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N. GRAY
M. CALVIN
S.C. BHATIA
;I
Alkern Company (S) Pte Ltd
Singapore
COLLEGE OF ENGINEERING LIBRARY I
UNIVERSITY OF THE PHILIPPINES DILlMAN
Enzymes Biotechnology
ISBN: 9789810860882
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Preface
Enzymes are biological catalysts, or chemicals that speed up the rate of reaction between
substances without themselves being consumed in the reaction. As such, they are vital to such
bodily functions as digestion, and they make possible processes that normally could not occur
except at high temperatures when they would threaten the well-being of the body. A type of
protein, enzymes, sometimes work in tandem with non-proteins called co-enzymes. Among the
processes in which enzymes play a vital role is in fermentation, which takes place in the
production of alcohol or the baking of bread and also plays a part in numerous other natural
phenomena, such as the purification of waste-water.
Enzymes are special kinds of proteins that are found in all living matter. Man, animals,
plants-all living cells produce and need enzymes to live and grow. However, enzymes
themselves are not living organisms. Enzymes are catalysts substances which speed up
chemical reactions by being present in very small amounts and without being changed in the
reaction.
Modern biotechnology techniques are utilized to improve microbial production strains to
increase to enzyme yields and to make minor amino acid changes that improve the
functionality of the enzyme. These changes are not known to increase the ability of enzymes to
cause allergies.
This reference textbook is divided into five sections. Section I discusses about principles of
industria! enzyme production and utilization. Chapter 1 in ~his section is devoted to basic
concepts of enzymes. Chapter 2 deals with general characteristics of enzymes, such as structure,
mechanism and kinetics of enzymes. Chemical reactions, including those catalyzed by
enzymes, depend on environmental conditions. The emphasis in Chapter 3 is on micro and
macro environmental effects on environmental activity, and micro as well as
macroenvironmental effects. The dominant environmental factors affecting enzyme action are
pH, water activity and temperature. Chapter 4 concentrates on modern methods of enzyme
expression and design in a simplified and understandable manner- genetically engineered
products and amplification of genetic engineering for new food related applications. Chapter 5
deals with fermentation process design. The task of the fermentation technologist is to provide
and maintain the environment required for carrying out a desired biological process. Thus, a
well designed growth environment is needed to obtain the maximum economic yield of the
product and this task resolves into environmental design, determining the environmental
requirements of the process, and fermentation engineering, providing the means for meeting
those requirements of the process, and fermentation engineering. Chapter 6 has a focus on
extraction and purification of enzymes. Various mediums of extraction and purification are
discussed in detail.
N. Gray
M. Calvin
S.C. Bhatia
Contents at a Glance
Preface .................................................................................................................................................... v
SECTION I
Principles of Industrial Enzyme Production and Utilisation ..................................................... 1-99
Chapter
Chapter
SECTION II
Types of Enzymes/Classification of Enzymes ....................................................................... 101-272
Chapter
Chapter
Chapter
SECTION III
Application of Enzymes in Industry .......................................................................................... 273-508
x Contents at a Glance
Chapter 17. Brewing ..................................................................................................................... 368-381
Chapter 18. Fish Processing and Meat Industry ......................................................................... 382-389
Chapter 19. Textiles and Laundry Detergents ............................................................................. 390-399
Chapter 20. Pulp and Paper ........................... ,.............................................................................. 400-413
Chapter 21: Tanning Industry ....................................................................................................... 414-425
Chapter 22. Clinical Analysis ...................................................................................................... 426-456
Chapter 23. Enzymes in Organic Synthesis ................................................................................ 457-481
Chapter 24. Enzymes and Bioremediation ................................................................................... 482-508
SECTION IV
Instrumental Techniques Used in Enzyme Analysis ............................................................ 509-551
Chapter 25. Instrumental Techniques in Enzymatic Analysis .................................................... 511-523
Chapter 26. Enzyme Thermistors for Food Analysis ................................................................. 524-534
Chapter 27. Enzyme Electrodes for Food Analysis .................................................................... 535-551
SECTIONV
Special Topics ................................................................................................................................ 553-575
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Contents
Preface ................................................................................................................................................... v
Contents at a glance .. ............................. .. ... ........ .. ............. ... . .. .. ... ... ... ... .. ... .... .. . .. . .. .. .. .... .. ... .. ......... .. ..
IX
SECTION I
Principles of Industrial Enzyme Production and Uti/isation ..................................................... l-99
1.
2.
3.
4.
xii
Contents
Genetic Engineering ..................................................................................................................... 51
Commercialisation of Genetically Engineered Products .............................................................. 61
Implications for the Future ........................................................................................................... 67
5.
6.
SECTION II
8.
9.
Contents
xiii
SECTION III
Application of Enzymes in Industry .......................................................................................... 273-508
11.
14. Pectic Enzymes in Fruit and Vegetable Juice Manufacture ........................................... 318-341
Introduction ................................................................................................................................... 318
Pectic Substances and Pectic Enzymes ...................................................................................... 318
Occurrence and Microbial Production of Pectic Enzymes ......................................................... 320
xiv
Contents
Food-Processing-Related Properties ofPectic Enzymes ............................................................ 321
Methods Used in Technological Pectic Enzyme Research ........................................................ 325
Use of Commercial Fungal Enzymes as Processing Aids .......................................................... 327
Quality Aspects of Clear Fruit Juices Obtained by Enzyme Treatment of Juices or Pulp .......... 333
Technological Functions ofEndogenous Pectic Enzymes ......................................................... 337
Contents
xv
Recent Advances in the Application of Enzymes for Paper and Pulp ......................................... 409
Prospects of Genetic Engineering in Bioconversion .................................................................. 411
22.
24.
SECTION IV
Instrumental Techniques Used in Enzyme Analysis ............................................................ 509-551
xvi
Contents
SECTIONV
Special Topics ................................................................................................................................ 553-575
29. Economic Considerations for the Use of Technical Enzymes ........................................ 566-569
Introduction ................................................................................................................................... 566
Increasing Yields and Improving Raw-materials Utilisation ..................................................... 566
Lowering Costs .......................................................................................................................... 567
Altering Technical Properties ....................................................................................................... 567
Improving Preservation, Flavour and Cleansing Action ............................................................ 567
Market ofTechnical Enzyme Preparations ................................................................................. 569
SECTION I
Principles of Industrial Enzyme
Production and Utilisation
1. Basic Concepts of Enzymes
2.
'
G~~eral
Characteristics of Enzymes
3
8
32
48
69
86
Life on earth is based on constant change. Inorganic matter forms the complicated structures that make
up the living world, which will again decay into lifeless matter. The lives of plants, animals and human
beings are included in this great cycle. The inert substances that form the foundation of life have a very
simple structure. Water. carbon dioxide and nitrogen are the basic ingredients that, with the ~nergy
supplied by sunlight, permit plants to synthesise the molecular moieties that support life. These compounds
are 1:1en used to provide more elaborate compounds required by animal life.
The use of enzymes and micro-organisms in processing raw materials from plants and animals has
oeen practiced for a long time. At one time, living micro-organisms were used predominantly. Traditional
processes, such as the production of alcoholic beverages and yeast-fermented doughs in baking bread,
are displayed in Egyptian wall paintings. Further examples are the processes for preserving food, such
as vegetable conservation by fermentation with lactobacilli, or preserving milk by making cheese.
Chemical !xperiments have shown how specific compounds. namely, the essential amino acids, can .
be generated from simple mixtures of carbon, nitrogen, oxygen and hydrogen when subjected to extreme
pressures and temperatures. Once formed, less extreme conditions can cause the degradation of these
complex structures as well. Under the current global conditions, such processes proceed only very
slowly. What, then, causes the rapid synthesis of these compounds that are essential for life and the
degradation ofthe high-molecular-weight and highly organised structures that make up life? The catalysts
for this assembly and disassembly were for a long time thought to be life itself, or rather a fundamental
principle of living cells.
The first observation of an enzymatic degradation reaction was by Spallanzani, a priest and naturalist
for Padua, Italy. After placing meat in small porous capsules, he examined the regurgitated pellets of the
hawks who had eaten this material and found the capsules to be empty, proving that the meat had been
rapidly liquefied by the stomach juices of these birds of prey.
Later, Kirchhoff found that barley contained a substance that was capable of liquefying starch paste
into sugar. He assumed that the reaction was caused by the gluten protein of the barley. Subsequently,
Payen and Persoz termed the working principle of this saccharification diastase (Greek for separation),
a term still used for the amylases in the brewing industry. The degradation of starch, which is composed
of sugar moieties and the subsequent process of alcoholic fermentation of the sugar into carbon dioxide
and alcohol occupied much of this nineteenth-century chemist's time.
I
Enzymes Biotechnology
Pasteur showed that fennentation is closelv associated with live veast. He distinguished between the
actions of 'organised ferments' (cellular) and the 'unorganised ferments (soluble). These soluble
ferments'. which are not bound to the living ceiL were labelled enzymes by KUhne. This tennis derived
from the Greek enzyme. meaning 'in sour dough. Concrete evidence for this assumption was provided
by E. Buchner, as he showed that the cell-free extract from yeast cells could also produce alcohol from
sugars. The enzyme active in fennentation was tenned zymase. The first book summarising the 'wonderful
mechanism of the enzymes known at that time and outlining the history of their discovery was written
by Green and is still read with interest today.
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If acetic acid and alcohol are mixed in equimolar amounts. some ofthe molecules will react to fonn
an ester and water (synthesis). Yet. there still will be significant quantities of acetic acid and alcohol in
the reaction mixture as ';'ell as the products generated, ester and water. A mixture of the same composition
can also be obtained when starting with water and an ester (hydrolysis). Even in the absence of a
catalyst. the reactions reach equilibrium between ester and synthesis and ester hydrolysis.
When forming and splitting butyl ester. it was found that the equilibrium was rapidly established
from either direction on the addition of porcine pancreatic powder (pancreatic lipase). Thus. for life to
exist, the biochemical equilibria of essential and exceedingly complex reaction systems must be
established rapidly. Therefore, enzymes are the vital catalysts in all life processes.
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it has largely been replaced by the development of the submerged fermentation process carried out in
large fermenters.
Auguste Boidin discovered a new process for the manufacture of alcohol from cereals. Known as
the amyloprocess, this method involves the extraction of cereal polysaccharides by boiling, then
inoculation with a fungus that, in turn. produces saccharifying enzymes and subsequently yeast
fermentation of the sugars. Boidin and Professor Jean Etfront who had studied enzymes involved in
alcohol production since 1900, founded the Societe Rapidase in 1920.
Enzyme preparations from animal organs also continue to play an important industrial role. Otto
Rohm discovered the effectiveness of pancreatic proteases in liming and bating of hides in leather
manufacture. Until then, slurries of dog feces had been used in bating. Rohm concluded that the bating
effect of dog feces was due to excreted pancreatic proteases and subsequently developed the first
standardised enzymatic bating agent that marketed under the name oropon', offered the tanner greater
control and reliability in the sensitive leather manufacturing process.
Otto Rohm developed additional uses for the pancre1tic enzymes he manufactured in Darmstadt.
including the degumming of raw silk. The importance of these enzymes for the silk industry at that time
can be shown by the following cost computation: 'One kilogram Degomr .. a S (pancreatic protease)
with a value of 4 [Reichsmark] can degum the same amount of silk as I 0 kilograms of expensive
Marseilles soap' (at that time 2-3 reichsmarks per kilogram). Rohm introduced the first commercially
enzymatic detergent. The product, named Burnus'. rapidly became known as a good prewash and
soaking agent. In addition to pancreatic enzymes, it contained sodium carbonate and sodium bicarbonate,
which held the pH in the wash water below 9. The pancreatic proteases are sufficiently active and stable
at low temperatures in this pH range. However, pancreatic enzymes are inactive in new detergent
formulations that contain sequestrants, anionic detergents and oxidising agents.
Jaag in Switzerland developed a detergent that contained, as active components, proteases from
Bacillus subtilis. The Novo Company [NO] in Copenhagen deserves credit for the subsequent
development of this enzyme. This will be discussed in more detail later. Plant enzymes, especially the
proteases fr8m papaya fruits (i.e. papain), are industrially important. Wallerstein was the first to use
papain for stabilising beer. Beer stabilisation. which prevents protein flocculation or hazing on
refrigeration, is particularly important in the United States, where beer is cold-stored.
Boidin and Effront obtained a process patent for manufacturing an enzyme preparation from cultures
of B. subtilis, grown on the surface of a liquid nutrient medium. The preparation primarily contained
amylase, which was able to replace the malt that previously had been used in textile sizing.
Rohm and Haas began producing fungal proteases with semisolid cultures. These enzymes produced
gentle bating preparations suited tor special applications in leather manufacture. About 1934, the first
pectinase preparations for clarifying fruit juices and improving juice extraction from grapes were produced
by the same method.
In 1958, Underkot1er published a list of commercial enzyme preparations. The most important products
were the amylases that were used in bakeries and breweries and in the manufacture of starch hydrolysates.
Second were the microbial proteases, which were used in leather manufacture and in removing ~azes
from cold beer. Other enzymes such as pectinases, lactases, invertases. lipases, and cellulases were.
however. produced only in small quantities. The years following World War II saw a rapid development
of submerged fermentation technology, triggered by the then-extant antibiotic manufacturing methods.
Bacterial and fungal amylases could now be manufactured inexpensively. This had a great influence on
the commercial development of enzymatic starch conversion to dextrins and glucose.
Enzymes Biotechnology
In 1960, Novo Nordisk [NO] began production of alkaline bacterial proteases from Bacillus
licheniformis for use in detergents. A flurry of activity followed that led to a wave of innovations in the
entire field of industrial enzymes.
The commercial development of alkaline bacterial proteases was briefly interrupted when cases of
lung disease, due to allergic reactions, were reported in the United States. These allergies occurred in
workers who had direct contact with dusty enzyme concentrates during detergent manufacture.
Granulating the concentrates helped avoid these risks. In 1971, The National Academy of Sciences
(USA) confirmed that the use of detergents containing enzymes posed no health hazard to the consumer.
Proteases from B. lichemformis are currently the commercially most important microbial enzymes.
They represent approximately 60 per cent of all the industrial enzymes, followed by the carbohydrates
making up about 30 per cent. The latter include the amylases, glucose isomerases, pectinases and
cellulases.
The development of other industrial enzymes will be discussed in subsequent chapters.
APPLICATIONS OF MODERN ENZYME TECHNOLOGY
Major targets of modern enzyme technology continue to be preservation of foods and food components
(e.g. vitamins), more efficient use of raw materials and improvement offood quality such astexture and
taste. Enzymes are also used in the food industry for process optimisation to reduce process costs,
including energy requirements. Other current objectives include the utilisation of new raw materials for
feeding humans and animals, the manufacture of dietetic foods and eliminating antinutritive substances
from certain nutritional raw materials.
Biotechnological methods have also replaced some of the traditional chemical processes. Enzymatic
methods, which include the most recent procedures with immobilised enzymes and immobilised microorganisms, constitute only one aspect of modern biotechnology. Biotechnology encompasses many
processes for producing biologically active compounds, such as amino acids and antibiotics as well as
processing waste-water..,
Examples of new biotechnological processes include:
1. The use of enzymes in nonaqueous media for the production of chiral compounds and the
synthesis of special polymers.
2. The use of enzymes for the synthesis of amino acids, peptides and antibiotics.
3. The use of enzymes for recycling food wastes and in waste-water treatment.
4. The production of sweeteners, such as aspartame, using combined microbiological and enzymatic
methods.
5. The production of cyclodextrins from starch with specific enzymes.
6. The use of cellulases and lipases as active components of detergents.
7. The production of rare and expensive mammalian enzymes by micro-organisms. For example,
pure calf stomach rennet is currently not available in sufficient quantities.
8. The production of tailored enzymes to serve as specific, process-adapted catalysts. These
procedures are part of the so-called protein engineering, which means the design of proteins
with specific functions.
9. Large-scale production of enzymes by gene technology is to be expected in future years;
recombinant chymosin was a pioneering first. It has since overcome the world shortage of
chymosin in the cheese industry. Thus, many limited or costly traditional enzyme sources will
be replaceable.
In the past, obtaining the desired metabolites and improved performance depended on the conventional
genetic methods of inducing mutations and hybridising sexually propagating micro-organisms. In
asexually reproducing micro-organisms, physical and chemical mutagenesis produced the necessary
variability. The sought-after characteristic or product was subsequently found by screening large numbers
of progeny. Mutations randomly alter the genetic or hereditary information. Success depends on whether
one of the random mutations occurs at the correct site within the genome; only then will it be possible
to develop better microbial strains. The extensive screening required makes it very expensive to determine
whether such randcru mutations have produced the changes sought in the production of the desired
substance. Now, gene technology permits site-specific changes and yields products of great purity under
economically feasible conditions .
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