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Version 2.0
This solutions manual may be downloaded and printed for personal use. It may not
be copied or distributed, in part or whole, without the permission of the authors.
Preface
We hope that this solutions manual will be a useful adjunct to Understanding NMR Spectroscopy
(2nd edition, Wiley, 2010) and will encourage readers to work through the exercises. The old adage
that practice makes perfect certainly applies when it comes to getting to grips with the theory of
NMR.
We would be grateful if users of this manual would let us know (by EMAIL to jhk10@cam.ac.uk)
of any errors they come across. A list of corrections will be maintained on the spectroscopyNOW
website
http://www.spectroscopynow.com/nmr (follow the link education)
Cambridge, March 2010
Contents
11
21
29
7 Product operators
35
8 Two-dimensional NMR
47
59
73
89
101
123
iv
CONTENTS
2
Setting the scene
2.1
ref
.
ref
ref
,
rx
with rx = 500.135 271 MHz gives the two shifts as 1.50 ppm and 7.30 ppm i.e. identical values
to three significant figures. To all intents and purposes it is perfectly acceptable to use Eq. 2.3 on
page 8.
The separation of the two peaks can be converted to Hz using Eq. 2.2 on page 7:
frequency separation in Hz = (1 2 ) ref (in MHz).
So the separation is
(7.30 1.50) 400.130 000 = 2321 Hz .
The conversion to rad s
2.2
For JAB = 10 Hz & JAC = 2 Hz, the line positions are 6, 4, +4, +6 Hz. For JAB = 10 Hz &
JAC = 12 Hz, the line positions are 11, 1, +1, +11 Hz; note that compared to the first multiplet
the two central lines swap positions. For JAB = 10 Hz & JAC = 10 Hz, the line positions are 10, 0,
0, +10 Hz; in this case, the line associated with the spin states of spins B and C being and , and
the line in which the spin states are and , lie of top of one another giving a 1:2:1 triplet.
JAB
JAB
JAB
JAC
JAC
-10
JAC
10
-10
JAB = 10 Hz JAC = 2 Hz
10
JAB = 10 Hz JAC = 12 Hz
-10
10
JAB = 10 Hz JAC = 10 Hz
Introducing a third coupling gives a doublet of doublet of doublets. The line positions are 1.5, 3.5,
6.5, 8.5 Hz. For clarity, only the spin state of the fourth spin, D, are shown by the grey-headed
arrows on the last line of the tree.
JAB
JAC
JAD
-10
10
2.3
1
= 4 108 Hz or 400 MHz.
2.5 109
1
4
7.85 104
=
= 12 494 Hz .
2
2
1
1
=
= 8.00 105 s .
12 494
2.4
(b)
(d)
y
= 135
= 0 or 2
= 3/2
x
x-comp.
y-comp.
time
For = 0 or 2 radians, the x-component is a cosine wave, and the y-component is a sine wave. For
= 3/2, the y-component is minus a cosine wave, and the x-component is a sine wave.
2.5
where to go to the second line we have used cos = 1 and sin = 0. So the y-component is indeed
r sin (t).
3
Energy levels and NMR spectra
3.1
The expression for H one spin is given by Eq. 3.2 on page 29:
H one spin = B0 Iz .
We need to work out the effect that H one spin has on 1/2 :
h
i
H one spin 1/2 = B0 Iz 1/2
h
i
= B0 21 ~1/2
=
1
1
2 ~B0 /2 .
To go to the second line we have used Eq. 3.3 on page 30 i.e. that 1/2 is an eigenfunction of Iz . The
wavefunction has been regenerated, multiplied by a constant; 1/2 is therefore an eigenfunction of
H one spin with eigenvalue 21 ~B0 .
3.2
The Larmor frequency, in Hz, of a nucleus with zero chemical shift is defined by Eq. 3.8 on page 32:
0
=
=
=
B0
2
6.7283 107 9.4
2
1.01 108 Hz or 101 MHz.
=
=
=
(1 + 106 )B0
2
6.7283 107 (1 + 77 106 ) 9.4
2
8
1.01 10 Hz .
This is an identical value to three significant figures. We need to go to considerably more figures
to see the difference between these two Larmor frequencies. To seven figures the frequencies are
1.00659 108 Hz and 1.00667 108 Hz.
3.3
0 Iz +1/2
1
1
2 0 + /2 ,
where the Hamiltonian has been expressed in angular frequency units. To go to the second line, we
have used the fact that +1/2 is an eigenfunction of Iz with eigenvalue + 12 .
In the same way,
H one spin 1/2 = 21 0 1/2 .
Hence, 1/2 are eigenfunctions of H one spin with eigenvalues 12 0 .
3.4
Following the approach in section 3.5 on page 35, we let the Hamiltonian act on the product
wavefunction:
H two spins, no coupl. ,1 ,2 = 0,1 I1z + 0,2 I2z ,1 ,2
= 0,1 I1z ,1 ,2 + 0,2 I2z ,1 ,2
h
i
h
i
= 0,1 I1z ,1 ,2 + 0,2 ,1 I2z ,2 .
To go to the third line, we have used the fact that I1z acts only on ,1 and not on ,2 . Similarly, I2z
acts only on ,2 .
Using Eq. 3.11 on page 35 i.e. that ,1 and ,2 are eigenfunctions of I1z and I2z , the terms in the
square brackets can be rewritten:
h
i
h
i
H two spins, no coupl. ,1 ,2 = 0,1 I1z ,1 ,2 + 0,2 ,1 I2z ,2
=
=
0,1 ,1 ,2 + 21 0,2 ,1 ,2
i
1
1
2 0,1 + 2 0,2 ,1 ,2 .
h2
1
4 J12 ,1 ,2 .
,1 ,2 is indeed an eigenfunction of the coupling term, with eigenvalue 41 J12 : this corresponds to
the energy.
H two spins, no coupl. and the coupling term share the same eigenfunctions (a result of the fact that the
two terms commute). Since the Hamiltonian for two coupled spins can be represented as the sum
of these two terms,
H two spins = H two spins, no coupl. + 2 J12 I1z I2z ,
it follows that it must also have the same eigenfunctions. Hence, ,1 ,2 is an eigenfunction of
H two spins with energy eigenvalue 12 0,1 + 12 0,2 + 41 J12 , i.e. the sum of the individual eigenvalues of
H two spins, no coupl. and J12 I1z I2z .
3.5
Reproducing Table 3.2 on page 38 for 0,1 = 100 Hz, 0,2 = 200 Hz and J12 = 5 Hz:
number
m1
m2
+ 21
+ 21
12
12
+ 12
12
+ 12
12
2
3
4
spin states
eigenfunction
eigenvalue/Hz
,1 ,2
,1 ,2
,1 ,2
,1 ,2
spin 1
spin 2
transition
spin states
frequency/Hz
12
E2 E1 = 197.50
34
E4 E3 = 202.50
13
E3 E1 = 97.50
24
E4 E2 = 102.50
flips
spin 1
spin 2
13 24
80
100
120
140
160
180
flips
12 34
200
220
frequency / Hz
m1
m2
spin states
eigenfunction
eigenvalue/Hz
+ 21
+ 12
,1 ,2
+ 21
12
,1 ,2
12
+ 12
,1 ,2
12
12
,1 ,2
spin 1
spin 2
flips
spin 1
spin 2
24 13
80
100
120
140
160
180
flips
34 12
200
220
frequency / Hz
The spectrum in unchanged in appearance. However, the labels of the lines have changed; the spin
state of the passive spin for each line of the doublet has swapped over.
3.6
The allowed transitions in which spin two flips are 12, 34, 56 and 78. Their frequencies are:
transition
frequency/Hz
12
34
56
78
The multiplet is a doublet of doublets centred on minus the Larmor frequency of spin two.
There are two lines associated with spin three being in the state, and two with this spin being in
the state. Changing the sign of J23 swaps the labels associated with spin three, but leaves those
associated with spin one unaffected.
12
56
spin 1
spin 3
34
56
78
12
spin 1
spin 3
0,2
190
195
J12
200
78
34
0,2
205
210
190
195
200
205
210
frequency / Hz
J23
J12 = 10 Hz J23 = -4 Hz
J12 = 10 Hz J23 = 4 Hz
3.7
initial state
final state
frequency
23
67
35
46
25
47
10
4
The vector model
4.1
eff
The offset of the peak is 5 ppm. This can be converted to Hz using Eq. 2.2 on page 7:
1 25 103 2 25
=
=
= 8.33,
3
3 103 2
so = 83 .
For a peak at the edge of the spectrum, the tilt angle is within 7 of that for an on-resonance pulse;
the B1 field is therefore strong enough to give a reasonable approximation to a hard pulse over the
full shift range.
For a Larmor frequency of 900 MHz, the peak at the edge of the spectrum has an offset of 4.5 kHz,
so the tilt angle is 80 . The larger offset results in the same B1 field giving a poorer approximation
to a hard pulse.
12
4.2
From Fig. 4.16 on page 58, the y-component of the magnetization after a pulse of flip angle is
M0 sin . The intensity of the signal will, therefore, vary as sin , which is a maximum for = 90 .
(a) If = 180 , the magnetization is rotated onto the z-axis. As sin 180 = 0, the signal intensity
is zero.
(b) If = 270 , the magnetization is rotated onto the y-axis. As sin 270 = 1, the signal will have
negative intensity of the same magnitude as for = 90 .
4.3
From Fig. 4.16 on page 58, the intensity of the signal is proportional to sin , where the value of the
flip angle is given by Eq. 4.5 on page 58:
= 1 tp .
The pulse lengths of 5 and 10 s correspond to flip angles below 90 . Increasing tp further causes
to increase past 90 , and so the value of sin (and hence the signal intensity) decreases. The null at
20.5 s corresponds to = 180 .
From the expression for the flip angle, it follows that = 1 t180 . Therefore,
1 =
t180
Another way to answer this question is to see that since a 180 pulse has a length of 20.5 s, a
complete rotation of 360 takes 41.0 s. The period of this rotation is thus 41.0 s, so the frequency
is
1
= 2.4 104 Hz .
41.0 106
This frequency is 1 /2, the RF field strength in Hz.
The length of the 90 pulse is simply half that of the 180 pulse:
t90 =
1
2
20.5 = 10.25 s.
The further null occurs at a pulse length that is twice the value of t180 . This corresponds to a flip
angle of 360 , for which the magnetization is rotated back onto the z-axis.
13
4.4
-y
-y
-y
180 pulse
-y
about y
-y
starting
position
-y
x
resolved into x- and
y- components
x
components after
180 pulse
final
position
The vector has been reflected in the yz-plane, and has a final phase of 2, measured anti-clockwise
from the y-axis.
x
-y
phase,
2
3/2
/2
180o(y) pulse
4.5
3/2
= 2
/2
=
time
The spin echo sequence 90 (x) 180 (x) results in the magnetization appearing along the
y-axis. In contrast, the 90 (x)180 (y) sequence results in the magnetization appearing along
the y-axis. Shifting the phase of the 180 pulse by 90 thus causes the phase of the magnetization
to shift by 180 .
A 180 (x) pulse rotates the magnetization in the opposite sense to a 180 (x) pulse, but the net effect
is still to reflect the magnetization vectors in the xz-plane. The sequence 90 (x) 180 (x)
will, therefore, have the same effect as the 90 (x) 180 (x) sequence i.e. the vector appears
on the y-axis at the end of the sequence.
14
4.6
From section 4.11 on page 67, the criterion for the excitation of a peak to at least 90% of its
theoretical maximum is for the offset to be less than 1.6 times the RF field strength. The Larmor
frequency of 31 P at B0 = 9.4 T is:
0 =
B0
1.08 108 9.4
=
= 1.62 108 Hz or 162 MHz.
2
2
If the transmitter frequency is placed at the centre of the spectrum, the maximum offset is
approximately 350 ppm. In Hz, this is an offset of
4.7
.
tp
15
4.8
q
21 + 2 .
21 + 2 21 = 1 1 + 2 .
(4.1)
,
2tp
1 + 2 .
2tp
Therefore the angle of rotation about the effective field, eff tp , is given by
eff tp
=
=
1 + 2 tp
2tp
1 + 2 .
2
The null condition is when there is a complete rotation about the effective field i.e. eff tp = 2:
2 =
1 + 2 .
2
1 + 2
i.e. =
15 or =
15 1 ,
63 .
For large offsets, 1, so 1 + 2 . The general null condition is eff tp = 2n, where n =
1, 2, 3, . . . Combining these two conditions gives
2n =
for which we find = 4n.
1 + 2 ,
2
2
16
4.9
In section 4.11.3 on page 70, it was demonstrated that, on applying a hard 180 pulse, the range of
offsets over which complete inversion is achieved is much more limited than the range over which
a 90 pulse gives significant excitation. Therefore, only peaks with small offsets will be inverted
completely. Peaks with large offsets will not exhibit a null on the application of the 180 pulse.
4.10
The initial 90 (x) pulse rotates the magnetization from the z-axis to the y-axis; after this the
evolution in the transverse plane is as follows:
-y
delay
-y
90(+x)
-y
The x-, y- and z-components after each element of the pulse sequence are:
component
after
M0 sin
M0 sin
M0
M0 cos
M0 cos
The final pulse is along the x-axis, and so leaves the x-component of the magnetization unchanged,
but rotates the y-component onto the z-axis. The overall result of the sequence is My = 0 and
M x = M0 sin .
M0
Mx
/2
3/2
-M0
17
4.11
The initial spin echo sequence refocuses the offset, and aligns the magnetization along the y-axis.
If the final pulse is about the y- or y-axis, then it has no effect on the magnetization as the vector
is aligned along the same axis as the B1 field. The magnetization remains along y.
If the final pulse is about the x-axis, then it rotates the magnetization from the y-axis to the z-axis.
Overall, the sequence returns the magnetization to its starting position.
If the final pulse is about the x-axis, then the magnetization is rotated from the y-axis to the
z-axis. Overall, the magnetization has been inverted.
4.12
The initial 90 (x) pulse rotates the magnetization from the z-axis to the y-axis. For on-resonance
peaks, = 0, so the magnetization does not precess during the delay . The final 90 (x) then
simply undoes the rotation caused by the first pulse. Overall, the magnetization is returned to its
starting position.
= /2. During the delay, the magnetization rotates to the x-axis and is therefore not affected by
the final 90 (x) pulse. The net result is that the magnetization appears along the x-axis.
= . During the delay, the magnetization rotates onto the y-axis. The final pulse rotates the
magnetization onto the z-axis. The equilibrium magnetization is inverted: no observable transverse
magnetization is produced.
=0
-y
delay
= /2
-y
-y
/2
-y
90(-x)
x
delay
-y
-y
-y
delay
90(-x)
90(-x)
-y
-y
The overall effect of the sequence is to produce x-magnetization which varies as M0 sin().
18
M0
Mx
/2
3/2
-M0
To suppress a strong solvent peak, it is placed on-resonance. The delay is then chosen so that
av = /2, where av is the average value of the offset of the peaks we wish to excite.
4.13
The initial 90 pulse rotates the equilibrium magnetization to the y-axis; from there the magnetization precesses about the z-axis through an angle of . The 90 (y) pulse rotates the x-component
of the magnetization onto the z-axis.
-y
delay
-y
90(y)
-y
My
/2
3/2
-M0
19
4.14
Line A is on-resonance, so its magnetization does not precess during the delay . The pulse sequence
is, effectively, a 180 (x) pulse, and so the magnetization is inverted.
For line B, the x-, y- and z-components of the magnetization after each element of the sequence are:
component
after
M0 sin
M0 sin
M0
M0 cos
M0 cos
The final pulse is along the x-axis, so leaves the x-component of the magnetization unchanged.
Substituting in the values of and we find (note that the offset of 100 Hz has to be converted to
rad s1 ):
Mx
Mz
My = M0 cos .
My
My
The two magnetization vectors rotate at the same rate in the opposite sense. After a delay of
= 5 ms, they are both aligned along the x-axis, but pointing in opposite directions.
20
5
Fourier transformation and data processing
5.1
One desirable feature of the dispersion lineshape is that it crosses the frequency axis at the frequency
of the transition. This allows for a more accurate measurement of the chemical shift than might be
possible for the absorption lineshape, especially in the case of broad lines.
In a spectrum containing many peaks, the following features of the dispersion lineshape make it
undesirable:
It is broader than the absorption lineshape the long dispersive tails may interfere with
nearby, low intensity peaks.
It is half the height of the absorption lineshape the SNR is therefore reduced by half.
The positive part of one peak may be cancelled by the negative part of an adjacent one in a
complex spectrum, the result can be very difficult to interpret.
5.2
S0
S 0R
=
.
2R R2 + 2
Cancelling the factor of S 0 from both sides and inverting the quotient, we obtain
2R =
R2 + 2
.
R
Hence,
2
2R2 R2 = R2
R .
22
5.3
dD()
= 0,
d
2 R2
= 0.
(R2 + 2 )2
The denominator is always non-zero, so the equation can be solved by setting the numerator to
zero:
2 R2
0
R .
R
1
= .
2R
2R2
These values are the maximum and minimum heights in the lineshape.
There are two values of at which D() is half its maximum positive height. At these frequencies,
D() = 1/(4R). Hence,
1
=
.
2
2
4R
R +
Inverting the quotients we obtain,
R2 + 2
= 4R,
so,
2 + 4R + R2 = 0.
This is a quadratic equation in that can be solved by applying the usual formula:
3) .
The width, Wdisp , is the distance between the outer two half-maximum points, as shown in the
diagram. Its value is
23
R(-2+3)
1/(2R)
Wdisp
R(2+3)
R(2-3)
-R
R(-2-3)
1/(4R)
For comparison, the width of the absorption mode is Wabs = 2R. Therefore, the ratio Wdisp /Wabs =
2 + 3 3.7 . The dispersion lineshape is almost four times wider than the absorption lineshape.
24
5.4
y
= 3/4
(a)
(b)
= 3/2
Sx
Sx
Sy
real
imag
Sy
real
y
(c)
imag
y
(d)
= 2
= 5/2
x
Sx
Sx
Sy
real
imag
Sy
real
imag
5.5
A 90 (x) pulse rotates the equilibrium magnetization onto the y-axis. The resulting spectrum is
phased to absorption, so that magnetization along y can be said to have a phase = 0.
A 90 (y) pulse rotates the equilibrium magnetization onto the x-axis. This corresponds to a phase
shift of = /2 with respect to the initial experiment.
90(x)
25
90(y)
real
real
(a)
90(-x)
(b)
270(x)
real
real
(a) Applying the pulse about x rotates the magnetization vector onto y. This corresponds to a
phase shift of = , therefore the spectrum will exhibit a negative absorption lineshape.
(b) A 270 (x) pulse is equivalent to a 90 (x) pulse. The spectrum will be the same as in (a).
5.6
26
5.7
The intensity of the noise in the spectrum depends on both the amplitude of the noise in the timedomain, and the acquisition time. So, recording the time-domain signal long after the NMR signal
has decayed just continues to measure noise and no signal. The resulting spectrum will consequently
have a lower SNR than it would for a shorter acquisition time.
A full discussion on how line broadening can be used to improve the SNR is given in section 5.4.3
on page 92; the matched filter is discussed in section 5.4.4 on page 94.
5.8
Shortening the acquisition time discards the time-domain data that contains mostly noise and little
signal. Applying a line broadening weighting function does not discard this section of the timedomain, but reduces its amplitude relative to the earlier part of the FID. Thus, both methods reduce
the intensity of the noise in the spectrum.
5.9
Enhancing the resolution of the spectrum by the use of a weighting function that combines a rising
exponential and a Gaussian is discussed in section 5.4.5 on page 94.
Zero filling improves the definition of the line in the spectrum by increasing the density of data
points in the frequency domain. However, it does not improve the fundamental linewidth as no real
data is added to the time-domain.
5.10
Plots of the sine bell weighting functions are given in Fig. 5.21 on page 98.
A sine bell that is phase-shifted by 45 initially increases over time, therefore partly cancelling the
decay of the FID; the linewidth of the spectrum will therefore be decreased. The subsequent decay
of the sine bell attenuates the noise at the end of the time-domain. The overall effect will be to
enhance the resolution, assuming that the original FID has decayed close to zero by the end of the
acquisition time.
The sine bell with a phase shift of 90 is purely a decaying function, which will broaden the lines in
just the same way as a decaying exponential does.
27
5.11
The peak due to TMS is likely to be a sharp line. Hence, the corresponding time-domain signal
decays slowly, and is therefore more likely to be truncated. The other lines in the spectrum will
usually be broader than TMS, so their time-domain signals decay more rapidly and are less likely to
be truncated.
Truncation artefacts (sinc wiggles) can be suppressed by applying a decaying weighting function.
This will decrease the resolution, and may reduce the SNR.
28
6
The quantum mechanics of one spin
6.1
Iz = 12
Z
? d
Z
? d
Z
d
? Q
Dirac notation:
Iz |i = 12 |i
Dirac notation:
h|i
Dirac notation:
h|i
Dirac notation:
h|Q|i
(a) h|i = 1
(b) h|i = 0 or h|i = 0
(c) Iz |i = 12 |i
(d) |i = c? |i + c? |i.
6.2
h|Iy |i
.
h|i
1 ? ?
1 ? ?
2 i c c h|i 2 i c c h|i
1 ? ?
1 ? ?
2 i c c 2 i c c .
+ 21 i c? c? h|i 21 i c? c? h|i
30
Iy |i = 12 i |i,
and to go to the last line, we have used the fact that |i and |i are orthonormal (Eq. 6.5 on page 108
and Eq. 6.6 on page 108).
hIy i can be interpreted as the average value of the y-component of angular momentum when
measured for a large number of spins, each of which has the same wavefunction |i.
6.3
=
=
=
h|I |i h|I |i
x
x
h|Ix |i h|Ix |i
1 h|i 1 h|i
2
2
1
1
2 h|i
2 h|i
0 1
2
.
1
0
2
Ix |i = 12 |i,
and to go to the last line we have used the fact that |i and |i are orthonormal (Eq. 6.5 on page 108
and Eq. 6.6 on page 108).
Similarly,
Iy
h|I |i
y
=
h|Iy |i
1 i h|i
= 2
1
2 i h|i
0 1 i
2
=
1
i
0
2
h|Iy |i
h|Iy |i
12 i h|i
12 i h|i
31
6.4
Starting with the expression for hIy i, and substituting in c? = r exp(i ) and c? = r exp(i ) we
find:
hIy i =
=
=
=
1 ? ?
2 i c c
21 i c? c?
h
i
1
2 i r r exp(i ) exp(i ) r r exp(i ) exp(i )
h
i
1
2 i r r exp i ( ) exp i ( )
h
i
1
2i r r exp i ( ) exp i ( ) ,
hI x i(1) + hI x i(2) + . . .
(2)
(1)
(2) (2)
(2)
r(1) r(1) sin((1)
) + r r sin( ) + . . .
Nr r sin( ).
At equilibrium, the phases are randomly distributed, and so sin( ) is randomly distributed
between 1. As a result, the equilibrium y-magnetization is zero.
6.5
Starting from Eq. 6.31 on page 120 and premultiplying by h|, we obtain:
dc? (t)
dc? (t)
|i +
|i =
dt
dt
dc? (t)
dc? (t)
h| |i + h|
|i =
dt
dt
12 i c? (t)|i + 21 i c? (t)|i
h
i
h
i
h| 12 i c? (t) |i + h| 12 i c? (t) |i.
The derivatives of c? and c? , and the quantities in square brackets, are numbers, so the above
expression can be rearranged to give
dc? (t)
dc? (t)
h|i +
h|i =
dt
dt
dc? (t)
=
dt
12 i c? (t)h|i + 12 i c? (t)h|i
?
1
2 i c (t).
To go to the last line, we have used the orthonormality property of |i and |i.
32
Substituting Eq. 6.58 on page 137 into the left-hand side of Eq. 6.57 on page 137 gives:
dc? (t)
dt
i
d h ?
c (0) exp 12 i t
dt
?
1
1
i
c
(0)
exp
i
t
2
2
?
1
2 i c (t).
6.6
hIy i = 12 i c? c? 12 i c? c? .
Substituting in the expressions for how c? and c? vary under free evolution (Eq. 6.34 on page 121)
gives:
h
i h
i
h
i h
i
hIy i(t) = 12 i c? (0) exp 12 i t c? (0) exp 12 i t 12 i c? (0) exp 12 i t c? (0) exp 12 i t
?
1 ?
(i t) 12 i c? (0)c? (0) exp (i t)
2 i c (0)c (0) exp
?
?
1 ?
1 ?
2 i c (0)c (0) [cos(t) i sin(t)] 2 i c (0)c (0) [cos(t) + i sin(t)]
i
h
i
h
cos(t) 12 i c? (0)c? (0) 12 i c? (0)c? (0) + sin(t) 21 c? (0)c? (0) + 12 c? (0)c? (0)
=
=
were used, and to go to the last line, the expressions for hI x i and hIy i in terms of c? and c? were used
(Eqs 6.12 and 6.13 on p. 111).
This result is summarized in the diagram below. The grey arrow shows the initial position, and the
black arrow shows the position after time t.
<Iy >
t
<Iy >(0)
<Ix >(0)
6.7
<Ix >
33
h||i
h||i
11 12
=
21 22
h||i
h||i
We can now calculate the 11 element (for clarity, the overbars indicating the ensemble averaging
have been omitted until the last line):
11
h||i
=
=
h|ih|i
h
ih
i
h| c? |i + c? |i c? h| + c? h| |i
h
ih
i
c? h|i + c? h|i c? h|i + c? h|i
c? c? .
To go to the second line, the definition of was inserted, and on the third line |i was expressed as
a superposition of |i and |i.
The other elements can be calculated in a similar way to give:
12 = c? c?
21 = c? c?
22 = c? c? .
Hence,
c? c?
=
c? c?
c? c?
.
c? c?
34
7
Product operators
7.1
exp(i Ix )Iy exp(i Ix ) represents a rotation of Iy about x through angle . From Fig. 7.4 on
page 148 (a) on p. 148, Iy is transformed into Iz . Hence,
Ix
Iy cos Iy + sin Iz .
This is consistent with the identity on line one of Table 7.1 on page 143.
exp(i Sy )Sz exp(i Sy ). From (b) of Fig. 7.4 on page 148, Sz is transformed into S x by a
rotation about y:
S
y
Sz cos Sz + sin S x .
exp(i Iz )(Iy ) exp(i Iz ). Fig. 7.4 on page 148 (c) shows the effect of a rotation about z on
Iy : the result is a transformation to Ix . Hence,
I
z
Iy cos Iy + sin Ix .
exp(i (/2)Iy )Ix exp(i (/2)Iy ). This represents the rotation of Ix about y through angle /2.
From Fig. 7.4 on page 148 (b), Ix is transformed to Iz . Hence,
(/2)I
y
Ix cos(/2) Ix sin(/2) Iz .
exp(i Iz )(Iz ) exp(i Iz ). Careful inspection of the arguments of the exponentials reveals that
this represents a z-rotation through angle i.e. the rotation is in a clockwise sense. In this
case, it does not matter as Iz is unaffected by a rotation about the z-axis:
Iz
Iz Iz .
36
7.2
The 90 (x) pulse rotates the equilibrium magnetization (represented by Iz ) onto the y-axis:
(/2)I
x
Iz cos(/2) Iz sin(/2) Iy
= Iy .
This transverse term evolves under the offset during the delay to give
I
z
Iy cos() Iy + sin() Ix ,
y
cos() Iy + sin() Ix cos() Iy + cos sin() Ix sin sin() Iz
= cos() Iy sin() Ix .
Now we consider the evolution during the second delay. Taking each term separately, we obtain
I
z
cos() Iy cos() cos() Iy + sin() cos() Ix ,
Iz
7.3
(/2)I
y
Iy Iy
(/2)I
y
Iy Iy
y
Sy Sy .
In all three cases, the pulse is applied about the same axis along which the magnetization is aligned,
therefore the magnetization is unaffected.
In the following cases, we refer to Fig. 7.4 on page 148 to determine how the operator is transformed
by the rotation.
I
y
Ix cos()Ix sin()Iz
= Ix .
37
The difference between the next two examples is the sense of the 90 rotation.
(/2)I
y
Iz cos(/2) Iz + sin(/2) Ix
= Ix .
(/2)I
y
Iz cos(/2) Iz + sin(/2) Ix
= Ix .
y
Sz cos Sz + sin S x
= Sz .
y
Iz cos() Iz + sin() Ix
= Iz .
7.4
The 90 (x) pulse rotates the equilibrium magnetization Iz to Iy . Free evolution is a rotation about
z, so the state of the system after the delay is
cos() Iy + sin() Ix .
The 90 (y) pulse does not affect the Iy term, but rotates Ix to Iz . The final result is
cos() Iy sin() Iz .
The pulse sequence has therefore produced transverse magnetization along y, whose amplitude
varies as cos(). This becomes zero if cos() = 0. Hence, there is a null at = /2, which
corresponds to an offset of = /(2) in rad s1 , or 1/(4) in Hz.
There is a maximum in the excitation when cos() = 1. This occurs at offsets satisfying = n
where n = 0, 1, 2, . . . i.e. = (n)/ or n/(2) in Hz.
38
7.5
Figure 7.6 (b) on p. 152 shows that, as a result of evolution of the scalar coupling, the in-phase
term I1y is partly transformed into the anti-phase term 2I1x I2z ; the angle of rotation is J12 . This
is represented as:
2J I I
12 1z 2z
I1y cos(J12 ) I1y + sin(J12 ) 2I1x I2z .
Using the same figure, we see that 2I1x I2z is partly transformed to I1y :
2J I I
12 1z 2z
2I1x I2z cos(J12 ) 2I1x I2z sin(J12 ) I1y .
Similarly,
2J (/2)I S
IS
z z
S x cos(JIS /2) S x + sin(JIS /2) 2Iz Sy .
2J I I
12 1z 2z
I2y cos(J12 ) I2y sin(J12 ) 2I1z I2x .
12 1z 2z
I2z I2z .
In the last example we see that z-magnetization is not affected by evolution under coupling simply
because the Hamiltonian for coupling only contains Iz operators.
7.6
The evolution is determined by the Hamiltonian given in Eq. 7.14 on page 150:
H two spins = 1 I1z + 2 I2z + 2J12 I1z I2z .
We will now work out the effect in turn of the three terms in the Hamiltonian. The first is a rotation
about z:
1 t I1z
I1y cos(1 t) I1y sin(1 t) I1x .
The second term, 2 I2z , does not need to be considered as spin-two operators have no effect on
spin-one operators. Finally, we consider the effect of evolution under scalar coupling:
2J t I I
12 1z 2z
cos(1 t) I1y sin(1 t) I1x
M x + iMy
cos(J12 t) sin(1 t) + i cos(J12 t) cos(1 t)
i cos(J12 t) [cos(1 t) + i sin(1 t)]
i cos(J12 t) exp(i 1 t)
1
2 i exp(i J12 t) + exp(i J12 t) exp(i 1 t)
1
(i[1
2 i exp
39
To go to the fourth line, we have used the identity cos + i sin exp(i ), and to go to the fifth line,
we have used cos 12 [exp(i ) + exp(i )]. Finally, to go to the sixth line we have multiplied out
the square brackets. Fourier transformation of this signal gives a positive line at 1 + J12 , and a
second positive line at 1 J12 i.e. an in-phase doublet on spin one. The factor of i corresponds to
a phase shift of 90 , so the imaginary part of the spectrum contains the absorption mode lineshape.
2J12
imaginary
real
1-J12
1+J12
A similar line of argument gives the observable signal arising from 2I1y I2z as
S (t) = 12 i exp (i[1 + J12 ]t) 12 i exp (i[1 J12 ]t) .
The corresponding spectrum is an anti-phase doublet on spin one. Again, the factor of i means that
the absorption mode lines will appear in the imaginary part of the spectrum.
2J12
imaginary
real
1-J12
1+J12
40
7.7
I1y represents in-phase magnetization on spin one, aligned along the y-axis. The resulting spectrum
will be an in-phase doublet centred on the offset of spin one, both peaks of which are in the
absorption mode.
I2x represents in-phase magnetization on spin two. However, it is aligned along the x-axis, so has a
phase of 3/2 relative to the y-axis. The spectrum therefore comprises an in-phase doublet that is
centred on the offset of spin two, with both peaks in the dispersion mode.
2I1y I2z represents magnetization on spin one that is anti-phase with respect to spin two, and aligned
along y. The spectrum is therefore an anti-phase doublet in the absorption mode.
2I1z I2x represents anti-phase magnetization on spin two. It is aligned along x, so the lineshape will be
dispersive. Therefore, the spectrum is an anti-phase spin-two doublet with the dispersion lineshape.
I1y
I2x
2I1yI2z
2I1zI2x
7.8
In-phase magnetization I1x is rotated in the xz-plane towards I1z by the application of the y-pulse
of duration tp .
t I
1 p 1y
I1x cos(1 tp ) I1x sin(1 tp ) I1z
A 180 pulse about y applied only to spin two changes the sign of the anti-phase magnetization on
spin one.
I
2y
2I1x I2z cos() 2I1x I2z + sin() 2I1x I2x
= 2I1x I2z
In-phase magnetization on spin one is allowed to evolve under coupling for time t, thus generating
anti-phase magnetization on the same spin.
2J t I I
12 1z 2z
I1x cos(J12 t) I1x sin(J12 t) 2I1y I2z
41
(/2)I2y
tS
I z
S z
S x S x cos(S t) S x + sin(S t) Sy
Anti-phase magnetization on spin two evolves under coupling to generate in-phase magnetization
on the same spin.
2J12 t I1z I2z
7.9
The Hamiltonian for free evolution is given by Eq. 7.14 on page 150:
H two spins = 1 I1z + 2 I2z + 2J12 I1z I2z .
The spin echo refocuses the evolution due to offset, so we only need to consider the evolution of
2I1x I2z under coupling, which gives
2J I I
12 1z 2z
2I1x I2z cos(J12 ) 2I1x I2z + sin(J12 ) I1y .
The pulse about the x-axis acts on both spins, leaving I1x unaffected, but inverting I2z and I1y :
(I1x +I2x )
cos(J12 ) 2I1x I2z + sin(J12 ) I1y cos(J12 ) 2I1x I2z sin(J12 ) I1y .
Finally, evolution under coupling during the second delay gives
2J12 I1z I2z
The effect of the y spin echo on spin-one and spin-two terms is shown in the table below:
42
final state
initial state
cos (2J12 )
sin (2J12 )
I1x
I1y
I1x
I1y
2I1y I2z
2I1x I2z
2I1x I2z
2I1y I2z
2I1x I2z
2I1y I2z
I1y
I1x
I2x
I2y
I2x
I2y
2I1z I2y
2I1z I2x
2I1z I2x
2I1z I2y
2I1z I2x
2I1z I2y
I2y
I2x
The results for the in- and anti-phase operators on spin two can be obtained from those for spin
one simply by swapping the labels 1 and 2.
Likewise for the x spin echo:
final state
initial state
cos (2J12 )
sin (2J12 )
I2x
I2y
I2x
I2y
I1z I2y
2I1z I2x
2I1z I2x
2I1z I2y
2I1z I2x
2I1z I2y
I2y
I2x
7.10
For complete transformation to 2I1z I2x , we need sin(2J12 ) = 1 and cos(2J12 ) = 0. These occur
when 2J12 = /2, i.e. = 1/(4J12 ).
x
I1x cos(2J12 )I1x + sin(2J12 )2I1y I2z .
43
7.11
The 180 (x) pulse is applied to only the S spin, so the evolution of the offset of the S spin will be
refocused. We need to consider the evolution of the coupling. Starting with S x , the state of the
system after the first delay is
cos(J12 ) S x + sin(J12 ) 2Iz Sy .
The 180 (x) pulse is applied only to the S spin, and so does not affect Iz or S x . However, the term in
Sy changes sign to give:
cos(J12 ) S x sin(J12 ) 2Iz Sy .
Evolution of the coupling during the second delay gives
h
i
cos2 (J12 ) + sin2 (J12 ) S x + [sin(J12 ) cos(J12 ) cos(J12 ) sin(J12 )] 2Iz Sy = S x ,
where the anti-phase terms cancel, and the identity cos2 + sin2 1 has been used. The evolution
of the coupling has therefore been refocused.
Repeating the calculation for the anti-phase term, we see that 2Iz S x is unaffected by the spin echo
sequence. Again, the coupling is refocused.
Both operators are unchanged, which is the same effect that a 180 (x) pulse to the S spin would
have:
S x
S x S x
S x
2Iz S x 2Iz S x .
Likewise, the operators Ix and 2Ix Sz will have their evolution under coupling refocused. However,
as the 180 (x) pulse is not applied to the I spin, the offset will not be refocused, but will evolve for
the duration of the spin echo (time 2).
7.12
The pulse sequence for the INEPT experiment is reproduced below from Fig. 7.15 on page 168:
y
1
I
S
A
44
At the end of period A it was shown in section 7.10.2 on page 168 that the state of the spin system
is
kI cos(2JIS 1 ) Iy kI sin(2JIS 1 ) Ix Sz .
The purpose of the two 90 pulses in period B is to transfer the anti-phase magnetization (the
second term) from the I spin to the S spin. This requires the pulse acting on the I spin to cause the
transformation Ix Iz , which requires a rotation about the y-axis.
If the initial 90 pulse is about the x-axis, it rotates the equilibrium kI Iz to kI Iy . At the end of the
spin echo in period A, the system is in the following state:
kI cos(2JIS 1 ) Iy + kI sin(2JIS 1 ) 2Ix Sz .
As before, the Iy term is not affected by the 90 (y) pulse on the I spin, and can be discarded. The
two pulses affect the ant-phase term as follows:
(/2)Iy
(/2)S x
7.13
I1x + i I1y
I1x i I1y ,
1
2
I1+ + I1 .
45
1
2i
I2+ I2 .
1
2i I1z
I2+ I2 ,
which is an equal mixture of coherence orders +1 and 1, found by summing the coherence
orders of spins one and two (spin one has coherence order zero).
Since both I1z and I2z have coherence order zero, so does 2I1z I2z .
2I1+ I2 has coherence order zero since the coherence order of spin one is +1 and that of spin
two is 1.
2I1x I2y can be written as:
2I1x I2y
2 21 I1+ + I1 2i1 I2+ I2
1
2i I1+ I2+ I1 I2 I1+ I2 + I1 I2+ .
2I1x I2y is therefore an equal mixture of coherence orders +2 and 2, double-quantum coherence, and coherence order 0, zero-quantum coherence.
7.14
Using the definitions of Ii given by Eq. 7.28 on page 174, we can write 2I1x I2y as:
2I1x I2y 2 12 I1+ + I1 2i1 I2+ I2
2i1 I1+ I2+ I1 I2 + 2i1 I1 I2+ I1+ I2 .
|
{z
} |
{z
}
double-quantum part
zero-quantum part
The other relationships in the table can be verified in the same way.
7.15
The first 90 (x) pulse rotates the equilibrium I1z to I1y . During the spin echo sequence, the offset is
refocused, but the coupling evolves throughout. The state of the spin system at the end of the spin
echo is
cos(2J12 ) I1y sin(2J12 ) 2I1x I2z .
The final pulse acts to give
cos(2J12 ) I1z + sin(2J12 ) 2I1x I2y .
and ZQ
given in the last table of section 7.12.1 on page 174, we see
Using the definitions of DQ
y
y
that we can rewrite the second term as
1
46
The amplitude of this multiple quantum term is a maximum when sin(2J12 ) = 1, which occurs
when = 1/(4J12 ).
Starting with equilibrium magnetization on spin two, I2z , the terms present after the final pulse are
cos(2J12 ) I2z + sin(2J12 ) 2I1y I2x ;
we have taken the terms from the previous calculation and swapped the labels 1 and 2. Again, from
and ZQ
in section 7.12.1 on page 174, we can write the multiple quantum
the definitions of DQ
y
y
term as
1
7.16
is equal to 2I1x I2x + 2I1y I2y . Zero-quantum coherence between spins
From the table on p. 176, ZQ
x
one and two does not evolve under the coupling between these two spins, so we need only consider
the evolution under offset. Considering first the 2I1x I2x term:
h
ih
i
1 t I1z +2 t I2z
2I1x I2x 2 cos(1 t) I1x + sin(1 t) I1y cos(2 t) I2x + sin(2 t) I2y .
We will now look at the 2I1y I2y term;
h
ih
i
1 t I1z +2 t I2z
2I1y I2y 2 cos(1 t) I1y sin(1 t)I1x cos(2 t) I2y sin(2 t) I2x .
Collecting these terms together, we obtain:
[cos(1 t) cos(2 t) + sin(1 t) sin(2 t)] (2I1x I2x + 2I1y I2y )
+ [sin(1 t) cos(2 t) cos(1 t) sin(2 t)] (2I1y I2x 2I1x I2y ).
Using the identities:
cos(A B) =
sin(A B) =
and ZQ
:
and the definitions of ZQ
x
y
x (2I1x I2x + 2I1y I2y )
ZQ
we obtain
+ sin ([1 2 ]t) ZQ
.
cos ([1 2 ]t) ZQ
x
y
8
Two-dimensional NMR
8.1
In each example, the preparation period is highlighted with a grey box, and the mixing period with
a grey box with a dashed border.
COSY
t1
DQF COSY
t1
t2
t2
DQ spectroscopy
t1
TOCSY
mix
t1
t2
t2
HSQC
y
1
t2
I
t1
HMQC
HMBC
t2
I
I
S
t2
t1
t1
HETCOR
t1
I
t2
S
48
8.2
2
t1
4
5
6
3
1
4
2
5
3
6
t1
1, 2 and 3 are cross-sections of the damped cosine wave, whose amplitude provides the modulation
in t1 . The period is the same for each wave, and the amplitude increases as we approach the centre
of the peak in 2 .
4, 5 and 6 are cross-sections through the 2 dimension. The amplitude and sign of the peak is
modulated by a damped cosine wave in t1 .
8.3
t2
Starting with equilibrium magnetization on spin two, the state of the system at t2 = 0 can be
determined from terms [1][4] on p. 191 by swapping the spin labels 1 and 2. The result is:
cos (J12 t1 ) cos (2 t1 ) I2z
sin (J12 t1 ) cos (2 t1 ) 2I1y I2x
[1]
[2]
49
It was shown in section 7.5.2 on page 154 that the evolution of 2I1y I2z during t2 gives rise to the
following time domain signal:
1
2 i exp(i[1
Imposing an exponential decay on this signal and Fourier transforming, we obtain the following
spectrum
1
1
2 i [A2 (1 + J12 ) + iD2 (1 + J12 )] 2 i [A2 (1 J12 ) + iD2 (1 J12 )] .
To ensure that the absorption mode lineshape appears in the real part of the spectrum, we multiply
the expression above by a 90 phase correction factor i.e. by exp(i /2). Noting that exp(i /2)
i, we obtain:
1
2
1
2
gives
1
2
Imposing an exponential decay and taking the cosine Fourier transform yields the spectrum
1
2
Imposing an exponential decay to this, and Fourier transforming gives the spectrum
1
2
1
2
1
2
Assuming an exponential decay and applying a sine Fourier transform gives the spectrum:
1
2
50
Multiplying together the 1 and 2 parts of the spectrum and taking the real part yields the following
four components of the diagonal-peak multiplet. Note that they all have the same sign.
+ 14 A1 (2 + J12 )A2 (2 + J12 ) + 14 A1 (2 + J12 )A2 (2 J12 )
+ 41 A1 (2 J12 )A2 (2 + J12 ) + 14 A1 (2 J12 )A2 (2 J12 ).
8.4
The DQF COSY pulse sequence is given in Fig. 8.15 on page 200.
t1
t2
Starting with equilibrium magnetization on spin two, I2z , the state of the spin system after the second
pulse is exactly the same as for the COSY experiment at t2 = 0 as calculated in Exercise 8.3. Of the
four terms present, the only one that contains double-quantum coherence is [2]:
sin (J12 t1 ) cos (2 t1 ) 2I1y I2x .
In section 7.12.1 on page 174, it was shown that 2I1y I2x is a mixture of double- and zero-quantum
, and the zero-quantum operator ZQ
, are defined
coherence. The double-quantum operator DQ
y
y
as:
2I1x I2y + 2I1y I2x
2I1y I2x 2I1x I2y .
DQ
ZQ
y
y
Hence,
2I1y I2x =
1
2
+ ZQ
.
DQ
y
y
8.5
51
t1
t2
The first 90 pulse rotates equilibrium I1z to I1y , which then evolves under coupling during the spin
echo (the offset is refocused) to give
cos(2J12 ) I1y sin(2J12 ) 2I1x I2z .
This is rotated by the second 90 pulse to give
cos(2J12 ) I1z + sin(2J12 ) 2I1x I2y .
We select just zero-quantum coherence at this point. From the table on p. 176, the zero-quantum
, so at the start of t1 we have:
part of 2I1x I2y is 12 ZQ
y
.
12 sin(2J12 ) ZQ
y
This evolves during t1 according to the rules in section 7.12.3 on page 176:
1 t1 I1z +2 t1 I2z
12 sin(2J12 ) ZQ
21 cos ([1 2 ]t1 ) sin(2J12 ) ZQ
y
y
1
where
2I1x I2x + 2I1y I2y
ZQ
x
Note that the zero-quantum coherence between spins one and two does not evolve due to the
coupling between these two spins.
The final pulse rotates the zero-quantum terms to give
21 sin(2J12 ) cos ([1 2 ]t1 ) 2I1z I2x 2I1x I2z
+ 21 sin(2J12 ) sin ([1 2 ]t1 ) 2I1x I2x + 2I1z I2z ,
the observable terms of which are:
1
2
sin(2J12 ) cos ([1 2 ]t1 ) 2I1x I2z 2I1z I2x .
The spectrum has the same form as the double-quantum spectrum shown in Fig. 8.19 on page 205
with the following differences:
In 2 the anti-phase doublet on spin two, which arises from the 2I1z I2x term, appears with the
opposite sign.
The frequency of the peaks in 1 is (1 2 ) i.e. the zero-quantum frequency.
The information that can be gained from this spectrum is the same as for the double-quantum
spectrum.
8.6
From section 8.7 on page 209, the terms present after the first spin echo are
cos(2JIS 1 )Iy sin(2JIS 1 )2Ix Sz .
52
The subsequent 90 pulses are required to transfer the anti-phase magnetization (the second term)
to the S spin, so that it can evolve under the offset of the S spin during t1 . This requires the I spin
pulse to rotate Ix to Iz , which is only possible if the pulse is about y.
Applying the I spin pulse about y gives:
(/2)I
(/2)S
y
x
sin(2JIS 1 ) 2Ix Sz sin(2JIS 1 ) 2Iz Sz sin(2JIS 1 ) 2Iz Sy .
The 2Iz Sy term, present at the start of t1 , simply changes sign when the I spin pulse is changed in
phase from +y to y.
8.7
t2
I
y
t1
S
A
The state of the spin system after the spin echo (A) is, from section 8.7 on page 209:
cos(2JIS 1 ) Iy sin(2JIS 1 ) 2Ix Sz .
The pulses during period B have the following effect on the anti-phase term:
(/2)(Iy +Sy )
8.8
The pulse sequence is given in Fig. 8.24 on page 213 (a) on p. 213. We will now modify it so that
the first 90 S spin pulse is about x.
53
F
t2
-x
t1
S
A
As argued in section 8.8 on page 212, the offset of the I spin is refocused over the whole of period
F. The first pulse creates Iy , which evolves during period A under coupling to give
cos(JIS ) Iy + sin(JIS ) 2Ix Sz .
Taking just the second term (the first does not produce any useful peaks), and applying to it the first
S spin pulse (with phase x) gives:
sin(JIS ) 2Ix Sy ,
which is of opposite sign to the corresponding term in section 8.8 on page 212. This sign change
propagates throughout the rest of the calculation so that the observable term
sin2 (JIS ) cos(S t1 )Iy ,
also has the opposite sign. The same result is produced on changing the phase of the second 90 S
spin pulse to x.
I spins that are not coupled to S spins do not give rise to anti-phase magnetization, and so are not
affected by the S spin pulses. This I spin magnetization is therefore unaffected by altering the phase
of the first S spin pulse. So, recording two spectra, the first with the first S spin pulse about x, and
the second with it about x, and then subtracting one from the other will retain the wanted signal
and eliminate the unwanted signal.
8.9
It was shown in section 8.8 on page 212 that the observable term at the start of acquisition is
sin2 (JIS ) cos(S t1 ) Iy .
The amplitude of the signal is given by sin2 (JIS ), which has a maximum value of 1. This occurs
when the argument of the sine is an odd multiple of /2 i.e. when JIS = n/2, n = 1, 3, 5, . . .
Hence, = n/(2JIS ), n = 1, 3, 5, . . .
sin2 (JIS ) = 0 when JIS = n/2, n = 0, 2, 4, . . . i.e. is an even multiple of /2. Hence the
amplitude will be zero when = n/(2JIS ), n = 0, 2, 4, . . .
8.10
The HSQC pulse sequence, without decoupling during acquisition, is shown in Fig. 8.22 on
page 210 (b) on p. 210.
y
1
t2
I
t1
S
A
54
55
8.11
Applying a 90 phase correction and taking the real part, we obtain an in-phase doublet on spin
one:
1
1
2 A2 (1 + J12 ) + 2 A2 (1 J12 ).
The modulation with respect to t1 is A11 cos(JIS t1 ) cos(1 t1 ), which can be expanded using the
identity
cos A cos B 12 [cos(A + B) + cos(A B)] ,
to give
1
2 A11
Imposing an exponential decay, and then taking the cosine Fourier transform gives:
1
2 A11
8.12
imaginary
56
8.13
57
8.14
cos ([1 + 2 ]t1 ) cos (/2) + sin ([1 + 2 ]t1 ) sin (/2)
sin ([1 + 2 ]t1 ),
where we have used cos (/2) = 0 and sin (/2) = 1. So, shifting the phase by /4 alters the
modulation from cosine to sine. Thus, to implement TPPI, each time we increment t1 the phases of
the pulses preceding t1 are incremented by 45 .
58
9
Relaxation and the NOE
9.1
The equilibrium populations of the and levels are given by Eq. 9.6 on page 259:
n0 = 21 N exp(E /kB T )
n0 = 12 N exp(E /kB T ),
where
E = 12 ~B0
E = + 21 ~B0 .
+1.326 1025 J.
1
2
5.00016 1012 ,
1
2
4.99984 1012 .
On account of the very small energy gap, these populations are very similar, although as expected
n0 > n0 .
The energy of the system is given by
E
= n E + n E
= 21 ~B0 n n .
4.243 1017 J.
60
9.2
The reduced spectral density function is given by Eq. 9.4 on page 257
j() =
2c
.
1 + 2 2c
For a fixed frequency , the maximum value of j() occurs at a value of c given by
d j()
= 0.
dc
Using the product rule, we obtain:
d
j() =
dc
=
42 2c
2
2
1 + 2 2c
1 + 2 2c
2 + 22 2c 42 2c
2
1 + 2 2c
2 1 2 2c
2 .
1 + 2 2c
The denominator is always non-zero, so the above expression can be solved by setting the numerator
to zero:
2 1 2 2c = 0
c
Since the rate constant for longitudinal relaxation depends on j(0 ), the above result indicates that
this rate constant has its maximum value when c = 1/0 .
61
9.3
At equilibrium, the lower state () must have a greater population than the upper state (), as
predicted by the Boltzmann distribution (assuming that the gyromagnetic ratio is positive). Suppose
we start with equal populations of the and states. The only way in which the population of
the state can increase relative to that of the state is for the rate of transitions from to to
exceed the rate from to . As the populations are equal, this implies that the rate constant for the
transition from to must be greater than that for the transition from to .
9.4
ln[(S() + S(0))/2S(0)]
0.0
0
0.0
129.7
0.000
0.5
0.1
93.4
0.151
1.0
0.5
7.6
0.754
1.5
0.9
62.6
1.353
1.3
93.4
1.968
/s
2.0
2.5
1.7
109.5
2.554
2.1
118.9
3.179
2.9
126.4
4.370
3.0
-1
-2
-3
-4
-5
9.5
In section 9.5.2 on page 266, it was shown that an estimate for T 1 is given by null / ln 2. The values
of T 1 are therefore:
62
null / s
T1 / s
0.5
0.72
0.6
0.87
0.8
1.15
The fact that the solvent was still inverted after a delay of 1.5 s shows that it has a T 1 value that is
greater than 1.5/ ln 2 = 2.16 s i.e. the solvent relaxes at a slower rate than the other spins.
9.6
Mz()/Mz0
The peak height S () is proportional to the z-magnetization present just before the 90 pulse. Thus,
S () can be written as
S () = c 1 exp(Rz ) .
Letting , S = c; this will be the height of the peak in a simple 90 acquire experiment.
Substituting this into the above equation gives
S () = S 1 exp(Rz ) .
Rearranging this yields:
S ()
S ()
S
S S ()
S
!
S S ()
ln
S
S 1 exp(Rz )
1 exp(Rz )
exp(Rz )
Rz ,
where we have taken the natural logarithm to go to the last line. Hence, a plot of ln[(S S ())/S ]
against gives a straight line of gradient Rz .
63
9.7
Assuming that the rate is proportional to the deviation from the equilibrium population, we can
write the rate of change of the population of level 1 (using the labelling in Fig. 9.17 on page 268) as
dn1
= W1(2,) n1 n01 W1(1,) n1 n01 W2 n1 n01
dt
|
{z
}
loss from level 1
+W1(2,) n2 n02 +W1(1,) n3 n03 +W2 n4 n04 .
{z
}|
{z
}
|
{z
}|
gain from level 3
Similarly, the rates of change of the populations of the other levels are:
dn2
= W1(2,) n2 n02 W0 n2 n02 W1(1,) n2 n02
dt
|
{z
}
loss from level 2
+W1(2,) n1 n01 +W0 n3 n03 +W1(1,) n4 n04 .
{z
}
{z
}|
|
{z
}|
gain from level 4
dn3
= W1(1,) n3 n03 W0 n3 n03 W1(2,) n3 n03
dt
|
{z
}
loss from level 3
n1
+W0 n2 n02 +W1(2,) n4 n04 .
{z
}
{z
}|
{z
}|
+W1(1,)
|
n01
(1,)
n4 n04 W1(2,) n4 n04
{z
}
+W2 n1
|
{z
}|
n01
dn4
= W2 n4 n04 W1
dt
|
n3 n03 .
{z
}
}|
{z
9.8
2
0 H
~
4r3
3 2
40 b j(0,1 )
3 2
10 b j(0,1
+ 0,2 )
W1(2) =
W0 =
3 2
40 b j(0,2 )
1 2
20 b j(0,1 0,2 ).
64
In the fast motion limit, j() = 2c for all frequencies , so the rate constants have the
following numerical values:
3 2
20 b c
3 2
W1(2) = 20
b c
3 2
W2 = 5 b c
W1(1) =
W0 =
=
=
1 2
10 b c
3
10
12
= 0.0503 s1
20 1.675 10 20 10
3
10
12
= 0.0503 s1
20 1.675 10 20 10
3
10
12
= 0.201 s1 ,
5 1.675 10 20 10
1
10
12
= 0.0335 s1
10 1.675 10 20 10
,
,
.
R(2)
z
12
(c) Substituting j() = 2c for all values of in Eq. 9.20 on page 272, we obtain:
h
i
3
3
1
R(1)
= b2 20
j(0,1 ) + 10
j(0,1 + 0,2 ) + 20
j(0,1 0,2 )
z
=
b2 c
0.335 s1 .
1
Similarly, R(2)
, and 12 = 0.168 s1 .
z = 0.335 s
b2 c
1
To go to the second line, we set j() = 2c . Similarly, R(2)
.
xy = 0.335 s
(e) As expected in the fast motion limit, the rate constants for the self-relaxation of both
longitudinal and transverse magnetization have the same value. The rate constant for the
cross-relaxation of longitudinal magnetization has half the value of the self-relaxation rate
constant and is positive, again as expected.
(f) The Larmor frequency is:
0 = 2 500 106 = 3.140 109 rad s1 .
From the expression for the reduced spectral density,
j() =
2c
,
1 + 2 2c
2 500 1012
2c
=
= 2.88 1010 s,
1 + (3.140 109 500 1012 )2
1 + 20 2c
9.20 1011 s,
1.00 109 s.
65
(2)
The values of R(1)
and 12 can be calculated by substituting 0,1 = 0,2 = 0 into
z , Rz
Eq. 9.20 on page 272, giving R(1)
= R(2)
= 2.025 s1 , and 12 = 0.375 s1 . Similarly,
z
z
(1)
(2)
from section 9.8.5 on page 296, R xy = R xy = 3.41 s1 .
(g) As 0 c = 1.6, we are now outside the fast motion limit, and beyond the zero-crossing point
where 12 = 0. As a result, 12 is negative and the rate constant for transverse relaxation
exceeds that for longitudinal relaxation. We are not very far beyond 0 c = 1, so the rate of
longitudinal relaxation is significantly faster than for c = 20 ps.
9.9
0 C H ~
4r3
=
=
Hence, b = 2.035 10 s2 .
In the fast motion limit (c = 20 ps), the values of the rate constants can be calculated from those
in the previous question by multiplying by the ratio of the b2 values. Note that we can only do this
because j() is independent of c in this limit. So,
2
bCH (1) 1 1
13
1
2 Rz
R(1)
C
H
=
H H
z
bHH
2
10
=
=
2.035 1010
0.335
1.675 1010
0.407 s1 .
(2)
1
1
Similarly, R(2)
, 12 = 0.204 s1 , and R(1)
. All these values are greater
z = 0.407 s
xy = R xy = 0.407 s
1
1
13
than for the H H pair due to the smaller separation between the C and 1 H. C is a quarter the
value of H , so for the same distance we would expect the relaxation to be sixteen times slower.
However, the rate constant goes as 1/r6 , which changes by a factor of 19.2 on going from r = 1.8
to r = 1.1 .
9.10
The necessary equations are given in section 9.10.2 on page 305. At B0 = 4.7 T, c2 is given by:
c2 = B0 k 2
h
i2
= 6.728 107 4.7 100 106
=
1.00 109 s2 ,
where we have used the gyromagnetic ratio of 13 C. In the fast motion limit, j() = 2c for all values
of , so the rate constants are:
Rz
1
c2 15
j(0 )
2
c2 15
c
1.00 109
0.00267 s1 ,
2
15
20 1012
R xy
66
c2
2
45 j(0)
7
c2 45
c
1
30
j(0 )
= 1.00 109
=
7
45
20 1012
0.00311 s1 .
Rz
R xy
11.742
1.00 109 = 6.24 109 s2 ,
4.72
11.742
0.00267 = 0.0167 s1 ,
4.72
11.742
0.00311 = 0.0194 s1 .
4.72
The values of the CSA relaxation rate constants at B0 = 11.74 T are an order of magnitude smaller
than those for dipolar relaxation of 13 C due to an attached 1 H. However, as the CSA contribution
goes as B20 it will become more significant at higher fields.
9.11
1.581 108 s2 .
Hence,
Rz
R xy
1
j(0 )
c2 15
2
c2 15
c
1.581 108
0.00042 s1 ,
c2
1
30
2
15
20 1012
i
j(0 )
2
45 j(0)
7
c
c2 45
1.581 108
0.00049 s1 .
7
45
20 1012
67
9.12
We are going to apply the initial rate limit, in which we assume that, on the right hand side of
Eq. 9.21 on page 274,
dI1z
0
0
= R(1)
I1z I1z
12 I2z I2z
,
z
dt
I1z and I2z have their initial values:
!
dI1z
0
0
= R(1)
I1z (0) I1z
12 I2z (0) I2z
z
dt init
0
0
0
= R(1)
I1z
I1z
12 0 I2z
z
=
0
12 I2z
.
dI1z (t) =
I1z (t) =
0
12 I2z
dt
0
12 I2z
t + const.
0
0
We know that at time t = 0, I1z (0) = I1z
, so the constant of integration is I1z
. At t = :
0
0
I1z () = 12 I2z
+ I1z
.
Now we will look at the z-magnetization on spin two in the initial rate limit. Starting from
dI2z
0
0
= R(2)
I2z I2z
12 I1z I1z
,
z
dt
we obtain:
dI2z
dt
!
=
0
0
R(2)
I2z (0) I2z
12 I1z (0) I1z
z
0
0
0
12 I1z
I1z
0 I2z
R(2)
z
0
R(2)
z I2z .
=
init
The height of the peak due to spin one is proportional to I1z , and the height of that due to spin two
0
0
is proportional to I2z . Furthermore, both spins are of the same type, so I1z
= I2z
. The peak heights
for the irradiated, reference and difference spectra are:
spectrum
S 1 ()
S 2 ()
irradiated: (a)
c (12 + 1)
cR(2)
z
reference: (b)
c 12
c
c
R(2)
z
1
68
(a)
(b)
9.13
The NOE difference spectrum is convenient as it only shows the target resonance, and the resonances
which are receiving an NOE enhancement.
9.14
(a) The observation that the NOE enhancement depends only upon the cross-relaxation rate
constant is a property of the initial rate limit i.e. the assumption that the target peak is still
fully inverted after the delay . We are effectively ignoring self relaxation during this delay.
(b) At longer times, the inverted spin begins to relax back to equilibrium. This reduces the zmagnetization on that spin and so slows the growth of the NOE: hence the dependence on the
self-relaxation rate constant of that spin. The spin receiving the enhancement can also relax,
resulting in the NOE enhancement being lost: hence the dependence on its self relaxation rate
constant.
(c) Spin one is held saturated throughout the experiment, so its relaxation is of no importance.
Cross relaxation gives the rate of transfer of magnetization from spin one to spin two, while
self relaxation of spin two leads to a loss of this transferred magnetization. Therefore, there
is competition between these two processes, which is reflected in the observation that the
enhancement depends upon the ratio of the rate constants for cross and self relaxation.
69
9.15
In the initial rate limit, the enhancement in a transient NOE experiment depends only upon the
cross-relaxation rate constant for the transfer of magnetization between the inverted spin and the
spin receiving the enhancement. In this example, AB and BC will be approximately equal, so when
HB is inverted, the enhancement of HA and HC will be the same.
On inverting HA , the enhancement at HB still depends only on AB , so will be the same as for HA
and HC when HB is irradiated. HC is too far from HA to receive an enhancement.
In a steady state experiment, the enhancement depends upon the ratio of the cross-relaxation rate
C
constant to the self-relaxation rate constant of the spin receiving the enhancement. RA
z and Rz are
equal to each other, so saturation of HB will give equal enhancements on HA and HC .
Irradiation of HA gives a smaller enhancement on HB as the self relaxation of this spin is faster than
for HA or HC . This is because HB has two nearby protons which relax it, whereas HA and HC only
have one nearby proton.
70
9.16
t2
We will start with equilibrium magnetization on spin one, and assume that spins one and two are
not coupled. If the phase of the first 90 pulse is x, it rotates equilibrium I1z to I1y . This evolves
under the offset during t1 to give:
t I + t I
1 1 1z
2 1 2z
I1y cos(1 t1 )I1y sin(1 t1 )I1x .
There are also similar terms due to spin two. We select only longitudinal terms after this pulse, so
at = 0, the z-magnetization on each spin is:
0
0
I1z = cos(1 t1 ) I1z
and I2z = cos(2 t1 ) I2z
.
Rz I1z (t) Iz0 I2z (t) Iz0
I1z (t) Iz0 Rz I2z (t) Iz0 ,
0
0
where we have assumed that I1z
= I2z
= Iz0 . Using the initial rate approximation with the following
initial conditions:
I1z (0) = cos(1 t1 ) Iz0 and I2z (0) = cos(2 t1 ) Iz0 ,
we obtain:
!
dI1z (t)
dt init
!
dI2z (t)
dt init
Integrating these, and using the initial conditions to determine the values of the constants of
integration, we obtain:
I1z ()
Iz0
I2z ()
Iz0
cross peak
axial peak
cross peak
axial peak
Comparing these with Eq. 9.28 on page 282 and Eq. 9.29 on page 282, we see that the terms which
give the diagonal and cross peaks have changed sign, while the axial peak terms have not. The axial
peaks can therefore be suppressed by difference spectroscopy: we record two spectra with the phase
71
of the first pulse set to +x and x in turn, then we subtract one spectrum from the other. The cross
and diagonal peaks reinforce, and the axial peaks cancel.
9.17
22 c B2loc
B2loc
1
2T 1 2 c
1
2 1 (2.675 108 )2 10 1012
6.99 107 T2 .
This corresponds to a root mean square field of 8.4 104 T, which is 104 times smaller than B0 .
The local fields are indeed very weak.
9.18
Any effects of inhomogeneous broadening are refocused by the spin echo, so the amplitude of the
transverse magnetization present at the start of acquisition depends only upon R xy and the time 2.
The peak height is therefore given by:
S () =
S ()
=
S0
S 0 exp(2R xy )
exp(2R xy ).
/s
S ()
ln(S ()/S 0 )
0.0
0.0
0
65
0
0.1
39.4
0.501
0.1
72
0.2
23.9
1.001
0.2
0.3
14.5
1.500
0.3
0.4
8.8
2.000
0.4
/s
0.5
-0.5
ln[S()/S(0)]
-1.0
-1.5
-2.0
-2.5
-3.0
-3.5
-4.0
0.5
5.34
2.499
0.6
0.6
3.24
2.999
0.7
0.7
1.96
3.501
10
Advanced topics in two-dimensional NMR
10.1
J12 = 2 Hz
(a)
spin 3
spin 1
J23 = 6 Hz
J12 = 6 Hz
(b)
J23
J12
spin 3
spin 1
J23 = 6 Hz
/
/
J23
J12
I2y
2I1zI2y
2I2yI3z
4I1zI2yI3z
-10
-5
0
2/2
10
-10
-5
10 Hz
2/2
(a) Assuming that the offset of spin two is 0 Hz, the line positions are 4, 2, 2 and 4 Hz.
(b) Assuming that the offset of spin two is 0 Hz, the line positions are 6, 0, 0 and 6 Hz; we have
a doublet of doublets, with the central two lines falling on top of one another, giving a triplet.
74
10.2
We do not need to consider the 13 coupling as this does not affect the evolution of a spin-two
operator. First, let us consider the evolution due to the 12 coupling:
2J t I I
12 1z 2z
I2y cos (J12 t) I2y sin (J12 t) 2I1z I2x .
We will now consider the effect of the 23 coupling separately on each of the terms on the right.
For the term in I2y the evolution is straightforward:
2J t I I
23 2z 3z
cos (J12 t) I2y cos (J23 t) cos (J12 t) I2y sin (J23 t) cos (J12 t) 2I2x I3z .
For the sin (J12 t) 2I1z I2x term, the factor sin (J12 t) 2I1z is unaffected by the evolution of the 23
coupling: writing this factor as A we have
2J23 t I2z I3z
term
dependence dependence
axis
on J23
on J12
I2y
cos (J12 t)
cos (J23 t)
2I1z I2x
sin (J12 t)
cos (J23 t)
2I2x I3z
cos (J12 t)
sin (J23 t)
sin (J12 t)
sin (J23 t)
description
in-phase
As expected, going anti-phase with respect to the coupling between spins i and j introduces a factor
sin (Ji j t), whereas remaining in-phase with respect to this coupling introduces a factor cos (Ji j t).
The in-phase term is along y, singly anti-phase terms are along x, and the doubly anti-phase term
is along y i.e. they follow around in the usual sequence x y x y.
The corresponding tree diagram is
I2y
J12
I2y
I2y
-2I1zI2x
J23
J23
-2I2xI3z -2I1zI2x -4I1zI2yI3z
75
10.3
The trick to getting the signs right is just to think about the usual way in which y evolves into x
and then into y:
2I2yI3z
J23
2I2yI3z
-I2x
J12
J12
2I2yI3z -4I1zI2xI3z
-I2x
-2I1zI2y
The term 4I1z I2x I3z arises from splitting first to the left, giving the coefficient cos (J23 t), and second
to the right, giving the coefficient sin (J12 t). Note also that there is a minus sign introduced.
So the overall factor multiplying 4I1z I2x I3z is cos (J23 t) sin (J12 t).
10.4
Term [1] is
cos (J13 t1 ) cos (J12 t1 ) sin (1 t1 ) I1x .
First, let us consider the modulation in t1 . We use the identity
sin A cos B
1
2
(10.1)
Now we combine the two terms cos (J13 t1 ) sin (1 t1 + J12 t1 ) to give
1
2
Doing the same for the two terms cos (J13 t1 ) sin (1 t1 J12 t1 ) gives
1
2
76
two-dimensional multiplet consisting of sixteen lines, all with the same sign; this is in contrast to
the cross-peak multiplet, which consists of four anti-phase square arrays.
Note, too, that the magnetization which gives rise to the diagonal peak is along x in t2 and is sine
modulated in t1 . This is the complete opposite of the cross peak, which is along y in t2 and cosine
modulated. Thus, as in the COSY of the two-spin system, the diagonal and cross peaks are 90 out
of phase with one another in both dimensions.
The reason why the splittings due to J12 and J13 are in-phase in the 1 dimension is that the
modulation with respect to these couplings takes the form of a cosine: cos (Ji j t1 ).
10.5
(a)
(b)
(c)
(d)
(e)
(f)
77
78
(b)
(a)
2
(c)
(d)
1
2
In each case, the region plotted is 10 Hz from the centre of the cross-peak multiplet; for clarity,
only one anti-phase square array is shown. The linewidth is 0.5 Hz in each dimension.
79
10.6
(a)
(b)
(c)
(d)
(e)
(f)
1
2
In each case 10 Hz is plotted from the centre of the cross-peak multiplet. Note that in (c), where
J12 = J23 , the column of peaks down the centre of the cross peak no longer cancel one another out,
as four of the peaks are missing from the reduced multiplet.
In the series (a) to (c), J23 is increasing, thus increasing the 2 separation of the two anti-phase
square arrays. In the series (d) to (f), J13 is decreasing, thus decreasing the 1 separation of the two
anti-phase square arrays.
10.7
It is not usually possible to measure a value for the active coupling constant since this appears as an
anti-phase splitting. If the positive and negative peaks overlap significantly, the separation between
the maxima and minima of the anti-phase peaks is no longer equal to the value of the active coupling
constant.
See section 10.3.3 on page 334 for a description of how, under some circumstances, the values of
passive couplings may be determined from reduced multiplets.
80
10.8
10.9
I1+ I2 I3 + 41 2 I1 I2 I3 .
(10.2)
81
For this term, the transfer I1 I1 has associated with it a factor of ( 12 i), which is the opposite
sign to that for the transfer I1+ I1 . So, the cross-peak components arising from I1+ I2 I3 and
I1 I2 I3 have opposite signs.
10.10
Starting with I1+ I2 I3 the first small flip angle pulse creates four possible population terms, which
are the ones of interest in ZCOSY, in which spin one is in the state:
I1+ I2 I3 + 21 i (1) (1) I1 I2 I3
I1+ I2 I3 + 12 i 14 2 (1) I1 I2 I3
I1+ I2 I3 + 21 i (1) 14 2 I1 I2 I3
I1+ I2 I3 + 21 i 14 2 14 2 I1 I2 I3 .
Of these four terms, only the first will be significant for the case of a small flip angle.
There are four additional transfers from I1+ I2 I3 to operators in which spin one is in the state,
but as before only one of these is significant in the small flip angle case:
I1+ I2 I3 1 i (1) (1) I1 I2 I3
2
12 i I1 I2 I3 .
From all that we have done so far we can see that, for small flip angles, the significant contributions
that these terms will make to the 12 cross peak arise from the transfer I2 I2 , with both of the
other operators remaining the same:
+ 12 i I1 I2 I3 + 21 i + 12 i I1 I2 I3
12 i I1 I2 I3 + 21 i 12 i I1 I2 I3 .
So the overall transfers from I1+ I2 I3 caused by the two small flip angles pulses are
I1+ I2 I3 14 2 I1 I2 I3
I1+ I2 I3 + 14 2 I1 I2 I3 .
These are exactly the same as found for small flip angle COSY in the previous exercise (see Eq. 10.2
on page 80 on the previous page).
82
10.11
From section 10.8.1 on page 354, we found that at the end of the constant time T the following
operators are present:
cos (1 t1 ) cos (J12 T ) I1y sin (1 t1 ) cos (J12 T ) I1x
cos (1 t1 ) sin (J12 T ) 2I1x I2z sin (1 t1 ) sin (J12 T ) 2I1y I2z .
The third of these is rotated by the second 90 pulse to a mixture of double- and zero-quantum
coherence:
(/2)(I1x +I2x )
cos (1 t1 ) sin (J12 T ) 2I1x I2z + cos (1 t1 ) sin (J12 T ) 2I1x I2y .
Following section 7.12.1 on page 174, the pure double quantum part of 2I1x I2y is 12 (2I1x I2y + 2I1y I2x ),
so the double quantum term between the final two pulses is
1
2
(/2)(I1x +I2x )
The term cos (1 t1 ) sin (J12 T ) 2I1x I2z gives rise to a diagonal peak centred at {1 , 1 }, as it is
modulated in t1 at 1 and appears on spin one in t2 . There is a single modulating frequency of
1 in 1 i.e. no splitting due to couplings, as expected. In 2 the multiplet is in anti-phase.
The term cos (1 t1 ) sin (J12 T ) 2I1z I2x gives rise to a cross peak centred at {1 , 2 }, as it is modulated
in t1 at 1 and appears on spin two in t2 . Like the diagonal peak, it is in anti-phase in 2 .
Furthermore, note that the terms which give rise to both the diagonal and cross peak appear along
x, so they will have the same lineshape in 2 : this contrasts with the simple constant time COSY
experiment.
The intensity of both the diagonal and cross peaks goes as sin (J12 T ): again, this contrasts with the
simple constant time COSY, where the two kinds of peaks have a different dependence on T.
The advantage of double-quantum filtration is that it results in both diagonal and cross peaks having
the same lineshape in 2 , as well as in 1 .
83
10.12
Following the same kind of analysis as in section 10.8.1 on page 354, we first let I1y evolve under
the coupling for time T: a tree is perhaps useful here:
-I1y
J12
-I1y
-I1y
2I1xI2z
J13
J13
2I1xI3z
2I1xI2z
4I1yI2zI3z
Using this, we can simply read off the four terms which arise as a result of the evolution of the
coupling
cos (J13 T ) cos (J12 T ) I1y + sin (J13 T ) cos (J12 T ) 2I1x I3z
+ cos (J13 T ) sin (J12 T ) 2I1x I2z + sin (J13 T ) sin (J12 T ) 4I1y I2z I3z .
The 180 pulse in the constant time period simply flips the sign of any y or z operators:
+ cos (J13 T ) cos (J12 T ) I1y sin (J13 T ) cos (J12 T ) 2I1x I3z
cos (J13 T ) sin (J12 T ) 2I1x I2z sin (J13 T ) sin (J12 T ) 4I1y I2z I3z .
Now we have to let each of these terms evolve under the offset of spin one for time t1 . The result
will be all of the above terms, multiplied by cos (1 t1 ):
h
cos (1 t1 ) + cos (J13 T ) cos (J12 T ) I1y sin (J13 T ) cos (J12 T ) 2I1x I3z
i
cos (J13 T ) sin (J12 T ) 2I1x I2z sin (J13 T ) sin (J12 T ) 4I1y I2z I3z ,
and a related set of terms multiplied by sin (1 t1 ):
h
sin (1 t1 ) cos (J13 T ) cos (J12 T ) I1x sin (J13 T ) cos (J12 T ) 2I1y I3z
i
cos (J13 T ) sin (J12 T ) 2I1y I2z + sin (J13 T ) sin (J12 T ) 4I1x I2z I3z .
After the final 90 pulse the first set of terms become
h
cos (1 t1 ) + cos (J13 T ) cos (J12 T ) I1z + sin (J13 T ) cos (J12 T ) 2I1x I3y
i
+ cos (J13 T ) sin (J12 T ) 2I1x I2y sin (J13 T ) sin (J12 T ) 4I1z I2y I3y ,
none of which are observable.
The second set of terms, those multiplied by sin (1 t1 ), become
h
sin (1 t1 ) cos (J13 T ) cos (J12 T ) I1x + sin (J13 T ) cos (J12 T ) 2I1z I3y
i
+ cos (J13 T ) sin (J12 T ) 2I1z I2y + sin (J13 T ) sin (J12 T ) 4I1x I2y I3y .
The term in I1x is the diagonal peak: in 2 it will appear as the in-phase doublet of doublets of
spin one, and as the t1 modulation is simply sin (1 t1 ), there will be a single frequency in 1 i.e. no
splitting due to couplings, as expected.
84
The term in 2I1z I2y is the 12 cross peak: in 2 it will appear as the doublet of doublets of spin two,
anti-phase with respect to the 12 coupling, but in-phase with respect to the 23 coupling. In 1
there is a single modulating frequency of 1 , just as for the diagonal peak.
The cross- and diagonal-peak terms have the same modulation in t1 , and so will have the same
lineshape is this dimension. However, in t2 the magnetization which gives rise to the diagonal peak
appears along x, whereas that which gives rise to the cross peak appears along y. So, as for the
two-spin case, in 2 the cross and diagonal peaks will have different lineshapes.
The intensities of the two type of peaks show a different dependence on the couplings:
spin-one diagonal peak : cos (J13 T ) cos (J12 T )
As for the two-spin case, the cross-peak goes as sin (Jactive T ), whereas the diagonal peak goes as
cos (Jactive T ): here the active coupling is J12 . The two kinds of peaks have a common dependence
on the passive coupling J13 , going as the cosine: cos (J13 T ). In words, to give rise to the 12 cross
peak, the magnetization needs to be anti-phase with respect to the 12 coupling, and in-phase with
respect to the 13 coupling, hence the sine dependence on J12 and the cosine dependence on J13 .
For the cross peak to have a maximum intensity J12 T must be an odd multiple of /2, whereas
J13 T must be an even multiple of /2. It might be difficult to satisfy this requirement exactly.
This analysis reveals the main problem with constant time experiments, which is the complex
dependence of the cross-peak intensity on the couplings in the system, and the value of the fixed
delay T.
10.13
Following section 8.7 on page 209, we found for a two-spin system the following S spin operator
after the first S spin 90 pulse:
sin (2JIS 1 ) 2Iz Sy .
We need to adapt this for the more complex spin system we are dealing with here. Firstly, the S spin
has to become the spin S 1 , and the coupling becomes that between I and S 1 , JIS1 :
sin (2JIS1 1 ) 2Iz S1y .
If 1 = 1/(4JIS1 ), then the sine term goes to 1 and so we just have 2Iz S1y at the start of t1 .
Just as before, we now allow the homonuclear coupling, which in this case is between S 1 and S 2 , to
evolve for the whole time T, giving
cos (J12 T ) 2Iz S1y + sin (J12 T ) 4Iz S1x S2z ,
where J12 is the coupling between the two S spins. Note the generation of anti-phase magnetization
with respect to this coupling. We also need to take account of the S spin 180 pulse which inverts
the operators S1y and S1z to give
+ cos (J12 T ) 2Iz S1y sin (J12 T ) 4Iz S1x S2z .
We now allow the S spin offset terms to act for time t1 ; only the offset of S 1 has an effect, giving
cos (S1 t1 ) cos (J12 T ) 2Iz S1y cos (S1 t1 ) sin (J12 T ) 4Iz S1x S2z
sin (S1 t1 ) cos (J12 T ) 2Iz S1x sin (S1 t1 ) sin (J12 T ) 4Iz S1y S2z .
Finally, we need to take account of the I spin 180 pulse, which inverts all of the terms, as they all
contain Iz :
cos (S1 t1 ) cos (J12 T ) 2Iz S1y + cos (S1 t1 ) sin (J12 T ) 4Iz S1x S2z
+ sin (S1 t1 ) cos (J12 T ) 2Iz S1x + sin (S1 t1 ) sin (J12 T ) 4Iz S1y S2z .
85
Note that we do not need to worry about the evolution of the heteronuclear coupling as this is
refocused by the 180 pulses in periods A and B.
Next comes the 90 pulses to the I and S spins: these have the following effect on the operators (the
trigonometric terms have been left out):
2Iz S1y 2Iy S1z
Of these terms, only the first becomes observable on the I spin. We can see that the feature of this
term is that it has remained in-phase with respect to the S 1 S 2 coupling, and is cosine modulated in
t1 .
After these two 90 pulses the observable term on the I spin is
cos (S1 t1 ) cos (J12 T ) 2Iy S1z .
After the following spin echo, assuming 1 = 1/(4JIS1 ), this term simply becomes in-phase along x:
cos (S1 t1 ) cos (J12 T ) Ix .
We then observe this term with broadband S spin decoupling, giving a single peak at {S1 , I }. As a
result of using the constant time procedure, there is no splitting in 1 due to the coupling between
the S spins.
The intensity of the peak depends on cos (J12 T ); for a maximum, J12 T must be a multiple of ,
i.e. J12 T = n or T = n/J12 n = 1, 2, . . .. This condition corresponds to the magnetization being
in-phase with respect to the coupling between the S spins at the end of the constant time T.
In the case that the S spins are 13 C in a globally labelled sample, the couplings we need to worry
about are the one-bond 13 C13 C couplings, simply because these are the largest. Such couplings do
not vary very much with structure, so it should be possible to find a value of T which is a reasonable
compromise for all the carbons in the system.
If there are further S spins coupled to S 1 , then we can see that the intensity of the cross peak will go
as cos (J12 T ) cos (J13 T ) . . .. Again, if the couplings do not cover too wide a range, we can find a
value of T which will give reasonable intensity for all cross peaks.
86
10.14
We just use the idea that the selective 180 pulse drags the curly line (the coherence) from the
energy level shared by the pulse and the coherence, to the energy level at the other end of the 180
pulse.
4
3
4
3
2
1
2
1
180 to 1-2
180 to 1-3
4
3
4
3
2
1
2
1
180 to 1-3
1
result
180 to 3-4
The same idea is used below. Note that the selective 180 pulse and the coherence must share an
energy level for anything to happen.
(a)
4
4
3
4
3
2
1
2
1
180 to 1-2
180 to 2-4
(b)
4
4
3
2
1
180 to 3-4
4
3
2
1
180 to 2-4
1
result
Transfer (a) can also be achieved by pulses to 34 and then 13; similarly, transfer (b) can also be
achieved by pulses to 12 and 13.
87
10.15
After the 90 (y) pulse to the I spin and the first 90 pulse to the S spin, and assuming that
= 1/(4JIS ), we have already worked out that the state of the system is 2Iz Sy (see section 8.7
on page 209). It is then just a question of following the evolution of this term under the influence
of the S spin offset and the IS coupling.
The final stage is to use the trigonometric identities (given in the appendix). For example, the term
S x is multiplied by the trigonometric term cos (S t1 ) sin (JIS t1 ). Applying the identity
cos A sin B
1
2
gives
cos (S t1 ) sin (JIS t1 )
1
2
10.16
1
2
(a) + (d)
S4 =
1
2
(a) (d) ,
expt
Ix
(a)
(c+ c )
(s+ + s )
(c+ c )
(s+ + s )
(b)
(c+ c )
(s+ s )
(c+ + c )
(s+ + s )
(c)
(c+ c )
(s+ + s )
(c+ + c )
(s+ s )
(d)
(c+ c )
(s+ s )
(c+ c )
(s+ s )
S3
=
=
(a) + (d)
(c+ c ) Ix + (c+ c ) 2Ix Sz
| {z } |
{z
}
1
2
S4
=
=
88
1
2
(a) (d)
(s+ + s ) Iy + (s+ + s ) 2Iy Sz .
| {z } |
{z
}
G
As before, we have a clean separation of x- and y-magnetization. If the two combinations are
processed separately, and a 90 phase correction applied to one combination in both dimensions,
we will have two spectra in which all peaks are in the absorption mode.
Term E is in-phase in 2 and also in-phase in 1 , so all four peaks of the multiplet have the same
sign, which is this case is negative. The multiplet is the same as from term A given in Eq. 10.12 on
page 365. Term F is anti-phase in each dimension, so gives rise to an anti-phase square array. Note,
however, that the overall sign is opposite to that of term B given in Eq. 10.12 on page 365.
Term G is in-phase in 2 and anti-phase in 1 , and is again opposite in overall sign to term C in
Eq. 10.13 on page 365. Finally, term H is anti-phase in 2 , but in-phase in 1 : it is identical to term
D in Eq. 10.13 on page 365.
The multiplets from the four terms, along with the way they combine to give S 3 and S 4 , are shown
in the diagram below, which should be compared to Fig. 10.34 on page 365.
E
+
G
S3 + S4
S4
S3 - S4
=
H
S3
We see from the digram that by combining the spectra S 3 and S 4 , either as (S 3 + S 4 ) or (S 3 S 4 ),
we are left with just one line of the multiplet, either top left, or bottom right.
10.17
Aside from the extra complication of the pulse sequence and data processing, probably the only
significant difficulty is that the peak does not appear at {S , I }, but offset from this by 12 JIS in
each dimension. Account needs to be take of this when comparing TROSY type spectra with other
spectra.
11
Coherence selection: phase cycling and field
gradient pulses
11.1
h
i
Iiz
Ii Iix iIiy cos Iix + sin Iiy i cos Iiy sin Iix
h
i
h
i
= cos Iix i Iiy + i sin Iix i Iiy
h
i
= (cos + i sin ) Iix i Iiy
= exp (i) Ii .
Assigning coherence orders
p1 = 1
I1+ I2 :
p1 = 1
2I1z I2y 2
2I1x I2x + 2I1y I2y
p2 = 1
I1x
1
2
I2y
1
2i
1
2i I1z
p2 = 1
p3 = 0
I1+ + I1 :
I2+ I2 :
I2+ I2 :
p = p1 + p2 = 0
p = p1 + p2 + p3 = 2
p = 1
p = 1
p1 = 0
p2 = 1
p = 1
2 12 12 I1+ + I1 I2+ + I2 + 2 2i1 2i1 I1+ I1 I2+ I2
i
h
1
1+ I2 + I1 I2+ + I1 I2 I1+ I2+ + I1+ I2 + I1 I2+ I1 I2
I
I
+
I
1+
2+
2
I1+ I2 + I1 I2+
hence p1 = 1
p2 = 1
or
p1 = 1
p2 = 1
p= 0
Chapter 11: Coherence selection: phase cycling and field gradient pulses
90
1
2
1
2
1
2i
I+ + I :
pI = 1
S + S :
pS = 1
I+ + I Sz :
pS = 0
pI = 1
2Ix Sy 2 12 2i1 I+ + I S + S :
pS = 1
pI = 1
Following section 11.1.2 on page 384, free evolution results in these operators acquiring a phase
exp i (p1 +p2 +...) t ,
where (p1 +p2 +...) = p1 1 + p2 2 + . . .. The table gives this phase term for each operator:
operator
p1 or pI
I1+
+1
p2 or pS
I2
p3
phase term
exp (i 1 t)
exp (i 2 t)
I1+ I2+
+1
+1
1 + 2
exp (i [1 + 2 ]t)
I+ S
+1
I S
exp (i [I S ]t)
I1 I2 I3
1 + 2 + 3
exp (i [1 + 2 + 3 ]t).
11.2
(c) ZCOSY
t2
t1
+3
+2
+1
0
-1
-2
-3
t1
t2
t1
+2
+1
0
-1
-2
+2
+1
0
-1
-2
(d) HSQC
I
S
pI
+1
0
-1
pS
+1
0
-1
t1
t2
t2
Chapter 11: Coherence selection: phase cycling and field gradient pulses
91
Note that in HSQC, sequence (d), we have pS = 1 and pI = 0 during t1 i.e. S spin single-quantum
coherence, and that during t2 we have pI = 1 and pS = 0, as these are the coherence orders for
observable signals on the I spin.
HMQC
t2
I
t1
S
pI
+1
0
-1
pS
+1
0
-1
(a) As described in section 11.3 on page 389, the P-type spectrum has the same sign of p in t1 and
t2 : this is the solid line in the CTP. The resulting spectrum will be phase modulated in t1 , and
so is frequency discriminated.
(b) The N-type spectrum has the opposite sign of p in t1 and t2 : this is the dashed line in the CTP;
like the P-type spectrum, the N-type spectrum is frequency discriminated.
(c) To be able to give absorption mode lineshapes we need to retain symmetrical pathways in t1
i.e. pS = 1. Thus we need to select both the solid and dashed CTP. The resulting spectrum
is not frequency discriminated, but discrimination can be achieved using the SHR or TPPI
methods (section 8.12 on page 226).
11.3
By inspecting Fig. 11.5 on page 392 we can determine the form of the signal from detectors A and
B using simple trigonometry. For example in (b) it is clear that the component along A is sin (t)
whereas that along B is cos (t). The table gives these components and the required combinations
for all four cases:
A
combination
result
(a)
cos (t)
sin (t)
A+iB
(b)
sin (t)
cos (t)
BiA
(c)
cos (t)
sin (t)
A i B
(d)
sin (t)
cos (t)
B + i A
Each combination gives modulation of the form exp (i t), which will all give the same lineshape on
Fourier transformation.
Following the approach of Fig. 11.6 on page 394, for the case where the pulse goes [x, y, x, y]
and the receiver phase goes [180 , 270 , 0 , 90 ] we have
Chapter 11: Coherence selection: phase cycling and field gradient pulses
90(x )
90(y )
90(-x )
rx phase
-180
92
90(-y )
y
-270
-90
A 90 (x) pulse places the magnetization along y and then precession through an angle t rotates the
vector towards +x. Similarly, a 90 (y) pulse places the magnetization along +x, and then precession
rotates the vector towards +y.
The receiver phase is measured clockwise from 3 oclock, and is indicated by the bullet . We
see that in each diagram there is a constant angle between the position of the magnetization and
the receiver phase. As a result, each combination of pulse and receiver phase will give the same
lineshape, and so all four spectra will add up.
11.4
For p = 1 the phase shift experienced by the pathway when the pulse is shifted in phase by is
p = (1) = . Similarly for p = 0 the phase shift is 0 = 0, and for p = 5 the
phase shift is 5 = 5. The table gives the phase shifts for each of these three pathways:
pulse phase
p = 1
p = 0
p = 5
step
equiv(5 )
90
90
450
270
180
180
900
180
270
270
1350
90
These phases can be represented in the manner of Fig. 11.8 on page 397:
Chapter 11: Coherence selection: phase cycling and field gradient pulses
93
(2)
(3)
(4)
(2)
(3)
(4)
For p = 1, steps (1) and (3) have the signal and receiver in alignment, whereas in steps (2) and
(4) the signal and the receiver are opposed. As a result steps (1) and (3) will cancel steps (2) and (4).
For p = 0, steps (1) and (3) will cancel as the signal and the receiver are aligned in one and
opposed in the other. Similarly, steps (2) and (4) will cancel as in step (2) the signal is 90 ahead of
the receiver, whereas in step (4) it is 90 behind i.e. there is an overall shift of 180 .
For p = 5 the signal phase shifts are exactly the same as those for p = 3, so both pathways are
selected. This is of course exactly what is expected for a four-step cycle since 3 + 2 4 = +5 i.e.
p = 3 and p = 5 are separated by a multiple of four.
11.5
The second pulse has p = 2, so if the pulse phase goes [0 , 90 , 180 , 270 ] the receiver phase
shifts must be [0 , 180 , 0 , 180 ]. The first pulse has p = +1, so if the pulse phase goes
[0 , 90 , 180 , 270 ] the receiver phase shifts must be [0 , 270 , 180 , 90 ].
In the first four steps, 2 therefore goes [0 , 90 , 180 , 270 ], 1 remains fixed, and the receiver
goes [0 , 180 , 0 , 180 ].
In the second group of four steps, 2 does the same, but 1 is now 90 , and this results in an extra
270 which must be added to the receiver phase shifts from the first group of four. The required
receiver phase shifts are therefore
[0 +270 , 180 +270 , 0 +270 , 180 +270 ] [270 , 90 , 270 , 90 ].
In the third group of four steps 1 is 180 , and this results in an extra 180 which must be added
to the receiver phase shifts from the first group of four. Finally, for the fourth group of four steps
1 is 270 , and 90 must be added to the receiver phase shifts. The complete sixteen-step cycle is
therefore
Chapter 11: Coherence selection: phase cycling and field gradient pulses
94
step
rx
step
rx
180
180
90
180
10
180
90
180
11
180
180
180
270
180
12
180
270
90
270
13
270
90
90
90
90
14
270
90
270
90
180
270
15
270
180
90
90
270
90
16
270
270
270
rx
step
rx
180
180
90
90
10
90
180
270
180
180
11
180
180
270
270
12
270
180
90
90
90
13
270
270
90
90
180
14
90
270
180
90
270
15
180
270
90
270
90
16
270
270
180
11.6
For p = 2 the phase shift experienced by the pathway when the pulse is shifted in phase by is
p = (2) = 2. So, as the pulse goes [0 , 120 , 240 ] the pathway experiences phase
shifts of [0 , 240 , 480 ] which are equivalent to [0 , 240 , 120 ]. So, to select p = 2, we would
use the cycle:
pulse: [0 , 120 , 240 ]
On modern spectrometers, the receiver phase can be shifted by arbitrary amounts, not just multiples
of 90 .
The selectivity of this three-step sequence can be represented in the manner described on p. 398:
5
(4)
(3) 2
(1)
(0)
(2)
(3)
Chapter 11: Coherence selection: phase cycling and field gradient pulses
95
Here the boldface numbers are the values of p which are selected, and the numbers in brackets are
the values which are rejected; these selected values are separated by three, as we are dealing with a
three-step cycle.
The CTP for N-type COSY is:
t2
t1
+1
0
-1
The second pulse has p = 2, so we can use the three-step cycle described above to select this. As
the first pulse can only generate p = 1, this three step cycle is sufficient to select the overall pathway
we require. To be specific, p = 1 present during t1 would only lead to observable coherence via the
pathway p = 0 on the second pulse, which is blocked by this three-step cycle.
For P-type COSY (Fig. 11.4 (b) on p. 390), p = 0 on the second pulse. This is selected by the
following three-step cycle of the second pulse:
pulse: [0 , 120 , 240 ]
receiver: [0 , 0 , 0 ].
Such a cycle would be sufficient to select the wanted pathway as it would reject the p = 2 pathway
on the second pulse.
11.7
1
2 3
t1
rx
t2
+3
+2
+1
0
-1
-2
-3
Grouping together the first two pulses means that they are required to achieve the transformation
p = 3. Concentrating for the moment on the pathways with p = 3, shifting the phase of the
first two pulses by will result in a phase shift of p = (3) = 3.
If the pulse goes through the phases [0 , 60 , 120 , 180 , 240 , 300 ] then the phase acquired by
the pathway with p = 3 is [0 , 180 , 360 , 540 , 720 , 900 ]. Reducing these to the range 0 to
360 gives [0 , 180 , 0 , 180 , 0 , 180 ]. So the phase cycle needed is
1 and 2 : [0 , 60 , 120 , 180 , 240 , 300 ]
Chapter 11: Coherence selection: phase cycling and field gradient pulses
96
11.8
1
2
t1
rx
t2
+2
+1
0
-1
-2
The first two pulses achieve the transformation p = 0, so a four-step cycle will be:
1 and 2 : [0 , 90 , 180 , 270 ]
receiver: [0 , 0 , 0 , 0 ].
Axial peak suppression (section 11.7 on page 403) involves shifting the phase of the first pulse
[0 , 180 ] and similarly for the receiver. Combining these two cycles gives eight steps:
step
90
180
270
180
270
90
90
180
270
90
180
270
rx
180
180
180
180
2
t1
rx
t2
+2
+1
0
-1
-2
We need to select p = 1 on the last pulse. A suitable four-step cycle is [0 , 90 , 180 , 270 ] for 3
and [0 , 90 , 180 , 270 ] for the receiver.
We also need to select p = +1 on the first pulse. The four-step cycle [0 , 90 , 180 , 270 ] for 1
and [0 , 270 , 180 , 90 ] for the receiver achieves this selection.
The complete sixteen-step cycle is
step
rx
step
rx
180
180
90
270
10
90
180
90
180
180
11
180
180
270
90
12
270
180
270
90
90
13
270
270
90
90
14
90
270
180
180
90
270
15
180
270
90
270
90
180
16
270
270
Chapter 11: Coherence selection: phase cycling and field gradient pulses
97
It is not necessary to add explicit axial peak suppression to this cycle as we are selecting p = +1 on
the first pulse, and so all of the peaks we see in the spectrum must derive from the first pulse.
11.9
RF
G1
1
G2
2
+2
+1
0
2 = (2) G2 z2 .
and
11.10
I
S
G
pI
+1
0
-1
pS
+1
0
-1
G1
1
G2
2
Chapter 11: Coherence selection: phase cycling and field gradient pulses
98
In the heteronuclear case we use Eq. 11.9 on page 414 to find the spatially dependent phase:
(z) = (pI I + pS S ) G z t.
During the first gradient pI = 0 and pS = 1, whereas during the second pI = 1 and pS = 0. So the
spatially dependent phases are
1 = S G1 z1
and
2 = I G2 z2 .
Chapter 11: Coherence selection: phase cycling and field gradient pulses
99
11.11
t1
t2
t1
1
1 2 3
G
G1 G2 G3
1 2
3
G
G1 G2 G3
+3
+2
+1
0
-1
-2
-3
+2
+1
0
-1
-2
t2
t1
G1 G2
+1
0
-1
t2
t1
t2
I
1 1
G
+2
+1
0
-1
-2
t1
S
G1 G1
G2
G3
G
G1
G2
G3
+1
pI 0
-1
pS
+1
0
-1
(a) P-type DQF COSY We have chosen p = 2 in the interval between the last two pulses, but it
would have been just as acceptable to choose p = 2. The pathway will give a P-type spectrum
as p = 1 is present during t1 . The refocusing condition is
G1 1 2 G2 2 + G3 3 = 0.
If the gradients are all the same length, then one choice is for the strengths to be in the ratio
G1 : G2 : G3 = 1 : 1 : 1.
(b) N-type TQF COSY We have chosen p = 3 in the interval between the last two pulses, but
it would have been just as acceptable to choose p = 3. The pathway will give an N-type
spectrum as p = +1 is present during t1 . The refocusing condition is
G1 1 3 G2 2 + G3 3 = 0.
If the gradients are all the same length, then one choice is for the strengths to be in the ratio
G1 : G2 : G3 = 1 : 1 : 4.
(c) N-type COSY The pathway will give a N-type spectrum as p = +1 is present during t1 . The
refocusing condition is
G1 1 + G2 2 = 0.
If the gradients are all the same length, then the strengths must be in the ratio
G1 : G2 = 1 : 1
Chapter 11: Coherence selection: phase cycling and field gradient pulses
100
(d) Double-quantum spectroscopy The two gradients G1 serve to clean up the 180 pulse in
the spin echo (see section 11.12.3 on page 418). Double-quantum coherence is dephased by
G2 and then rephased by G3 ; to control phase errors due to the underlying evolution of the
offsets, both gradients are placed within spin echoes (see section 11.12.5 on page 419). We
will need to record separate P- and N-type spectra, and then recombine them in order to
obtain an absorption mode spectrum (see section 11.12.2 on page 417); the N-type pathway
is given by the solid line, and the P-type by the dashed line.
The refocusing condition for the N-type pathway is
2 G2 2 + G3 3 = 0.
If the gradients are the same length, then the strengths must be in the ratio
G2 : G3 = 1 : 2.
The refocusing condition for the P-type pathway is
2 G2 2 + G3 3 = 0.
If the gradients are the same length, then the strengths must be in the ratio
G2 : G3 = 1 : 2.
(e) N-type HSQC G1 is a purge gradient (see section 11.12.6 on page 420). S spin magnetization is dephased by G2 and rephased after transfer to I by G3 . The refocusing condition
is
S G2 2 + I G3 3 = 0.
If the gradients are both the same length, then the strengths must be in the ratio
G 2 : G 3 = I : S .
For the case where the I spin is 1 H and the S spin is 13 C, I : S = 4, and so the refocusing
condition is
G2 : G3 = 4 : 1.
12
Equivalent spins and spin-system analysis
12.1
In the following Ha Hb is a short hand for saying that the environments, and hence shifts, of Ha
and Hb are the same. Likewise Ha Hb is a shorthand for the coupling between Ha and Hb . In this
notation, Ha Hb Hc Hd means that the Ha Hb coupling is equivalent to the Hc Hd coupling.
(i) All the Fe equivalent due to the four-fold axis along the BrFa bond.
(a)
Fa
Fe
(ii) Each Fe is two bonds from each Fa and the angle between the two bonds
is 90 in each case. Thus all the Fe Fa couplings are the same.
Fe
Br
Fe
Fe
(b)
F1
H1
Br
H2
Br
F2
H4
H3 H6 H5
H1
H2
102
H1
F2
H2
H6
(e)
(i) Rotation about C2 axis out of the plane of the paper (indicated by the grey
dot) means that H1 H4 , H2 H5 , and H3 H6 .
Cl
H5
H1
H4
H2
Cl
(ii) Ignoring couplings over more than four bonds means that H1 , H2 and H3
are isolated from H4 , H5 and H6 .
(iii) H1 , H2 , H3 .
H3
(f)
H6
Cl
H5
H1
H4
H2
H3
Cl
(ii) Ignoring couplings over more than four bonds means that H1 and H2 are
isolated from H3 , H4 , H5 and H6 .
(iii) H1 H2 so these form an A2 system.
(iv) H4 H6 , H4 H3 : not magnetically equivalent.
(v) Remaining spins form an AA0 XX0 system.
(g)
(i) All three rotamers about the CCH3 bond are likely to be equally populated since three identical groups (in fact protons) are attached to one of
the carbons.
COOH
H
H
NH2
(ii) This is analogous to the case of chloroethane described in the text i.e. the
couplings between the CH proton and each of the CH3 protons are the
same when averaged over the rotamers.
(iii) Thus the three methyl protons are magnetically equivalent.
(iv) AX3 .
COOH
H2
H1
103
COOH
COOH
H3
Cl
H2
H3
Cl
NH2
H1
NH2
H1
NH2
H3
R2
Cl
R1
H2
R3
(i) There is no reason to assume that the three rotamers are equally populated.
(ii) H2 , H3 .
(iii) AMX spin system (H2 and H3 are pro-chiral).
12.2
S
z
S x cos (S t) S x + sin (S t) Sy .
We are only interested in the subsequent evolution of the first term as this is the one with
cos (S t) modulation. This term evolves under the I1 S coupling to give
2Jt I S
1z z
cos (S t) S x cos (Jt) cos (S t) S x + sin (Jt) cos (S t) 2I1z Sy .
Again it is only the evolution of the first term we need to follow, and under the influence of
the I2 S coupling this is
2Jt I S
2z z
cos (Jt) cos (S t) S x cos (Jt) cos (Jt) cos (S t) S x + sin (Jt) cos (Jt) cos (S t) 2I2z Sy .
1
2
1
2
1
2
1
2
1
4
(c) Assuming that x-magnetization is detected, the above expression gives the form of the freeinduction signal. Cosine Fourier transformation of this cosine modulated signal gives a peak
corresponding to each of these terms. There will be a peak at S of relative intensity 2, and
peaks at (S 2J) with relative intensity 1 i.e. a 1:2:1 triplet.
The spacing between the outer lines is therefore 4J rad s1 , which is 2J Hz.
(d) First compute evolution under the offset
t S
S
z
2I1z S x cos (S t) 2I1z S x + sin (S t) 2I1z Sy .
104
We are only interested in the subsequent evolution of the second term as this is the one with
sin (S t) modulation. This term evolves under the I1 S coupling to give
2Jt I1z Sz
sin (Jt) sin (S t) S x cos (Jt) sin (Jt) sin (S t) S x sin (Jt) sin (Jt) sin (S t) 2I2z Sy .
Now applying the trigonometric identities gives
cos (Jt) sin (Jt) sin (S t)
1
4
S
z
4I1z I2z S x cos (S t) 4I1z I2z S x + sin (S t) 4I1z I2z Sy .
(12.1)
cos (S t) 4I1z I2z S x cos (Jt) cos (S t) 4I1z I2z S x + sin (Jt) cos (S t) 2I2z Sy .
Evolution of the second term on the right under the I2 S coupling will result in the required
term S x :
2Jt I2z Sz
sin (Jt) cos (S t) 2I2z Sy cos (Jt) sin (Jt) cos (S t) 2I2z Sy sin (Jt) sin (Jt) cos (S t) S x .
sin (Jt) sin (Jt) cos (S t)
1
4
There will be peaks at (S 2J) of relative intensity +1, and a peak at S of relative intensity
2 i.e. a +1:2:+1 triplet.
The second term in Eq. 12.1 does not lead to a term in S x .
105
12.3
We need to be intelligent about the way we approach this or we will waste a lot of time computing
terms which ultimately do not end up as S x . The evolution under the offset, the I1 S , the I2 S and
I3 S couplings needs to be considered.
If we start with S x then from the evolution under the offset and the three couplings we need to pick
up the term in which this operator does not change, which means that each will have a cosine factor
cos (S t) for the offset term, and cos (Jt) for each coupling term. Thus, without any calculation we
deduce that the wanted term is
cos (Jt) cos (Jt) cos (Jt) cos (S t) S x .
Repeatedly applying an appropriate selection of the given identities gives
1
8
This is a 1:3:3:1 quartet with peaks at (S 3J), (S J), (S + J) and (S + 3J), respectively.
If we start with 2I1z S x , then in order to generate a term in S x , we need first to allow this anti-phase
term to go become in phase with respect to the I1 S coupling, generating Sy . This term then needs
to remain in phase under the evolution of the I2 S and I3 S couplings. Finally, the Sy term needs to
evolve under the offset to give the wanted S x term. In summary
I S coupling
I S coupling
I S coupling
S offset
1
2
3
2I1z S x Sy Sy Sy S x
The first arrow is associated with a factor sin (Jt), and the second and third arrows both generate
factors of cos (Jt). The final arrow generates a factor sin (S t). Overall the S x term is of the form
sin (S t) cos (Jt) cos (Jt) sin (Jt) S x .
Repeatedly applying an appropriate selection of the given identities gives
18 cos (S t 3Jt) 81 cos (S t Jt) + 81 cos (S t + Jt) + 18 cos (S t + 3Jt).
This is a 1:1:+1:+1 quartet with peaks at (S 3J), (S J), (S + J) and (S + 3J),
respectively.
If we start with 4I1z I2z S x , then in order to generate a term in S x we need first to allow this doubly
anti-phase term to become in phase with respect to the I1 S coupling, and then in phase with respect
to the I2 S coupling. This term then needs to remain in phase under the evolution of the I3 S
coupling, and as it is already along x no further evolution is needed under the offset. In summary
I S coupling
I S coupling
I S coupling
S offset
1
2
3
4I1z I2z S x 2I2z Sy S x S x S x
A factor of sin (Jt) is associated with the first two arrows, and a factor of cos (Jt) is associated
with the third; the factor arising from the final arrow is cos (S t). Overall the S x term is of the form
cos (S t) cos (Jt) sin (Jt) sin (Jt) S x .
Repeatedly applying an appropriate selection of the given identities gives
+ 18 cos (S t 3Jt) 81 cos (S t Jt) 81 cos (S t + Jt) + 18 cos (S t + 3Jt).
106
I S coupling
I S coupling
S offset
1
2
3
8I1z I2z I3z S x 4I2z I3z Sy 2I3z S x Sy S x
A factor of sin (Jt) is associated with the first three arrows, and a factor of sin (S t) arises from the
final arrow. Overall the S x term is of the form
sin (S t) sin (Jt) sin (Jt) sin (Jt) S x .
Repeatedly applying an appropriate selection of the given identities gives
18 cos (S t 3Jt) + 83 cos (S t Jt) 38 cos (S t + Jt) + 18 cos (S t + 3Jt).
This is a 1:+3:3:+1 quartet with peaks at (S 3J), (S J), (S + J) and (S + 3J),
respectively.
12.4
(a) There is only one coupling present in an IS spin system; the coupling Hamiltonian therefore
contains the single term 2J I1z Sz . The operator Sy evolves into a term that is anti phase with
respect to this coupling:
2J I S t
1z z
Sy cos (Jt) Sy sin (Jt) 2I1z S x .
The I2 S spin system contains an additional coupling between the S spin and a second I spin.
We can therefore take the result for the IS system above and calculate its evolution under this
second coupling term 2J I2z Sz :
2J I S t
2z z
cos (Jt) Sy sin (Jt) 2I1z S x cos2 (Jt) Sy cos (Jt) sin (Jt) 2I2z S x
sin (Jt) cos (Jt) 2I1z S x sin2 (Jt) 4I1z I2z Sy .
To calulate the evolution of Sy under the influence of the couplings in the I3 S spin system we
take the result obtained for the I2 S system, and let the operators evolve under the term in the
Hamiltonian that is due to the coupling between the S spin and the third I spin i.e. 2J I3z Sz .
The result is
cos3 (Jt) Sy cos2 (Jt) sin (Jt) 2I3z S x
cos (Jt) sin (Jt) 2I2z S x 2J I3z Sz t cos2 (Jt) sin (Jt) 2I2z S x cos (Jt) sin2 (Jt) 4I2z I3z Sy
107
(b) If we allow the triply anti-phase operator to evolve under the influence of the three couplings
of the I3 S spin system, we obtain:
2J I1z Sz t
8I1z I2z I3z Sy cos (Jt) 8I1z I2z I3z Sy sin (Jt) 4I2z I3z S x
2J I S t
2z z
cos2 (Jt) 8I1z I2z I3z Sy cos (Jt) sin (Jt) 4I1z I3z S x
sin (Jt) cos (Jt) 4I2z I3z S x sin2 (Jt) 2I3z Sy
2J I S t
3z z
cos3 (Jt) 8I1z I2z I3z Sy cos2 (Jt) sin (Jt) 4I1z I2z S x
cos2 (Jt) sin (Jt) 4I1z I3z S x cos (Jt) sin2 (Jt) 2I1z Sy
sin (Jt) cos2 (Jt) 4I2z I3z S x sin2 (Jt) cos (Jt) 2I2z Sy
sin2 (Jt) cos (Jt) 2I3z Sy + sin3 (Jt) S x .
The times at which only in-phase operator S x is generated are such that cos (Jt) = 0 and
sin (Jt) = 1, i.e. when t = 1/(2J), 3/(2J), 5/(2J), and so on.
12.5
The function cos2 () sin() can be rewritten using the identity sin2 () + cos2 () 1 so that it is
expressed entirely in terms of sin():
cos2 () sin() sin() sin3 ().
Differentiating this with respect to gives:
d
sin() sin3 () = cos() 3 sin2 () cos()
d
h
i
= cos() 1 3 sin2 () .
The turning points are found by setting the derivative to zero so either cos() = 0 or 1 3 sin2 () = 0.
The first equality gives = /2, which is plainly not a maximum since cos2 () sin() = 0 for = /2.
The second equality can be solved to give
1 3 sin2 () = 0
q
1
sin() =
3 .
Therefore the greatest amount of the singly anti-phase term is generated when is given by
r
1
= sin1
3
= 0.6155 rad s1 .
Given that = 2J it therefore follows that = 0.0980/J .
The amount of the doubly anti-phase term that is present goes as cos(2J) sin2 (2J). The delay for
which this is a maximum can be found by maximizing the function cos() sin2 (). Rewriting sin2 ()
as 1 cos2 () expresses everything in terms of cos(). Differentiating with respect to gives:
d
cos() cos3 () = sin() + 3 sin() cos2 ().
d
108
Setting the derivative to zero means that either sin() = 0 or 3 cos2 () 1 = 0. Plainly sin() = 0 is not
a maximum. Solving the other inequality gives
r
1
.
cos() =
3
Hence = 0.9553 rad, and so = 0.1520/J .
12.6
The intensity of the peak due to an In S spin system in the APT spectrum is given by cosn (2J), and
so setting = 1/(2J) ensures that peaks from the IS and I3 S spin systems are negative, whilst those
from the S and I2 S systems are positive. If the chosen compromise value of J is 130 Hz, the value
of is
1
= 3.85 ms .
=
2 130
The acetylene group forms an IS spin system with a coupling constant of 250 Hz. The resulting
peak would be expected to have a negative intensity. However, using the compromise value of
that was calculated above, we find that the actual intensity is:
cos(2 250 3.58 103 ) = 0.97.
This peak therefore has the opposite sign to that expected.
12.7
We will begin by calculating the form of the COSY spectrum of the I2 S spin system. Starting with
I1z , the first 90 pulse generates I1y . This term then evolves under the offset of I1 , and the coupling
between I1 and S . So, at the end of t1 , we have:
I t
I 1z 1
I1y cos(I t1 )I1y + sin(I t1 )I1x
2J I S t
1z z 1
cos(I t1 ) cos(Jt1 )I1y + cos(I t1 ) sin(Jt1 )2I1x Sz
+ sin(I t1 ) cos(Jt1 )I1x + sin(I t1 ) sin(Jt1 )2I1y Sz .
The second 90 pulse then acts to give two observable terms, which arise from the third and fourth
terms above. These are:
sin(I t1 ) cos(Jt1 )I1x
sin(I t1 ) sin(Jt1 )2I1z Sy
: diagonal-peak multiplet
: cross-peak multiplet.
1
2
which is an in-phase doublet centred at the offset of the I spins. In addition, the operator I1x will
evolve during t2 to give an in-phase doublet on the same spin.
The t1 modulation of the cross-peak multiplet is
sin(I t1 ) sin(Jt1 )
1
2
109
which represents a doublet on the I spin that is anti phase with respect to the I1 S coupling. During
t1 , the operator 2I1z Sy will evolve to give a 1:0:+1 triplet which is centred on the S spin (see
Fig. 12.6 on page 452), and which is anti phase with respect to one of the IS couplings. Both
the diagonal- and cross-peak multiplets are illustrated below, where as usual we have formed the
two-dimensional multiplet by multiplying together the two one-dimensional multiplets along each
axis.
2J
2J
2J
2J
2
Diagonal-peak multiplet
Cross-peak multiplet
If we repeat the calculation for the I3 S spin system, we find that we obtain the same mathematical
forms for the diagonal- and cross-peak multiplets. The reason for this is that I1y can only evolve
under the I1 S coupling and not under any of the other couplings between the I spins and the S
spin. Therefore, both terms have the same form of t1 modulation as for the I2 S spin system, i.e.
either an in-phase or anti-phase doublet. The structure of the diagonal-peak multiplet in 2 is also
the same as for the I2 S spin system since I1x evolves to give an in-phase doublet.
However the t2 modulation of the cross-peak multiplet is rather different, as a result of the additional
coupling between the S spin and the third I spin; it now takes the form of a 1:1:+1:+1 quartet
that is anti phase with respect to one coupling (see Fig. 12.6 on page 452). Both multiplets are
illustrated below.
2J
2J
2J
1
2
Diagonal-peak multiplet
2
Cross-peak multiplet
2J
110
We now return to the I2 S spin system and repeat the calculation, this time starting with Sz . The first
90 pulse gives us Sy which evolves under the S spin offset and both IS couplings:
S t
S z 1
Sy cos(S t1 )Sy + sin(S t1 )S x
2J I S t
1z z 1
cos(S t1 ) cos(Jt1 )Sy + cos(S t1 ) sin(Jt1 )2I1z S x
+ sin(S t1 ) cos(Jt1 )S x + sin(S t1 ) sin(Jt1 )2I1z Sy
2J I S t
2z z 1
cos(S t1 ) cos2 (Jt1 )Sy + cos(S t1 ) cos(Jt1 ) sin(Jt1 )2I2z S x
+ cos(S t1 ) sin(Jt1 ) cos(Jt1 )2I1z S x + cos(S t1 ) sin2 (Jt1 )4I1z I2z Sy
: diagonal-peak multiplet
: cross-peak multiplet
: cross-peak multiplet.
1
4
sin(S t1 + Jt1 ) +
1
2
+ 14 sin(S t1 Jt1 ),
which is an in-phase 1:2:1 triplet centred on S . During t2 , S x will evolve to also give an in-phase
triplet.
The cross-peak term has the following t1 modulation:
sin(S t1 ) cos(Jt1 ) sin(Jt1 )
1
4
This is a 1:0:+1 triplet that is centred on S in which one of the splittings is in anti phase. The
evolution of both 2I1y Sz and 2I1y Sz gives exactly the same multiplet structure in 2 , namely a doublet
that is anti phase with respect to the relevant IS coupling. Both multiplets are shown below.
2J
2J
2J
2J
1
2
Diagonal-peak multiplet
2
Cross-peak multiplet
111
It now remains to compute the spectrum of the I3 S spin system starting out from Sz . The calculation
results in the following four observable operators:
sin(S t1 ) cos3 (Jt1 )S x
sin(S t1 ) cos2 (Jt1 ) sin(Jt1 )2I3y Sz
sin(S t1 ) cos2 (Jt1 ) sin(Jt1 )2I2y Sz
2
: diagonal-peak multiplet
: cross-peak multiplet
: cross-peak multiplet
: cross-peak multiplet.
1
8
which is an in-phase quartet on the S spin. Likewise, S x will evolve during t2 to give an in-phase
quartet.
All three cross-peak multiplets lie on top of each other. The t1 modulation can be expanded to give
sin(S t1 ) cos2 (Jt1 ) sin(Jt1 )
1
8
which is a 1:1:+1:+1 S spin quartet that is anti-phase with respect to one of the splittings.
During t2 , the anti-phase operators will evolve to give an anti-phase doublet on the I spin. Both
multiplets are shown below.
2J
2J
2J
1
2
Diagonal-peak multiplet
2
Cross-peak multiplet
2J
112
12.8
18.7 Hz
9.18 Hz
31.1 Hz
40.8 Hz
D
D
JAB
JAB
average = 12
frequency / Hz
(a)
D = 31.1 9.18 = 21.92
D2
(A B ) =
=
(A + B ) =
A
=
=
B
In summary A = 15.00 Hz
average: D = 22.02 Hz
average: = 49.8 Hz
2
(A B )2 + JAB
p
22.022 9.612
19.81 Hz
49.8
1
(49.8 + 19.81)
2
15.00 Hz
1
(49.8 19.81)
2
34.81 Hz.
B = 34.81 Hz
|JAB | = 9.7 Hz
(b) We note that (A B ) = 19.81 Hz and JAB = 9.7 Hz, so both quantities are positive which
means that must be in the range 0 to 21 .
JAB
(A B )
9.61
19.81
0.4851 rad
hence
sin
0.4365
tan
=
=
1
2
1
2
(1 + sin ) =
0.718
(1 sin ) =
0.282
113
10
20
30
40
frequency / Hz
50
(c) If the field is doubled, the offsets are doubled so that A = 2 15.00 = 30.00 Hz and B =
2 34.81 = 69.62 Hz, but the coupling remains the same.
A + B
sin
0.236
(1 + sin ) =
0.618
(1 sin ) =
0.382
D =
=
tan
=
=
1
2
1
2
20
line
expression
1
2
(+D JAB )
1
2
0.618
1
2
(+D + JAB )
1
2
0.382
1
2
(D JAB )
1
2
0.382
1
2
(D + JAB )
1
2
0.618
30
frequency / Hz
40
50
intensity
60
70
frequency / Hz
80
114
As expected, there is less roofing at this higher field since the separation of the offsets is greater.
12.9
(a) See spreadsheet. Note that the horizontal scales on the graphs will need to be adjusted by
hand in order to make them suitable for the parameters specified.
(b) For the given parameters we find
0,A+
14.00 Hz
0,A
26.00 Hz
0,B+
25.50 Hz
0,B
28.50 Hz
D+
12.54 Hz
5.59 Hz
39.50 Hz
54.50 Hz
0.410
1.107
AB part, X up
AB part, X down
frequency / Hz
intensity
frequency / Hz
intensity
11.0
0.301
22.0
0.053
16.0
0.699
27.0
0.947
23.5
0.699
27.5
0.947
28.5
0.301
32.5
0.053
X part
frequency / Hz
intensity
990.9
0.029
992.5
0.250
996.5
0.221
1003.5
0.221
1007.5
0.250
1009.1
0.029
115
0,B+
0,B
0,A
X up AB subspectrum
X down AB subspectrum
AB part
10
20
30
frequency / Hz
40
X part of ABX
980
985
990
995
1000
1005
1010
1015
frequency / Hz
1020
116
12.10
cd
e
AB part
X part
b
f
i
10
20
30
40
50 980
990
1000
1010
1020
frequency / Hz
line
frequency / Hz
line
frequency / Hz
a
b
c
d
e
f
g
h
12.3
18.1
19.3
21.2
25.1
28.2
32.4
39.4
i
j
k
l
m
n
988.4
991.5
997.3
1002.7
1008.5
1011.6
(a) By looking at the pattern of intensities and checking for the repeated spacing corresponding
to JAB we deduce that one subspectrum consists of lines b, e, g, h and other consists of lines
a, c, d, f.
(b) For the b, e, g, h subspectrum we determine the following (average) values:
JAB = 7.00 Hz
= 57.5 Hz
D = 14.3 Hz
B = 35.0 Hz
7.00
= 0.560
22.5 + 35.0
sin = 0.489
The intensities of the inner lines are 12 (1 + sin ) = 0.74, and the intensity of the outer lines are
1
2 (1 sin ) = 0.25. The frequencies of the four lines are
line
expression
frequency / Hz
intensity
1
2
(+D JAB )
1
2
0.74
1
2
(+D + JAB )
1
2
0.25
1
2
(D JAB )
1
2
0.25
1
2
(D + JAB )
1
2
0.75
117
= 40.45 Hz
D = 8.90 Hz
B = 22.97 Hz
7.00
= 1.273
17.48 + 22.97
sin = 0.7865
The intensities of the inner lines are 21 (1 + sin ) = 0.89, and the intensity of the outer lines are
1
2 (1 sin ) = 0.11. The frequencies of the four lines are
line
expression
frequency / Hz
intensity
1
2
(+D JAB )
1
2
0.89
1
2
(+D + JAB )
1
2
0.11
1
2
(D JAB )
1
2
0.89
1
2
(D + JAB )
1
2
0.11
first possibility
second possibility
22.5
0,A+
0,A+
35.0
0,B+
0,B+
17.5
0,A
0,B
23.0
0,B
0,A
118
D+ =
JAB
7.0
=
= 0.56
0,A+ 0,B+ 22.5 + 35.0
JAB
7.0
= 1.27
tan =
=
0,A 0,B 17.5 + 23.0
tan + =
+ = 0.5105
= 0.905
In the calculation of there are no complications since both JAB and (0,A 0,B ) are positive,
placing the angle in the top-right quadrant.
The intensity of both the X2 and X3 transitions are
2 1
1
1
cos
4
2
2
The intensity of both the X5 and X6 transitions are
2 1
2
1
1
(0.5 0.5105 0.5 0.905) = 0.0096
4 sin 2 + 2 = 0.25 sin
We assume 0,X = 1000 Hz, and so can determine the line positions as
transition
frequency
Hz
intensity
line
X1
1008.5
0.25
X2
0,X + (+D+ D )
1002.7
0.24
X3
0,X + 12 (D+ + D )
997.3
0.24
X4
0,X +
991.5
0.25
X5
0,X + 21 (D+ D )
988.4
0.0096
X6
0,X + (+D+ + D )
1011.6
0.0096
1
2
1
2 JAX
1
2
1
2 JBX
The line positions and intensities are a good match to the X part of the spectrum: the
assignment is listed in the right-most column of the table.
119
q
2
0,A+ 0,B+ 2 + JAB
= (22.5 (35.0))2 + 7.02 = 14.33 Hz
q
q
2
D =
0,A 0,B 2 + JAB
= (23.0 (17.5))2 + 7.02 = 8.90 Hz
D+ =
JAB
7.0
=
= 0.56
+ = 0.5105
0,A+ 0,B+ 22.5 + 35.0
7.0
JAB
=
= 1.27
= 2.24
tan =
0,A 0,B 23.0 + 17.5
tan + =
In the calculation of JAB is positive but (0,A 0,B ) is negative, placing the angle in the
top-left quadrant (see Fig. 12.19 on page 470), so the angle must be between /2 and .
The intensity of both the X2 and X3 transitions are
2 1
2
1
1
(0.5 0.5105 0.5 2.24) = 0.105
4 cos 2 + 2 = 0.25 cos
The intensity of both the X5 and X6 transitions are
2 1
1
1
sin
4
2
2
We assume 0,X = 1000 Hz, and so can determine the line positions as
transition
frequency
X1
0,X
X2
0.105
X3
0.105
X4
0.25
X5
0.145
X6
0.145
1
2 JAX
1
2 JBX
Hz
intensity
1008.5
0.25
1
2
991.5
1
2
The frequencies are exactly the same, but the pattern of intensities is quite different, and
certainly does not match the experimental spectrum. We therefore reject the second set of
parameters.
In conclusion, therefore, the determined parameters are
0,A = 20.0 Hz
0,B = 29.0 Hz
JAX = 5.0 Hz
JBX = 12 Hz
|JAB | = 7.00 Hz
We do not know the sign of the AB coupling, but we do know that the AX and BX
couplings have the same sign (either both positive or both negative, we do not know which).
120
12.11
If 0,A + 75 0,B + 7.5, then the X up subspectrum shows strong coupling. Rearranging this
condition gives 0,A 0,B 67.5 Hz.
Using this condition, in the X down sub-spectrum we have
0,A 0,B
=
=
0,A 75 0,B 7.5
0,A 0,B
| {z }
67.5
67.5 67.5
135 Hz.
What this means is that when there is very strong coupling in the X up subspectrum, the two
effective shifts in the X down subspectrum are still separated by 135 Hz, and so will not be
very strongly coupled at all.
Put another way
+ = 0,A+ 0,B+
= 0,A 0,B
Thus the differences in the two effective Larmor frequencies in the sub spectra, + and ,
themselves differ by + = (JAX JBX ). Since JAX is quite large, when we compare the
difference in the effective Larmor frequencies in one sub spectrum with that in the other, the
change can be substantial.
(b) For there to be infinite strong coupling in the X up subspectrum we need
0,A+ 0,B+
= 0
=
0,A 0,B
67.5 Hz.
Given that, at 500 MHz, 1 ppm 500 Hz, if follows that A B = 0.135 ppm.
For the X down sub spectrum the calculation is the same apart from a minus sign in front of
the coupling terms so the strong coupling condition is A B = +0.135 ppm.
(c) The degree of strong coupling, and hence the spectrum, is invariant to the sign of the
AB coupling. However, if the sign of the BX coupling is reversed, the effective Larmor
frequencies are changed. Assuming that JBX = 15 Hz, the condition for infinite strong
coupling in the X up subspectrum is
0,A+ 0,B+ =
=
0
0
0,A 0,B
82.5 Hz.
The shift difference is thus 0.165 ppm, a different value from that given above.
121
(d) In an AB spectrum the degree of strong coupling depends on the difference in the Larmor
frequencies of the two spins 0,A 0,B . If the magnitude of this difference increases, the
degree of strong coupling decreases. As the applied magnetic field is increased, the Larmor
frequencies will scale directly and as a result |0,A 0,B | will increase and the degree of strong
coupling will decrease.
In the ABX spectrum the degree of strong coupling, for example in the X up subspectrum,
depends on
+ = 0,A+ 0,B+ = 0,A 0,B + 21 (JAX JBX ) .
Let us suppose that JAX and JBX and both positive, and that JAX >> JBX .
Imagine that the chemical shifts of A and B are such that 0,A 0,B is positive. As the applied
field is increased this difference increases, thus + increases and the degree of strong coupling
decreases.
Now imagine that the chemical shifts of A and B are such that 0,A 0,B is negative.
Let us imagine starting at very low field so that 0,A 0,B is smaller in magnitude than
+ 21 (JAX JBX ). As the applied field is increased 0,A 0,B becomes more negative and, as a
result, + decreases. Consequently, increasing the field strength at first increases the degree of
strong coupling.
frequency
Eventually + goes to zero, which is infinite strong coupling. A further increase in the applied
field then makes + more and more negative, thus decreasing the strength of the coupling.
The diagram below may help.
1/2(JAX
JBX)
strong coupling
decreases
0
applied field
strong coupling
increases
(0,A 0,B)
The point here is that infinite strong coupling in one of the AB sub spectra occurs when the
difference in Larmor frequencies between A and B is a specific value, determined by the values
of JAX and JAX . As the applied field is increased we may move away from this condition, thus
decreasing the degree of strong coupling, or move towards it, thus increasing the degree of
strong coupling.
122
13
How the spectrometer works
13.1
The magnetic field strength can be computed from the given Larmor frequency, f0 , and gyromagnetic
ratio using 2 f0 = B0 . Hence
B0 =
2 f0 2 180 106
= 10.47 T.
=
1.08 108
A homogeneity of one part in 108 means that the magnetic field varies by B = 108 10.47 =
1.047 107 T. This translates to a variation in frequency, f , of
f =
This is significantly less than the expected linewidth of 25 Hz, so the magnet is useable.
The calculation is much simpler if we realise that a homogeneity of 1 part in 108 means that the
Larmor frequency will vary by 108 times its nominal value i.e.
f = 108 180 106 = 1.8 Hz.
13.2
=
= 1.27 105 rad s1 .
t180 24.8 106
2
= 20.1 dB .
20.2
124
13.3
13.4
The output of a two-bit ADC is two binary digits which are capable of representing the numbers
00, 01, 10 and 11 i.e. just four levels.
11
10
01
00
Note how the data points, because they are constrained to correspond to one of the four levels, are
not a particularly good representation of the smooth curve.
Having a larger number of bits means that there are more possible output levels, and hence the
digital representation of the signal will be more precise. As a result, the digitization sidebands are
reduced.
13.5
15 ppm at 800 MHz is 15 800 = 12 000 Hz. The range of frequencies, assuming that the receiver
reference frequency is placed in the middle, is thus 6 000 Hz to +6 000 Hz. From section 13.5.2 on
page 490, the sampling interval, , is given by
=
1
1
=
= 83.3 s .
2 fmax 2 6 000