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OPOSSUM

Target Gene: Foxd1


Gene ENSMODG00000027859
Location Chromosome 3: 47,853,439-47,854,944
Gene type Known by_projection protein_coding
Strand Reverse
Analysis Ensembl Gene
Prediction method Annotation produced by the Ensembl genebuild.
Next Upstream Gene: BTF3
Gene ENSMODG00000001762
Location Chromosome 3: 47,885,076-47,895,472
Gene type Known by_projection protein_coding
Strand Forward
Analysis Ensembl Gene
Prediction method Annotation produced by the Ensembl genebuild.
5' Flanking sequence: 47,885,076 - 47,854,944 - 1= 30131

Note: There was no data for platyfish, but it appeared in the search engine
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RAT
Target Gene: Foxd1
Gene ENSRNOG00000043332
Location Chromosome 2: 47,561,301-47,562,668
Gene type Known protein coding
Strand Forward
Analysis Ensembl Gene
Prediction method Annotation produced by the Ensembl genebuild.
Next Upstream Gene: BTF3
Gene ENSRNOG00000016912
Location Chromosome 2: 47,518,639-47,525,723
Gene type Known protein coding
Strand Reverse
Analysis Ensembl Gene
Prediction method Annotation produced by the Ensembl genebuild.
5' Flanking sequence: 47,561,301 - 47,525,723 - 1 = 35577

*SPOTTED GAR
Target Gene: Foxd1
Exon ENSLOCE00000215462
Transcript ENSLOCT00000021686
Protein ENSLOCP00000021649
Gene ENSLOCG00000017544
Location Chromosome LG2: 45,096,709-45,097,722
Gene type Known by projection protein coding
Transcript type Known by projection protein coding
Strand Forward
Base pairs 1,014
Amino acids 337
Analysis Ensembl Transcript
Prediction method Annotation produced by the Ensembl genebuild.
Next Upstream Gene: BTF3
Transcript ENSLOCT00000013621
Protein ENSLOCP00000013592
Gene ENSLOCG00000011068
Location Chromosome LG2: 45,076,194-45,096,809
Gene type Known by projection protein coding
Transcript type Known by projection protein coding
Strand Reverse
Base pairs 5,702
Amino acids 172
Analysis Ensembl Transcript
Prediction method Annotation produced by the Ensembl genebuild.
5' Flanking sequence: 45,096,709 - 45,096,809 - 1 = -101
OVERLAPPING

Stickleback
Target Gene: Foxd1
Exon ENSGACE00000185539
Transcript ENSGACT00000020943
Protein ENSGACP00000020903
Gene ENSGACG00000015836
Location groupXIV: 1,333,739-1,334,674
Gene type Known by projection protein coding
Transcript type Known by projection protein coding
Strand Forward
Base pairs 906
Amino acids 302
Analysis Ensembl Transcript
Prediction method Annotation produced by the Ensembl genebuild.
Next Upstream Gene: BTF3
Transcript ENSGACT00000020941
Protein ENSGACP00000020901
Gene ENSGACG00000015834
Location groupXIV: 1,323,712-1,326,223
Gene type Known by projection protein coding
Transcript type Known by projection protein coding
Strand Reverse
Base pairs 948
Amino acids 164
Analysis Ensembl Transcript
Prediction method Annotation produced by the Ensembl genebuild.
5' Flanking sequence: 1,333,739 - 1,326,223 - 1 = 7515

TETRAODON (Pufferfish)
Target Gene: FOXD1
Exon ENSTNIE00000165563
Transcript ENSTNIT00000016641
Protein ENSTNIP00000016428
Gene ENSTNIG00000013433
Location Chromosome 4: 5,920,835-5,921,878
Gene type Known by projection protein coding
Transcript type Known by projection protein coding
Strand Forward
Base pairs 1,005
Amino acids 335
Analysis Ensembl Transcript
Prediction method Annotation produced by the Ensembl genebuild.
Next Upstream Gene: BTF3
Transcript ENSTNIT00000016642
Protein ENSTNIP00000016429
Gene ENSTNIG00000013434
Location Chromosome 4: 5,915,030-5,917,337
Gene type Novel protein coding
Transcript type Novel protein coding
Strand Reverse
Base pairs 969
Amino acids 169
Analysis Ensembl Transcript
Prediction method Annotation produced by the Ensembl genebuild.
5' Flanking sequence: 5,920,835 - 5,917,337 - 1= 3497

Tilapia
Target Gene:Foxd1
Exon ENSONIE00000264735
Transcript ENSONIT00000025836
Protein ENSONIP00000025815
Gene ENSONIG00000020510
Location Scaffold GL831211.1: 1,237,242-1,238,279
Gene type Known by projection protein coding
Transcript type Known by projection protein coding
Strand Reverse
Base pairs 1,038
Amino acids 346
Analysis Ensembl Transcript
Prediction method Annotation produced by the Ensembl genebuild.
Upstream Gene: BFT3
Transcript ENSONIT00000014067
Protein ENSONIP00000014057
Gene ENSONIG00000011166
Location Scaffold GL831211.1: 1,245,359-1,250,215
Gene type Known by projection protein coding
Transcript type Known by projection protein coding
Strand Forward
Base pairs 501
Amino acids 166
Analysis Ensembl Transcript
Prediction method Annotation produced by the Ensembl genebuild.
5' Flanking sequence: 1,245,359 - 1,238,279 = 7079

XENOPUIS TROPICALIS (Western Clawed Frog) [wfrog]


Target Gene: Foxd1
Gene ENSXETG00000016818
Location Scaffold GL172749.1: 1,113,757-1,114,746
Gene type Known protein coding
Strand Reverse
Analysis Ensembl Gene
Prediction method Annotation produced by the Ensembl genebuild.
Next Upstream Gene: BTF3
Gene ENSXETG00000016819
Location Scaffold GL172749.1: 1,131,560-1,137,384
Gene type Known protein coding
Strand Forward
Analysis Ensembl Gene
Prediction method Annotation produced by the Ensembl genebuild.
5' Flanking Sequence: 1,131,560 - 1,114,746 - 1 = 16813

Zebra Finch (zebrafinch)


Target Gene:
Exon ENSTGUE00000059267
Transcript ENSTGUT00000006066
Protein ENSTGUP00000006007
Gene ENSTGUG00000005846
Location Chromosome Z: 66,572,370-66,573,470
Gene type Known by projection protein coding
Transcript type Known by projection protein coding
Strand Reverse
Base pairs 933
Amino acids 310
Analysis Ensembl Transcript
Prediction method Annotation produced by the Ensembl genebuild.
Next Upstream Gene: BTF3
Transcript ENSTGUT00000006090
Protein ENSTGUP00000006032
Gene ENSTGUG00000005853
Location Chromosome Z: 66,583,721-66,591,062
Gene type Known by projection protein coding
Transcript type Known by projection protein coding
Strand Forward
Base pairs 921
Amino acids 162
Analysis Ensembl Transcript
Prediction method Annotation produced by the Ensembl genebuild.
5' Flanking Sequence: 66,583,721 - 66,573,470 - 1 = 10250