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[BIO-PHYSICS
APPLICATIONS IN
BIO-MEDICAL
ENGINEERING, PART-1
]
[NOTES ON BIO-PHYSICS IN BIO-MEDICAL
ENGINEERING]
[TEXT-BOOK NAME: INTRODUCTORY-BIO-PHYSICS BY FREDERICK-ROSSHALLELT,P.A.SPEIGHT,ROBERT-HENRY-STINSON-WG. ]
[MOHAMMAD-SIKANDER-KHAN-LODHI]
[BIO-MEDICAL-ENGINEERING GUIDE.INC BY SIKANDER-LODHI]
3/14/2013
BIO-PHYSICS NOTES:
Contents
STRUCTURE-OF-ATP:- ........................................................................................................................... 2
HOW-ATP-WORK-IN-MUSCLES:- ......................................................................................................... 4
TRANSPORTATIONS-ACROSS-THE-BIOLOGICAL-MEMBRANE:- .................................................................... 5
EAR: [ SENCE-OF-HEARING ] ......................................................................................................................... 7
SENCE-OF-EQUILIBRIUM :- ......................................................................................................................... 10
SENCE-OF-TASTE:- ....................................................................................................................................... 11
ANATOMY-OF-EYE:...................................................................................................................................... 14
Page 2
Phosphorylation-process.
Chemeosmosis-process.
A. PHOSPHORYLATION-PROCESS:a) In phosphorylation-process the hydrogen-ion [H+ ion ] have only one proton [ positivecharge (+ve )] in its ionic-structure.
b) This hydrogen-proton [H+ ion] combine with oxygen molecules [ O2 (g) ] inside the
mitochondria and produce H2O[l] +
[biological-free-energy].
c) [
]
d) Now then, this free-energy[ ] cause to activated the ATP-synthetase-enzymemolecules;
e) Then, this activated-ATP-Synthetase-enzymes-molecules, cause to add ADP with
Inorganic-phosphate [Pi] which form ATP-molecules.
f) [
g) HOW-CELL-MAKE-ATP PHOSPHORYLATION:-
].
Page 3
HOW-ATP-WORK-IN-MUSCLES:-
Page 4
1
2
Passive-Transportations
1.
a.
b.
{:.
Active-Transportations
PASSIVE-TRANSPORTATIONS:-> it has two types a. simple-diffusions b. fascilated-diffusions
SIMPLE-DIFFUSIONS:-> its the movement of molecules from higher concentrations gradient to
lower-concentration gradient across the biological-cell membrane.
FASCILATED-DIFFUSIONS:->
The Transmembrane-protein create a water-filled pore through which ions and some small
hydrophilic [un-soluble in water] molecules can passes through cell membrane by diffusions [its
called as Fascilated-diffusion].
The channels can be opened or closed according to the needs of the cell.
is positive = +
:-> [
Where;
i.
ii.
iii.
iv.
v.
vi.
Page 5
]:-
];
];
];
];
Divide by 1000 to converted in Kcal/mole
];
];
CONCLUSION:- The
is negative, it shows us that, during the fascilated diffusion of glucose molecules,
the glucose molecules released some energy about
of glucose molecules.
--------2. ACTIVE-TRANSPORTIONS OR SODIUM[Na+]-POTASSIUM[K+]-PUMP :STATEMENT:
The transmembrane-protein called Transporter , used the energy from ATP to force ions or small
hydrophilic[un-soluble in water] molecules through [ in or out ] side the cell-membrane against there
concentration gradient.
FUNCTIONS OF ACTIVE-TRANSPORTTIONS: The Active-transport is the movement of molecules across a membrane that is used by energy
from ATP.
This energy which stored in the concentrations of the transmembrane-protein-molecules [
these transmembrane-protein-molecules are located on the surface of cell membrane and
working as a gates on cell-membrane].
This type of transport [ Active-transport or Na+/K+ pump ] require hydrolysis of ATP, when ATP is
hydrolysis so it gives energy to specific Transmembrane-protein molecules.
Page 6
EAR: [ SENCE-OF-HEARING ]
Ear is a receptor organ for both hearing and Equilibrium functions.
We divide the ear into three different parts 1. Outer[external]-ear, 2. Middle-Ear, 3. Inner-Ear.
1. OUTER [EXTERNAL] EAR:
The outer ear consists of i. Auricale[or Pinna] and ii. External-Orditery-Canal.
i.
ii.
Auricale[or Pinna]:-> the pinna is the outer projection, which function to collected sound
wave , Parts-Of-Pinna is Helix ; Helix:-> a. the outer border[or margin ] of pinna is called
helix, helix is consists of cartilages. b. in the lower end there is a down-ward fleshis
projection, which does not have cartilages is called lobules.
External-Orditery-Canal:-> it runs from the pinna to the tempanic membrane, the externalorditery canal contains modified sweats-glands, called ceruminous-gland which secrete
Cerumen which is also called ear-wax , External-Orditery-Canal is about 1 inch long and
inch wide , EAR-WAX [FUNCTION]:-> 1. It prevents[stop] the Incest from entering inside the
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TEMPANIC-MEMBRANE [ OR EAR-DRUM ]:
1. Tempanic-membrane [or ear-drum ] is a cone shaped membrane which lies in between[b/w] the
external ear and middle ear.
2. When ever a sound ringing in between 20 to 20,000 Hz [hertz ] then these sound wave travels
through [via] External-Orditery-Canal and strikes [or hit ] on the Tempanic-membrane then it
generates vibrations in Tempanic-membrane .
3. Then this vibrations transmitted to the Malleus which attach to the Tempanic-membrane [or
ear-drum ] .
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iii.
In the cochlea there is a system of three side by side coiled tubes 1. Scala-Vestibuli 2. ScalaMedia [ Cochlea-Duck] 3. Scala-Tempany.
Scala-Vestibuli and . Scala-Media [ Cochlea-Duck] are separated by reissner membrane [ or
Vestibular-Membrane ] and Scala-tympani[or Scala-Tempany] and Scala-media are separated by
basilar-membrane.
ORGAN-OF-CORTIA [ANATOMY]: Organ-of-cortia are the electro-mechanical sensitive
organs presents on the surface of Basilar-Membrane and it contain specialized receptors called
hear cells , which vibrates and generated nerves electrical impulses in response to produced
sound vibrations , sound vibrations enter inside Scala-Vestibuli through Oval-window, when
stapes move inward then endo-limph[fluid] flow towards Scala-Vestibuli and Scala-Media [
Cochlea-Duck] in a forward direction only , and when stapes move outwards then the fluid
Page 9
iv.
move backward as the result the vibration will be generated in the Endolimph[fluid] in scalavestibules and scala-media only, the basilar-membrane contain 20 to 30 thousand basilar-fibre
which grooming from every side of the cochlea , even near to the basilar-membrane then it will
be increase in its length and reached to the apex, the diameter of basilar-fibers increase from
base to apex, it depend upon length increase in basilar-fibers , the length of basilar-fibers
minimum at the base [ oval and round window] and the length of basilar-fibers maximum at
the Apex [ center of Cochlea ] , the diameter of basilar-fibers maximum at the base and
minimum at the apex, the thickness of basilar-fibers minimum at the apex and maximum at the
base, high-frequency vibrations : the high frequency occurs near the base , low-frequency
vibrations : the low frequency occurs near the apex.
ORGAN-OF-CORTIA [or check it out -> cortai ] [PHYSIOLOGY=FUNCTIONS]: The organ of
cortai generates nerves impulses in response to the vibration produced by sound waves , in
endolimph [fluid] of the scala-media, its present on the surface of basilar-fibers and basilarmembrane, there are two types of hair-cells 1. Inner-hairs-cells, 2. Outer-hairs-cells INNERHAIRS-CELLS-> the hair-cells make the synapse with a network of cochlear-nerves, the nerve
fibers stimulated [ generated of action potential] which will lead to spiral-ganglion [or may be
gangilon ] of cortai . INNER-OUTER-HAIRS-CELLS-> Inner outer hairs cells nerve
fibersspiral-ganglions cochlear-nerves Auditory-cortex [ its a part of brain ].
------------------------------------HEARING-FINISHED-HERE----------
SENCE-OF-EQUILIBRIUM :VESTIBULAR- APPARATUS:-> the vestibular-apparatus has two parts 1. Bony-labyrinth, 2. Membraneslabyrinth , there are two types of equilibrium receptors 1. Macula [ Saccule and utricle ] , 2. Crista
Ampullaris [ In the end of semi-circular canal at Ampula ] .
MACULA : The Macula are present in saccule and utricle in the vestibules .
Macula is the smallest sensory area [ organ ] about size of 2mm present in saccule and utricle.
LINEAR-MOTION:STATICE-EQULIBRIUM [MACULA OF UTRICLE]:FUNCTION:->
Macula lies on the horizontal plane on the inferior surface of the utricle .
Macula determines position of head with respect to gravity when the person is in up-right [or
sitting straight or standing ] position.
Page 10
SENCE-OF-TASTE:Taste is a function of Specilized organs presents on the upper surface of tongs [ Dorsal-surface ] called
as Taste-buds
PRIMARY-SUNSATIONS[FEELING] OF TASTE :1. Sour-taste;
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SOUR-TASTE : The sour taste is caused by acid [H+ ions concentrations ] the feeling is directly proportional to
the H+ ions concentration, the lower the pH means that higher H+ ions concentration .
And tongs used H+ ions receptors which cause to detect the H+ ions concentrations on tongs
by lower pH;
The sour test is detected by hydrogen ions receptors , when the concentrations is high of H+ ions
so pH will decrease in tongs then these receptors indicated that this sour taste occur in tongs.
SALTY-TASTE:
This taste cause mainly by Na+ ions concentrations on our tongs , the receptor of sodium binds
with sodium ions so it give the salty feeling of taste to our brain.
SWEET-TASTE: Its caused by verity of chemicals and involve two types sweet receptors.
THE VERITY OF CHEMICALS CAUSED TO PRODUCED SWEETS TASTE IN TONG :
1. Sugars
2. Glycols
3. Alcholes
4. Aldehides
5. Ketones
6. Amides
7. Esters
Page 12
Amino-Acids
Poly-peptide
Sulfonic-acid
Halogenated Acid
Inorganic salts of lead and beryllium,
BITTER-TASTE:Bitter taste as like a sweets taste , its caused by verities of chemicals but most important are
1. Long chain organic substances that contain nitrogen,
2. Alkaloids
The bitter taste is senses [ feel ] by two types of bitter receptors ,
1.
2.
3.
4.
ANATOMY OF TASTE BUDS:The taste buds are founds on special structures called Papilla which are the projections of tongs
epithelium.
1. Circumvallate papilla [ on posterior tongs ];
2. Fungi from papilla [ anterior tongs ].
Page 13
---------------------
ANATOMY-OF-EYE:
ANATOMY OF EYE:
FEATURE OF EYE:
-->1).Flexible; -->2).formed of Protein; ->3).strong Accomedation Power; -->4).lens must be
spherical; -->5).20-Diopter's Required for the
normal Vission;
-->the eye is divided into 2-part's;
(i-e)=>a).external part; & =>b).internal part;
DIAGRAM OF EYE:
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A).EXTERNAL-PART:
-->The 1/6 portion of the external part of eye can
be Observed externally (about 1-inch & 2.5cm);
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i).ROD'S-CELL:
-->a).There are approximately 125-millions of
rods-cell are present in retina; -->b).the Rods cell
are spread through out the retina & its function
best in dim-lighting Vision; -->c).The Rods-cell
are responsible for night-vission;
ii).CONES-CELL:
-->a).The retina contain approximately 6-million's
of cone-cell's; -->b).The Cone's are contain in
macula(the part of retina responsible for central
vision); -->c).The Cones are most densely packed
with in the fovea,(fovea is the most center part of
macula);
-->d).Cones function best in Bright-light-vission;
1).IRIS OF EYE:
-->a).The coloured part of eye is called IRIS; ->b).The Iris controled the light intensity which
entering inside the eye;
-->c).The round opening in the center of Iris is
called "Pupil";
-->d).the iris is embedded with tiny muscle's that
controlled the size of "Pupil" by dilate & Constrict
the pupil size;
(i-e)
-->i).Sphincter-muscle; & -->ii).dilator-muscle;
[BIO-MEDICAL-ENGINEERING GUIDE.INC BY SIKANDER-LODHI]
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i).SPHINCTER-MUSCLE:
-->a).The Sphincter-muscle lie around the very
edge of the Pupil; -->b).In the prience's of
Bright-light the Sphincter-muscle would be contract
causing to reducing the size of pupil;
ii).DILATOR-MUSCLE:
-->a).The dilator-muscle runs radiolly through the
Iris,dilator-muscle cause to dilates the eye in Dimlighting; -->b).the colour of iris comes from
microscopic pigment cell called "Melanin-cell";
2).PUPIL:
-->a).the Pupil is the hole,which present at the
center of Iris;
-->b).The radius (or diameter) of pupil is controlled
by the iris muscle's during when the certain amount
of light passing through the pupil; -->c).the size of
Pupil determine that amount of light which entering
in the eye;
3).FLUID IN EYE'S:
-->i).In our eye there are 2-chamber's (ie)=>(a).anterior-chamber; & (b).posterior-chamber;
-->ii).In our eye there are 2-types of fluid (i-e)->(a).Aqueous-humar (In anterior-chamber); & ->(b).Viterous-humar(In posterior-chamber);
-->Aqueous-humar is fills in the space of anterior[BIO-MEDICAL-ENGINEERING GUIDE.INC BY SIKANDER-LODHI]
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chamber;
-->Viterous-humar is fills in the space of
posterior-chamber;
---------------------(contineously)--------------------a).AQUEOUS-HUMAR:
-->(i).The aqueous humar is the thin,wattery fluid
that fill's the space between the cornea & Iris(In
anterior-chamber);
-->(ii).The aqueous humar is Contineously produced
by the Ciliary-body; -->(iii).The ciliary-body is the
part of inner eye that lie's just behind the Iris;
b).VITEROUS-HUMAR:
-->(i).The Viterous-humar is the
thick,transparient,jelly like liquid substance that
fill's the
center of the eye,(In posterior-chamber); ->(ii).The Viterous-humar is Composed of mainly
of water;
-->(iii).The Viterous-humar give's the eye a form &
Shape by its Comprises about 2/3 of the
eye's Volume; -->(iv).The "Viscous-properties" of
the Viterous-humar allow the eye to return to its
Normal-shape if eye is Compressed;
[BIO-MEDICAL-ENGINEERING GUIDE.INC BY SIKANDER-LODHI]
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4).CILIARY-BODY:
-->(i).The Ciliary-body lies just behind the Iris; ->(ii).Tiny fiber "Guywires" known as the "Zonules"
is attached to Ciliary-body ; -->(iii).The Zonulesfiber's is attached with Ciliary-body & Crystallinelen's; -->(iv).The Crystalline-len's is Suspended
in-side the eye by the help of "Zonular-fiber";
a).FUNCTION OF CILIARY-BODY:
-->(i).Its function is the production of Aqueoushumar,the Aqueous-humar is the clear-fluid that
fills the Anterior-Chamber of eye;
-->(ii).Its also Control's "Accommodation" by
Changing the shape of crystalline len's;
-->(iii).when ciliary-body contracts,then Zonulesrelax,this allow's the len's to become thicken,which
cause to increase the eye's ability to focus up on
close Objects; -->(iv).When looking at a distant
objects the ciliary-body relaxes,causing the zonules
to contract,then the len's becomes thinner, which
cause to adjusting the eye's focus on distance
vission;
=>key-point=>with age,every 1 develop's a condition
known as "Presbyopia",this disease occur's when
ciliary-body muscle & len's gradually lose elasticity
causing difficulty in readying;
[BIO-MEDICAL-ENGINEERING GUIDE.INC BY SIKANDER-LODHI]
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5).FOVEA:
-->(i).In the Middle of retina there is a small
dimple called as "fovea";
-->(ii).the middle part of fovea is called as "foveacenterallis";
6).BLIND-SPOT OR OPTIC-DISK:
-->(i).The blind-spot is the point on retinasurface,where the optic-nerve goes towards the
brain;
-->(ii).the blind-spot does not have any rode's &
cone's;
7).TEAR-PRODUCTION-SYSTEM:
-->The eye's tear's are Composed of salt & antibacteria enzyme called as "lyzozome";
-->the tear production system,consisting of 4-part
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are as followed;
(i-e)=>-->(i).Lacrimal-gland; -->(ii).Lacrimalcanal; -->(iii).Lacrimal-sac; -->(iv).Lacrimal-duct;
=>(i).Lacrimal-gland:
-->the watery part of tear film is produced by
lacrimal-gland,this gland is located underneath of
outer orbital rim bone & the upper latteral portion
of eye;
-->then,now this watery part of tear film comes
down in eye,then the tear-film travel from the
superior & inferior lacrimal-canal through lacrimalsac to the lacrimal-duct,
the lacrimal-sac drain into lacrimal-duct which
connect's to nasal passage;
=>key-point=>this passage b/w the tear production
system & nose is the reasion in which when our nose
is running out during when we crying;
8).THE MUSCLE'S THAT CONTROLED THE
MOVEMENTS OF OUR EYE BALL:
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Our both eye's are held on that place where the 3pairs of stiff-elastic muscle's are presents,these
3-pairs of stiff-elastic muscle's are constantly
balance the pull of each other,
-->these 3-pairs of stiff-elastic muscle's are as
following;
-->(a).The superior & inferior rectus muscles; ->(b).The lateral & medial rectus muscles; ->(c).The superior & inferior oblique rectus muscle's;
FUNCTION:
The function of these 3-pairs of stiff-elastic
muscle's are given below;
(a).The Function Of superior & inferior rectus
muscles:
-->(i).The "superior-rectus-muscles" cause to roll
the eye ball back & vertically up-wards, --
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LIST OF FIGURES :-
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