters away from the
core fluid. The two fluids from the nozzle
form a laminar flow in which the core fluid
narrows to an exit tube in the cuvette. A
3- to 5-mm-long gap space exists between
the extending tip of the core channel in the
nozzle and the exit tube to allow efficient
collection of scattered light from the bio-
logical cell by the CCD camera, without
any noise-producing index-mismatched
interfaces within the field of view. With
the incident laser beam focused at the core
fluid just above the exit tube, the position-
ing of the flowing particles at the laser
beams waist can be accurately achieved
in the gap space with no heterogeneity
of refractive index near the excited cell.
Figure 2 exhibits a close-up view of the
nozzle and chamber.
After the initial development stage, we
constructed two experimental prototypes
of a diffraction imaging flow cytometer
for conducting cell measurements at our
labs at East Carolina University and Tian-
jin University. The current design allows
for the acquisition of two polarization-
resolved images per excited cell using a
polarizing beamsplitter behind the infinity-
corrected microscope objective, which
collects side light scatters. Exploiting
polarization information from diffraction
image data can provide additional parame-
ters for cell analysis and classification,
and data from various polarization states
of the incident laser beam can be incor -
porated. By adopting the gray-level co-
occurrence matrix algorithm widely used
for analyzing human fingerprints, we can
extract multiple parameters at a rate of 70
images per second using a 2-GHz laptop
computer for cell classification.
With further optimization of the auto-
mated image analysis code and parallel
execution on multiple GPUs, we expect
that, in the near future, real-time diffrac-
tion image processing for cell classification
can be scaled up to a rate of 10
3
images per
second. Figure 3 shows some examples of
recent diffraction image data collected
from cultured cells derived from B and T
lymphocytes from cancer patients. Quick
visual examination indicates that differ-
ences in pattern and intensity may be used
to perform label-free classifications of
these two lymphocyte-derived cell types.
A detailed study to test this hypothesis
using the gray-level-co-occurrence matrix
algorithm is in progress.
Meet the authors
Dr. Xin-Hua Hu is a physics professor at East
Carolina University in Greenville, N.C., and
chief scientist at WavMed Technologies Corp.
in Tianjin, China; e-mail: hux@ecu.edu.
Dr. Yuanming Feng is a professor and chairman
of the biomedical engineering department at
Tianjin University in China; e-mail: ymfeng
@tju.edu.cn. Dr. Jun Qing Lu is an associate
professor of physics at East Carolina Univer-
sity; e-mail: luj@ecu.edu.
References
1. P.J. Crosland-Taylor (January 1953). A de-
vice for counting small particles suspended
in a fluid through a tube. Nature, pp. 37-38.
2. W. Dittrich, W. Gohde (March 1969). Im-
pulsfluorometrie bei Einzelezellen in Suspen-
sionen. Z Naturforsch B, pp. 360-361.
3. M.R. Melamed et al (1990). Flow Cytometry
and Sorting. 2nd ed. Wiley-Liss.
4. S.H. Ong et al (October 1987). Development
of an imaging flow cytometer. Anal Quant
Cytol Histol, pp. 375-382.
5. D. Gabor (1948). A new microscopic princi-
ple. Nature, Vol. 161, pp. 777-778.
6. J.Q. Lu et al (April 4, 2005). Simulations of
light scattering from a biconcave red blood
cell using the FDTD method. J Biomed Opt,
024022.
7. R.S. Brock et al (November 2006). Effect
of detailed cell structure on light scattering
distribution: FDTD study of a B-cell with
3D structure constructed from confocal
images. J Quant Spectrosc Radiat Transfer,
pp. 25-36.
8. H. Ding et al (2007). Angle-resolved Mueller
matrix study of light scattering by B-cells at
three wavelengths of 442, 633, and 850 nm.
J Biomed Opt, Vol. 12, 034032.
9. K.M. Jacobs et al (2009). Development of a
diffraction imaging flow cytometer. Opt Lett,
Vol. 34, pp. 2985-2987.
10. K.M. Jacobs et al (2009). Diffraction imag-
ing of spheres and melanoma cells with a
microscope objective. J Biophotonics,
Vol. 2, pp. 521-527.
11. K. Dong et al (2011). Study of cell clas -
s ification with a diffraction imaging flow
cytometer method. SPIE Proc, 7902.
12. J. Neukammer et al (2003). Angular distri-
bution of light scattered by single biological
cells and oriented particle agglomerates.
Appl Opt, Vol. 42, pp. 6388-6397.
13. K. Singh et al (February 2004). Analysis of
cellular structure by light scattering measure-
ments in a new cytometer design based on
a liquid-core waveguide. IEE Proc Nano -
biotechnol, Vol. 151, pp. 10-16.
34 BioPhotonics November/December 2011
Flow Cytometry
nd11_FeatureFlow_Layout 1 10/27/11 10:24 AM Page 34
F
orensic crime shows such as CSI have
taken over TV networks worldwide,
providing viewers with a stylized
glimpse into forensic science. A vital part
of an investigators armory is the forensic
microscope, crucial for inspecting trace
evidence and for making bullet and tool
mark identifications. For a century now in
forensic biology, light microscopy has
been used to identify spermatozoa in
sexual assault cases.
Sadly, real-life crime laboratories often
have hundreds of thousands of cases
in vaults that have not yet been opened
some laboratories can even be years be-
hind, said Richard E. Dick Bisbing, a
forensic scientist for more than 40 years
and formerly with the Michigan State Po-
lice. He is now executive vice president of
McCrone Associates Inc. and an instructor
at Hooke College of Applied Sciences
LLC, both in Westmont, Ill.
There are horror stories about crimi-
nals roaming free because there are inade-
quate resources and too many samples
unworked, he said.
Digital imaging
Consequently, forensic microscopy
makers are looking to advance the devel-
opment of more highly automated systems
so that laboratory technicians can process
samples more quickly, easily, accurately
and less expensively.
Recent advances include combining
optical work with spectroscopy and
spectrophotometry for identifying fibers,
paints and polymers, but the biggest
change has occurred in the past few years:
digital imaging.
Digital imaging via instruments
such as the new Olympus polarized
light microscopes BXiS and BX53
means that microscopic images can be
captured with the touch of a button,
then automatically labeled and archived
together with related sample and analytical
information.
Back when we had to capture images
on film, documentation was often lacking.
Today, most laboratories take photos of
everything because they have high-quality
imaging systems built onto their micro-
scopes, Bisbing said. Thats been a big
change in forensic science in just the past
four or five years.
Thanks to the microscopes coded nose-
piece, all the calculations and magnifica-
tions are input automatically.
What this means in the laboratory
CSI Experts Find Clues
Faster with Microscopy
BioPhotonics November/December 2011 35
Tools such as the Olympus BXiS microscope,
when used with Stream software, provide
a comprehensive instrument for analysis of
forensic samples. A cross section of a composite
material is examined and measured using the
Olympus BX51M microscope and Stream
software. Courtesy of Olympus America Inc.
As criminal cases pile up, automation and digital imaging
techniques will help crime scene investigators
close them more quickly.
BY MARIE FREEBODY, CONTRIBUTING EDITOR
ND11_Forensic Feat_Layout 1 10/27/11 10:25 AM Page 35
where imaging is done is a much lower
cost per image, along with the ability to
store multiple images in multiple places
so data is never lost, said Matt Smith,
director of sales and marketing, Scientific
Equipment Group Industrial, of
Olympus America Inc. in Center Valley,
Pa. Hardware is only half a product
now users are really buying an inte-
grated system.
Combining optical techniques with in-
frared spectroscopy allows scientists to
identify paints, adhesive tapes, minerals
and related samples. In addition, Raman
spectroscopy techniques are growing in
popularity.
In some cases, forensic scientists use a
light microscope to make initial compar-
isons and select an appropriate portion of
the sample for analysis, and then use an-
other technique for some of the more
detailed work.
The integration of spectroscopy with
microscopes is expected to become more
refined, as is the streamlined integration
of entire systems, including software,
hardware and storage.
The more efficient and less costly
computer power becomes, the faster
this change will occur, Smith said. In
addition, creating databases that can be
queried easily is an area of importance.
Because photography increasingly is a
part of the work flow, digital camera
technology will continue to develop, with
cameras like the Olympus DP26, DP72
and other cameras that are more accurate,
provide better color rendition and are
push-button easy.
Chromosome sequencing advances
On the biological side, there have been
advances in chromosome sequencing,
and there is progress in performing intra-
cellular work with light microscopy.
Fluorescence and other light microscopy
techniques can now be applied to smaller
samples, down to individual cells.
From the toolmakers and manufactur-
ers perspectives, one of the greatest
changes is that the spectrographic compo-
nent, the optical components and all the
resulting data now can live in the same
36 BioPhotonics November/December 2011
Forensic Microscopy
A microscope magnifies cat hairs. Courtesy of McCrone Microscopes & Accessories.
Asbestos fibers are typical specimens for forensic microscopes. Courtesy of Olympus America Inc.
Unitrons comparison forensic microscope was
designed with the help of police organizations,
forensic scientists and educators in the field of
forensic science to inspect ballistics and firearms
and to make tool mark examinations.
Courtesy of Unitron Ltd.
ND11_Forensic Feat_Layout 1 10/27/11 10:25 AM Page 36
system using the same database, along
with images.
This is powerful because all the
techniques can be integrated on a
single platform such as the BXiS micro-
scope, used with Stream software, to
speed up the work flow for forensic
scientists, Smith said. Olympus also
partners on an OEM basis with some
excellent FTIR [Fourier transform in-
frared] and Raman systems, and all the
data from all of these techniques lives
in a single database.
Polarized light microscopes and other
modular instruments on the market accept
polarized light accessories but also can
be used for phase contrast, fluorescence
and other techniques used by biomedical
researchers and forensic biologists, ac-
cording to Jeffrey McGinn, president
and director of instrument sales at
McCrone Microscopes & Accessories
Inc. in Westmont, a sister company of
McCrone Associates.
Comparison microscopes and stereo-
microscopes also are used in forensic
applications, McGinn said. Additionally,
stereomicroscopes are always sold with
the polarized light systems. The stereos
are used for sample examination with
a larger field of view and the true 3-D
perspective offered by stereoscopic
viewing.
Unitron Ltd. of Commack, N.Y., re-
cently launched a comparison forensic
microscope (CFM) and is working on
approvals to place it into governmental
facilities. The CFM was designed with
the help of police organizations, forensic
scientists and educators in the field of
forensic science to inspect ballistics and
firearms and to make tool mark examina-
tions.
Evidence can be observed simultane-
ously via the comparison bridge that sup-
ports two sets of matched objective steps
on a five-step magnification changer.
The microscope series, equipped with
22-mm field-of-view eyepieces, produces
BioPhotonics November/December 2011 37
Forensic Microscopy
erect, unreversed images that move in the
same direction as the specimen for ease
of use. The images can be viewed at
100 percent right or left side, split screen
or superimposed.
I took our CFM to a forensic confer-
ence a few months ago and received noth-
ing but kudos from the state police, sher-
iffs department and local Bureau of
Investigation, said Heston Singh, a busi-
ness developer at Unitron. Our products
are considered mechanically and optically
competitive and are considered far
superior to most of the products coming
out of the Pacific Rim.
Beyond CSI
Its not just crime scene units that make
use of forensics: The FBI and other fed-
eral entities, private firms, private labora-
tories and even industrial laboratories use
forensic instruments. Some industrial
forensic work lies in research and devel-
opment, and some is used to solve prob-
lems relating to litigation and safety be-
cause some events can be understood only
by studying a material closely and identi-
fying its origin or composition.
Hooke College and McCrone Micro-
scopes & Accessories are carrying out
extensive US National Guard training,
working with first responders to teach
them essential techniques to identify
samples and assure safety when working
with unknown and potentially hazardous
materials.
When there is an incident, they show
up on the scene and aid in homeland
defense, McGinn said. We continue
to train these teams, who come to our fa-
cility for basic and advanced microscopy
courses.
Other future developments could come
from projects such as the cooperative
agreement between the National Institute
of Justice and Hooke College, in which
300 trace evidence examiners have been
trained so far in the use of light and elec-
tron microscopes, along with Raman and
infrared spectroscopy.
This is a development that can truly
help advance the practice of forensic
science, Bisbing said.
marie.freebody@photonics.com
There are horror stories about
criminals roaming free because
there are inadequate resources
and too many samples
unworked.
Dick Bisbing, forensic scientist
ND11_Forensic Feat_Layout 1 10/27/11 10:25 AM Page 37
R
esearchers working with lab-on-a-
chip and cell experiments to date
have relied on general-use micro-
scopes to view the flow of materials
through microchannels and to image mi-
croparticles. These instruments typically
are large and expensive and lack the fea-
tures for viewing live cells and other parti-
cles. Their look-down design inhibits
access for high-voltage electrodes, syringe
pumps and other hardware necessary for
micro- and nanofluidic research and
development experimentation.
A modular, inverted fluorescence syn-
chronized video microscope (Figure 1)
has been developed for imaging micro-
and nanofluidic bioanalyzer prototypes.
The system combines bottom-up viewing
and illumination with a motionless sample
stage, enabling visualization of microsys-
tems without perturbing the fluid flow.
The motionless stage also acts as an opti-
cally accessible lab bench, with unhin-
dered access for external electrical and
fluid connections.
Microanalytical methods hold great
promise for rapid microbial detection,
separation and concentration. Researchers
working with microanalytical methods
require an imaging platform that allows
them to verify in real time the pres-
ence of particles and cells passing through
microchannels or capillaries. Traditional
microscopes, in which the optics are
housed in a stationary head above a mov-
ing stage, have several drawbacks for
these experiments:
The moving stage can easily perturb
the microfluidic system.
The microscopes objective impedes
access to the microfluidic chips,
fluid circuits or cell plates and
other hardware.
Standard illumination can quench
the fluorescent dyes used to view
the particles or microorganisms.
The inverted fluorescence synchronized
video microscope was designed to provide
high-quality images and video of micro-
38 BioPhotonics November/December 2011
High-quality video and
images from an inverted
fluorescence synchronized
video microscope show
promise for imaging
micro- and nanofluidic
bioanalyzer prototypes.
Figure 1. The inverted fluorescence synchronized video microscope.
Inset image shows epifluorescence module imaging a micro fluidic
channel from below. Images courtesy of LabSmith Inc.
Inverted Fluorescence Microscopy Aids
Microseparation Studies
BY DR. YOLANDA FINTSCHENKO, LABSMITH INC.,
AND DR. BLANCA H. LAPIZCO-ENCINAS,
TENNESSEE TECHNOLOGICAL UNIVERSITY
nd11_FeatLabsmith_Layout 1 10/27/11 10:26 AM Page 38
and nanosystems. The instruments small
size allows it to be used on a desk or
benchtop. The stage is immobile, leaving
the experimental setup unperturbed by the
imaging process. Images are displayed on
a computer, so there is no need for over-
head viewing optics.
Figure 2 shows an exploded view of the
microscopes major components. The op-
tics are contained within the camera mod-
ule. An LED ring illuminator module can
provide external illumination at a variety
of wavelengths for fluorescence and dark-
field microscopy. Stroboscopic illumina-
tion reduces quenching of fluorescent dyes.
The camera and illumination modules both
attach to an X-Y stage that moves beneath
a stationary stage top. This design lets re-
searchers construct microsystems directly
on the microscope and allows unimpeded
connection to other equipment.
An epifluorescence camera module can
provide greater wavelength selectivity for
improved signal-to-noise. This module
contains illumination and filters as well
as the camera. Light returned from the
sample follows a common optical path.
The microscopes operating software
also can record pictures or movies and
can insert velocity probes for particle
image velocimetry experiments.
Bioanalytical efficiency
An example of the efficacy of the mi-
croscope is in the research of Dr. Blanca
H. Lapizco-Encinas, associate professor
of chemical engineering and director of
the Microscale Bioseparations Laboratory
at Tennessee Technological University in
Cookeville. Her team is studying an im-
proved method for single-step separation
and concentration of macromolecules,
microorganisms and nonorganic particles.
The method, insulator-based dielec-
trophoresis (iDEP),
1,2
is a variant of dielec-
trophoresis, a process in which nonuniform
electric fields concentrate and separate par-
ticles.
3
In the iDEP technique, two remote
electrodes apply a direct current across a
microchannel filled with a conductive
electrolyte and an array of insulating
structures. The structures do not conduct
current and thus create the nonuniform
electric fields necessary for DEP.
By varying experimental parameters
and the shape, size, spacing and orienta-
tion of the insulator posts, particles and
cells of specific sizes can be trapped, sep-
arated and concentrated in seconds or min-
utes, rather than the hours or days required
by traditional concentration techniques.
Because iDEP microdevices are inexpen-
sive and relatively simple to fabricate, the
method holds significant promise for
miniaturized high-throughput sampling
systems. The electric field gradient is
easily controlled across the entire volume,
enabling scalability.
For the iDEP method to be widely im-
plemented, it is necessary to understand
BioPhotonics November/December 2011 39
Figure 2. Exploded view of the microscopes major components.
Figure 3. Schematic representation of the microfluidic channel setup for studying the parameters of the iDEP
method, (a) side view and (b) top view.
Figure 4. Experimental setup shows
vacuum manifold and a circular
glass microfluidic chip on the stage
of the microscope.
nd11_FeatLabsmith_Layout 1 10/27/11 10:27 AM Page 39
the conditions that result in the best trap-
ping of various-size particles and organ-
isms. To that end, Lapizco-Encinas and
her team developed extensive, predictive
models encompassing a range of experi-
mental conditions. To corroborate the
models, a set of iDEP experiments was
conducted, in which a microchannel was
fabricated containing an array of cylindri-
cal, insulating posts, 200 m in diameter
and spaced on 250-m centers (Figure 3).
A DC field is applied both to trap the par-
ticles and to drive the fluid flow through
the channel by means of electro-osmosis.
4
Real-time examination of events in the
microchannel was required over the course
of the experiments to verify the predictive
models. An inverted fluorescence video
microscope was selected as the imaging
platform for the iDEP experiments.
The instrument was perfectly suited to
our work, said Hctor Moncada Hernn-
dez, a senior PhD student in Lapizco-
Encinas laboratory. We were able to
construct our experimental setups directly
on the microscope, as if it were a table.
Since we were working with voltages of
1000 V or more, it was also important that
we did not have a microscope objective or
other metal parts in the field that could
ground our electrodes.
Figure 4 shows the setup for the iDEP
experiments, in which a vacuum manifold
and a circular glass microfluidic chip are
placed atop the stationary stage of the
microscope.
In a first set of studies, a sample of
fluorescent 1-m microspheres was intro-
duced at the inlet of the microchannel and
a voltage applied to drive the fluid flow
through the channel (Figure 5). Images
and video of the fluid flow allowed the
researchers to fine-tune the voltage, as
well as the pH and conductivity of the
suspending buffer, to maximize particle
trapping (Figure 5a).
In a second set of experiments, a sam-
ple containing E. coli was introduced into
the microchannel. The cells were labeled
with SYTO 9 fluorescent dye for visibility.
Whereas the illuminator of a standard
microscope can quench the dye, leaving
the cells indiscernible, the stroboscopic
illuminator of the inverted fluorescence
video microscope minimizes quenching,
enabling high particle visibility over
longer experiments.
In addition, the microscopes epifluores-
cence camera module was used to improve
visibility. The epifluorescence capability
40 BioPhotonics November/December 2011
Fluorescence Microscopy
Figure 5. A DC potential of 800 V is applied
across a microchannel with suspended 1-mm
microspheres. The particles appear in bright
white between the insulator posts. Researchers
used images such as these to fine-tune parame-
ters to maximize particle trapping. (a) Particles
are being successfully immobilized by employ-
ing a suspending medium with conductivity of
100 s/cm and pH of 6. (b) Immobilization
decreases when pH is increased to 9. (c) Immo-
bilization decreases when conductivity is de-
creased to 25 s/cm.
4
Figure 6. E. coli cells trapped at a potential of 1000 V, viewed with a 4 objective. (a) Image taken using
standard LED illumination. (b) Same image, taken with the epifluorescence module, which improves imaging
of low concentrations.
Figure 7. Dielectropherogram shows peaks of concentrated E. coli and S. cerevisiae cells as a function of
time and applied DC voltage. Simultaneous concentration and separation in <2 min was visualized with the
microscope by fluorescence measurements.
5
nd11_FeatLabsmith_Layout 1 10/27/11 10:27 AM Page 40
helped us to see low concentrations of
particles that we may have missed using
standard illumination, Lapizco-Encinas
said. Figure 6 shows E. coli cells trapped
at a potential of 1000 V, as imaged with
standard illumination (left) and with
improved visibility resulting from the
use of epifluorescence (right).
A third set of studies shows the great
potential of the iDEP method for rapid
microorganism concentration and separa-
tion.
5
Water from a pond was filtered to
remove larger particles, then spiked with
labeled E. coli and Saccharomyces cere-
visiae yeast cells. An electric field was
applied to immobilize and concentrate
both types of cells. The field was then
lowered to release the bacteria, and 30
seconds later, the field was lowered
again to release the yeast cells.
Fluorescence measurements made with
the microscope allowed researchers to plot
the passage of high concentrations of each
type of cell as clearly separated events.
Figure 7 shows a dielectropherogram of
the events, in which an electric field gradi-
ent eluted the concentrated cells from the
microchannel.
A further advantage of the inverted
fluorescence microscope is its integrated
software for capturing images and video
of fluid flow and analyzing the results.
The software includes facilities for auto-
matically triggering video capture based
on the presence of microparticles or other
events. This capability ensures that critical
events are not missed, even over the
course of hours- or days-long experiment
runs. Particle imaging velocimetry tools
are integrated with the microscope soft-
ware, which allows researchers to easily
map the velocity of the flow through
microfluidic channels.
4
The inverted fluorescence synchronized
video microscope addresses the require-
ments of researchers working with micro-
or nanofluidic experiments. It brings to-
gether the features required for microflu-
idics work, including a stationary stage,
high-quality imaging, and software to cap-
ture publication-quality images and video.
Meet the authors
Dr. Yolanda Fintschenko is the director of new
technologies, marketing and sales at LabSmith
Inc. in Livermore Calif.; e-mail: yfintschenko
@labsmith.com. Dr. Blanca H. Lapizco-Encinas
is associate professor of chemical engineering
and director of the Microscale Bioseparations
Laboratory at Tennessee Technological
University.
References
1. E.B. Cummings et al (2003). Characteriza-
tion of electrokinetic mobility of microparti-
cles. Anal Chem, Vol. 75, pp. 4724-4731.
2. B.H. Lapizco-Encinas et al (2004). Dielec-
trophoretic concentration and separation of
live and dead bacteria in an array of insula-
tors. Anal Chem, Vol. 76, pp. 1571-1579.
3. H.A. Pohl (1951). The motion and precipita-
tion of suspensoids in divergent electric
fields. J Appl Phys, Vol. 22, pp. 869-871.
4. J.I. Martnez-Lpez et al (2009). Characteri-
zation of electrokinetic mobility of micropar-
ticles in order to improve dielectrophoretic
concentration. Anal Bioanal Chem, Vol. 394,
pp. 293-302.
5. H. Moncada Hernndez et al (2010). Simul-
taneous concentration and separation of
microorganisms: insulator-based dielectro -
phoretic approach. Anal Bioanal Chem,
Vol. 396, Issue 5, pp. 1805-1816.
BioPhotonics November/December 2011 41
Fluorescence Microscopy
nd11_FeatLabsmith_Layout 1 10/27/11 10:27 AM Page 41
42 BioPhotonics November/December 2011
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BioPhotonics November/December 2011 43
BREAKTHROUGHPRODUCTS
Fiber-Coupled Multibar Modules
Dilas is offering higher-power fiber-coupled multibar
laser modules operating at 1940 nm. The high-
brightness, high-power modules feature a compact
footprint and deliver 30-W output through a 600-m
core diameter fiber with a numerical aperture of 0.22
and wall-plug efficiency of >10%. The designs are
based on industry-standard conductively cooled
bars that are optically stacked and polarization-coupled. The modules require
only industrial water for cooling. Custom wavelengths are available upon request.
The modules are suitable for direct diode applications such as medicine, defense
and welding of transparent plastics.
Dilas
sales@dilas.com
532-nm Laser
Laser Quantum has enhanced its Excel, a
continuous-wave 532-nm laser that outputs
up to 2 W while maintaining noise at <0.5% rms.
Compact and robust in design, its new intelligent
smd12 power supply allows operation in power
or current mode, with power stability of <0.4%.
The lasers low requirements for temperature
control and long warranty periods make it
suitable for scientific applications and integration
into other instruments. Applications include
particle image velocimetry, ophthalmology and microscopy.
Laser Quantum
sales@laserquantum.com
Polarization Imaging
Bossa Nova Technologies LLC has released a full Stokes polariza-
tion imaging camera. Salsa performs live measurement of the full
Stokes vector, including the fourth parameter S3, related to circular
polarization. Dedicated software provides live images of any derived
parameters, such as the degrees of linear and circular polarization,
the angle of polarization and the ellipticity angle. In-house calibration
enables accurate polarization measurements below 1% rms deviation.
Measuring 3.2 3.2 4 in., the robust camera features a 1-mega -
pixel, 12-bit CCD sensor, standard C-mount lenses and a proprietary
fast polarization modulator. The camera operates at up to 12 fps
in polarization imaging mode and is suitable for use in a variety
of applications, including biomedical imaging.
Bossa Nova Technologies LLC
info@bossanovatech.com
Digital Microscope Camera
For live-cell imaging applications, Leica Microsystems has unveiled the DFC365 FX digital microscope
camera. To document live cells and rapidly fading fluorescence specimens, it combines high-quality
imaging with high temporal resolution for rapid time-lapse recordings. It enables researchers to
work efficiently, even with weakly fluorescing specimens. Equipped with a sensitive CCD sensor with
6.45-m pixels and active Peltier cooling, it is suitable for applications ranging from basic fluorescence
documentation to total internal reflection fluorescence, Frster resonance energy transfer and struc-
tured illumination. It operates at acquisition rates of 21 fps at full resolution. In overlapping mode,
an image can be captured while the previous image is still being read out. Data is transferred to the
PC via a FireWire-B interface.
Leica Microsystems
valerie.nicolas@leica-microsystems.com
Photomultiplier Tubes
Hamamatsu Corp. has re-
leased the H11451 series
linear array photomultiplier
tube (PMT) modules. The
detectors offer high cathode
sensitivity, high gain and
high-speed response, with
fast rise time and a narrow
transit time spread. They
contain a multichannel PMT,
along with a preamplifier and
a high-voltage power supply
circuit. Applications range
from biomedical fluorescence
and laser scanning detection
to analysis, including spec-
tros copy and environmental monitoring. The series features eight channels
in a linear format, with each channels photosensitive area measuring
2 2.5 mm. The modules are characterized by good anode uniformity,
low crosstalk and a rise time of 0.7 ns. Two spectral response ranges
are available: 300 to 880 nm (peak at 420 nm) and 300 to 920 nm (peak
at 630 nm).
Hamamatsu Corp.
usa@hamamatsu.com
Fluorescence Illumination
For fluorescence microscopy and live-cell imaging
applications, Lumen Dynamics Group Inc. has un-
veiled the X-Cite XLED1, a high-power LED illumina-
tion solution offering advanced triggering capabilities
that enable precise time control for high-speed image
automation. It provides instant switching of wave-
lengths and fast LED pulsing for greater data integ -
rity. The system is used for excitation or photolysis.
The touch-screen control panel provides a simple
and precise method to control the device and to save
protocols for multiple experiments. With optimized
excitation through high-power LEDs via narrow
spectral profiles, the XLED1 delivers maximum
illumination right at the sample plane. Providing
fine light intensity control, the system gives research -
ers full control for achieving optimal imaging.
Lumen Dynamics Group Inc.
ada.nowensky@ldgi.com