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Chapter 4

Molecular Computations of Adsorption


in Nanoporous Materials
Ravichandar Babarao and Jianwen Jiang

Abstract Adsorption lies at the heart of many industrially important applications


such as purification, separation, ion exchange, and catalysis. As the number of
nanoporous materials synthesized to date is extremely large, rationally choosing
a high-performance material from discovery to specific application is a substantial challenge. Computational approaches at the molecular scale can provide microscopic insight into adsorption behavior from the bottom-up, complement and secure
correct interpretation of experimental results, and are imperative to new material
design and advanced technological innovation. We review the recent computational
studies of adsorption in nanoporous materials with a wide variety of building blocks
and physical topologies, ranging from zeolites, carbonaceous materials to hybrid
frameworks.

4.1 Introduction
Nanoporous materials play a pivotal role in many engineering processes and industrial applications, for instance, the separation of impurities from natural gas to
improve energy efficiency, the catalytic cracking of hydrocarbons, and the removal
of toxic heavy metals from wastewater [1]. An overwhelmingly large number of
porous materials have been and are being synthesized and characterized in the laboratory; consequently, theoretical guidelines are highly desired to properly choose
a material for specific use. Due to the spatial confinement and surface interactions, fluids in nanodomain behave significantly different from bulk phases. A clear
mechanistic understanding of fluid behavior in nanoporous materials is not only
of fundamental interest but also of central importance for practical use. In the past,
analytical approaches like density-functional theory (DFT) based on the advances in
J. Jiang (B)
Department of Chemical and Biomolecular Engineering, National University of Singapore,
Singapore 117576, Singapore
e-mail: chejj@nus.edu.sg
L.J. Dunne, G. Manos (eds.), Adsorption and Phase Behaviour in Nanochannels
and Nanotubes, DOI 10.1007/978-90-481-2481-7_4,

C Springer Science+Business Media B.V. 2010

69

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R. Babarao and J. Jiang

statistical mechanics have been developed to examine the equilibrium properties of


fluids in simple slit-like and cylindrical pores [24]. With an appropriate weighting
function, DFT can accurately predict the density profiles, isotherms, configurations,
layerings, etc. [57]. However, the extension of DFT to three-dimensional complex
geometries is formidable. With ever-growing computational power, the state-of-theart molecular simulation has increasingly become a versatile tool to investigate the
underlying properties of fluids confined in porous materials [8]. Simulation provides
microscopic insight from the bottom-up that is otherwise experimentally inaccessible or difficult, if not impossible. In addition, simulation can be used to complement and secure fundamental interpretation of experimental results and establish
the structurefunction relations based on molecular description. Therefore, molecular simulation is indispensable in the rational design of novel materials of increasing
complexity for new applications.
In this chapter, we review the recent simulation studies of adsorption in zeolites, carbonaceous structures, and hybrid organicinorganic frameworks. They represent three classes of fascinating nanoporous materials that are being widely used
in chemical industries and/or exhibit unique properties for emerging applications.
Experimental studies of adsorption in these materials have been comprehensively
addressed; however, simulation studies are relatively less. Due to page limitation,
the technical details of simulation principles are not described here, which are well
documented elsewhere [9, 10]. Nevertheless, the commonly used simulation methods for adsorption in porous media are briefly introduced below.
Stochastic Monte Carlo (MC) instead of deterministic molecular dynamics (MD)
method is most frequently used for adsorption studies [11]. The reason is that
MD is not straightforward to simulate adsorption isotherm as a function of bulk
pressure, which is considered as one of the most important adsorption properties
because isotherm can be readily determined from experiment. MD motion mimics the natural behavior of molecules through Newtons equation of motion, that is,
molecules diffuse into a porous material before adsorption equilibrium is reached.
This is a slow process particularly for large molecules, such as alkanes and aromatics. In contrast, MC does not need to follow the natural pathway and thus
allows random trial move so that a successful move may correspond to a large
jump in phase space, thereby reaching equilibrium rapidly. Most MC simulation
studies of adsorption are carried out in canonical or grand-canonical ensemble. In
canonical ensemble, temperature, volume, and number of adsorbate molecules are
fixed. MC simulation in canonical ensemble is usually used to simulate the distribution and energetics of adsorption sites, isosteric heat, and Henrys constant. In
grand-canonical ensemble, temperature, volume, and chemical potential of adsorbate are fixed. Grand-canonical Monte Carlo (GCMC) simulation permits adsorbate
molecules to exchange between adsorbed phase and bulk fluid reservoir, and can
provide adsorption isotherm easily. To compare GCMC results with experimental
data, the chemical potential has to be converted into pressure using an equation
of state or additional simulation. Widely used to simulate phase equilibria, Gibbs
ensemble Monte Carlo (GEMC) method [12] has recently been used to simulate
adsorption at a given pressure. GEMC is performed in two microscopic cells, one

Molecular Computations of Adsorption in Nanoporous Materials

71

cell with the adsorbent and the other with the bulk fluid. At a given pressure, the
volume of the bulk fluid is allowed to change. The total number of molecules is
fixed, but molecules can be transferred from one cell to the other. In the studies
reviewed here, these simulation techniques have been used to elucidate adsorption
phenomena at the molecular level in zeolites, carbonaceous materials, and hybrid
frameworks.

4.2 Zeolites
Zeolites are three-dimensional crystalline aluminosilicate materials [13, 14]. The
primary building blocks in zeolites are tetrahedral oxides SiO4 and AlO4 that connect together via corner-sharing oxygen atoms to form well-defined open pores. The
pores are precisely uniform, which distinguishes zeolites from many other porous
materials. Figure 4.1 shows three typical structures: MFI, FAU, and LTA. Some zeolites are not stable upon removing nonframework species, and the stability varies
with topology and composition. Zeolites have been extensively used in industrial
applications such as molecular sieving, catalysis, and ion exchange. Progress till
2001 in the computation of thermodynamic properties of guest molecules in zeolites was reviewed [15].
(a)

(b)

(c)

Fig. 4.1 Zeolites: (a) MFI, (b) FAU, and (c) LTA. Color code: red, O; yellow, Si; pink, Al

4.2.1 Light Gases


N2 , O2 , and Ar in zeolites LTA, X-, and Y-FAU were studied using GCMC simulation; the predicted N2 /O2 selectivity in LTA was in accordance with experiment
[16]. With the appropriate force field parameters, experimentally determined isosteric heats of NH3 adsorption in MOR, MFI, and Y-FAU were reproduced by simulation [17]. Adsorption of CH4 and CF4 in silicalite was measured and simulated
as a function of phase composition, total pressure, and temperature; the simulated
isotherms and isosteric heats were in good agreement with experiments [18]. A hierarchical modeling approach combining atomistic and coarse-grained simulations

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was proposed to predict adsorption thermodynamics of single components and


binary mixtures in silicalite. The results agreed well with full atomistic simulation, but the hierarchical approach saved an order of magnitude of computational
effort [19]. Long-range corrections were evaluated for simulation of CH4 and SF6
in silicalite at 298 K. A consistent use of cutoff radius was shown to be more important than the inclusion or the neglect of long-range corrections to potential energy
[20]. Nonpolar (Ar and CH4 ) and quadrupolar gases (N2 and CO2 ) in pure siliceous
FAU were investigated both experimentally and theoretically at ambient temperature and high pressures [21]. A systematic simulation study was reported for H2
in 12 purely siliceous zeolites, in which the cell parameters and framework flexibility were allowed to vary upon progressive filling of gas molecules, and then the
maximum H2 adsorption capacity in each framework was examined [22]. CO2 and
N2 both as single component and as binary mixture were studied in MFI, ITQ-3,
and ITQ-7. The CO2 /N2 selectivity varies strongly with the crystal structure. Simulated binary adsorption agrees well with prediction by the ideal adsorbed solution
theory (IAST) based on single-component adsorption [23]. Thermodynamics and
siting of CO2 , CH4 , and their mixtures were studied in ITQ-1 which consists of
two independent pores of different geometry. At the three temperatures considered,
a preferential adsorption of CO2 over CH4 was found. The equilibrium selectivity
was distinctly higher in its sinusoidal channel pore system than in the large cavity system over a wide range of pressures starting from the Henry law regime. A
maximum in selectivity was observed at low temperature, high pressure, and CH4 rich gas-phase composition [24]. H2 O adsorption in X- and Y-FAU as well as in
silicalite was computed. The isotherms and heats of adsorption were in good agreement with available experiments. The existence of cyclic H2 O hexamers located in
the 12-ring windows of NaX, recently disclosed by neutron diffraction experiments,
was observed [25]. A joint experimental and simulation study of H2 O adsorption
in silicalite was reported. The simulation qualitatively reproduced experimentally
observed condensation thermodynamic features. A shift and a rounding in the condensation transition were found with an increasing hydrophilicity of the local defect,
but the condensation transition was observed above the saturation pressure of H2 O
[26]. Simulation of H2 O in MFI by reducing the dipole moment of H2 O matched
well with the experimental isotherm at 300 K. The work suggests that the effective
intermolecular potential parameterized for bulk water is insufficient to describe the
ultraconfined water molecules [27].

4.2.2 Alkanes and Alkenes


With the development of configurational-bias Monte Carlo (CBMC) algorithm
[2830], adsorption of alkanes has been studied efficiently. Instead of inserting a
molecule at a random position, a molecule in CBMC is grown atom-by-atom biasing toward the energetically favorable configurations while avoiding overlap with
other atoms, and the bias is then removed by adjusting the acceptance rules [10].
Using the united-atom (UA) model for alkanes, Smit et al. observed an inflection

Molecular Computations of Adsorption in Nanoporous Materials

73

in the adsorption isotherms of n-hexane and n-heptane in MFI, but not of shorter
or longer alkanes. This inflection was attributed to the commensurate freezing
effect as the size of the zigzag channel in MFI is commensurate with the size of
n-hexane and n-heptane [31, 32]. Apart from MFI, alkanes were also simulated in
other zeolites such as FER, MTW, TON, and DON using the same force field as for
MFI and good agreement with experiments was found [33]. Linear alkanes ranging in length from C2 to C7 in AlPO4 -11 were examined and the isosteric heats
at infinite dilution matched well with experimental data [34]. The UA model was
also used to study adsorption of alkenes and their mixtures in silicalite-1, theta-1,
and deca-dodecasil. For C3 H6 /C3 H8 mixture in Na-LTA, adsorption isotherm from
simulation agrees well with experimentally measured results in cation-free LTA,
but not in Na+ -exchanged LTA [35, 36]. The anisotropic united-atom (AUA) potential for hydrocarbons was adopted to calculate the adsorption isotherms of linear
and branched alkanes in MFI; good agreement was observed with experiments and
other simulation results [37]. Also, with the AUA potential, adsorption isotherms of
pure alkenes and alkane/alkene mixtures in MFI were found to be closely consistent with experimental results [38]. Adsorption of n-pentane and n-hexane in FER
showed that the prediction of UA potential is inconsistent with experiment, whereas
the AUA potential can reproduce the subtle change in adsorption site occupancies
of n-alkanes (n = 37) [39]. Simulation isotherms of cycloalkanes like cyclopentane, -hexane, and -heptane in MFI reproduced most features in experiments and
revealed an inflection for cyclopentane but not for cyclohexane [40]. Comparing
measured and simulated adsorption properties, a decrease in the Gibbs free energy
of formation and adsorption was observed. Based on this observation, the selective
production and adsorption of the most compact, branched paraffins in n-hexadecane
hydroconversion in molecular sieves with pore diameters of ~0. 75 nm was satisfactorily elucidated [41]. Krishna et al. screened different zeolites for the separation of
CH4 /CO2 mixture and of hexane isomers. The linear n-hexane has a longer footprint and occupies a longer segment in the zeolite channel; 2,2-dimethylbutane is
the most compact isomer and has the smallest footprint. Consequently, a greater
number of 2,2-dimethylbutane molecules were observed to be located within the
MOR channels, in which the length entropy effect dictates [42, 43].

4.2.3 Aromatics
Adsorption of aromatic molecules that fit tightly into zeolite frameworks has been
investigated by simulations. Different guesthost force fields including all-atom,
UA, and AUA models were used to simulate the adsorption of benzene, xylene,
and cyclohexane. The force field considerably affects the locations of benzene and
cyclohexane. This suggests that care should be taken in choosing the force field, particularly when the guesthost ratio is near the value defined for the levitation effect
[44]. Benzene adsorption in different ORTHO silicalite structures was analyzed to
determine the origin of a surprising factor of 3.1 difference in Henrys constants.
The results indicate that a slight change in the lattice oxygen atom positions can

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R. Babarao and J. Jiang

reposition the sorbates enough to sizably affect the electrostatics. The small shifts
are magnified by the partial cancellation of large electrostatic terms on the hydrogen
and carbon atoms [45]. Binary adsorption was simulated in silicate for benzene/CH4
and benzene/cyclohexane mixtures. Benzene and cyclohexane display preferred siting in the channel intersections, while CH4 adsorbs preferentially in the channels. In
benzene/cyclohexane mixture, cyclohexane adsorbs in the intersections and benzene
is pushed to the zigzag channels [46]. Adsorption in silicalite from binary mixtures
of p-xylene, m-xylene, and toluene was investigated using simulation. Experimental
isotherms can be well reproduced if MFI is modeled in the para form, but not in
the native ortho form. This reveals that zeolite structure undergoes a transition from
ortho to para in the presence of aromatic molecules [47]. Using a nine-site model
for benzene, adsorption isotherms of benzene, propene, and their mixture in zeolites MOR, FAU, BEA, MFI, and MCM-22 were computed and in excellent accordance with measured results [48]. Benzene and benzene/thiophene mixtures were
studied in FAU, MFI, MOR, and Na-FAU using energy-biased GCMC, and the calculated isotherms and heats in Na-FAU were consistent with experiments [49, 50].
Adsorption properties of xylenes in X- and Y-FAU were reproduced by simulation
using a potential derived from Pellenq and Nicholson scheme. m-Xylene was found
to be adsorbed preferentially and the p-xylene/m-xylene selectivity predicted from
simulation was in good agreement with experiment [5153]. Preferential adsorption of o-xylene over p-xylene in AlPO4 -11 was predicted by simulations, agreeing
with experimental data. The selective adsorption comes from the smaller length of
o-xylene along the crystallographic c-axis in AlPO4 -11 compared to p-xylene, different from the case in AlPO4 -5 and AlPO4 -8 [54].

4.2.4 Cation-Exchanged Zeolites


A large number of simulation studies have been reported for adsorption in cationexchanged zeolites. Isotherms of H2 adsorption in Na-, Ni-, and Rh-exchanged XFAU were calculated at different temperatures and compared with measured data
[55]. Adsorption of alkanes in two different Na-MOR zeolites from simulation was
found to agree with experiment with the adequate inclusion of cations and realistic
charges in Al atoms [56]. CH4 , C2 H6 , and C3 H8 in Na-exchanged MFI and MOR
were simulated. The predicted positions of nonframework Na+ cations are in agreement with those determined by X-ray diffraction and so are the computed isotherms
and Henrys constants. Adsorption of alkanes is largely influenced by the position
and the density of nonframework ions [57]. For a given type of cation, adsorption
of alkanes in ZSM-5 was found to increase with decreasing density of the nonframework cations; for a given Si/Al ratio, adsorption increases with decreasing
atomic weight of the cation [58]. Isotherm and enthalpy of N2 adsorption in X-FAU
were simulated at ambient temperature, and qualitative agreement was observed
with experiments for a series of monovalent and divalent cations [59]. Adsorption
of CH4 in X- and Y-FAU was investigated using a newly derived force field in which
the Lennard-Jones parameters between CH4 and FAU were obtained by fitting the

Molecular Computations of Adsorption in Nanoporous Materials

75

potential energies from ab initio cluster calculations. The calculated isotherms and
enthalpies were in good agreement with those experimentally obtained [60]. Redistribution of nonframework cations was observed to occur upon adsorption of water
and aromatics in NaY, and in turn the selectivity of p-xylene over m-xylene was
enhanced by a fact of 4 [61].
Single- and binary-component adsorption of CO2 , N2 , and H2 in dehydrated
Na-4A was examined, and the strong selectivity for CO2 over both N2 and H2
was observed and also compared with that in MFI [62]. Supercritical CO2 adsorption in NaA and NaX was studied using GEMC, and the adsorption isotherms and
enthalpies were discussed in detail and compared with available measured data [63].
Combining experimental and simulation techniques, adsorption of N2 , O2 , and Ar
in Mn-exchanged zeolite-A and -X was studied. It was observed that the selectivity
of O2 over Ar was higher in both zeolite-A and -X [64]. Ar, N2 , and O2 in Naand Ca-exchanged LTA were studied both experimentally and theoretically. The
predicted isotherms match well with measured data and the extent of adsorption
increases with increasing Ca ions in LTA [65]. Selectivity of CO2 over N2 in flue
gas was found to rise remarkably in Na-ZSM-5, particularly at low pressures. This
is because CO2 has a large quadrupolar moment and its adsorption is enhanced due
to the electric field of cations [66]. Adsorption and enthalpy of CO2 in various types
of FAU including purely siliceous DAY, NaY, and NaLSX were simulated. Typical
arrangements of CO2 molecules were identified from low to high pressures [67].
Figure 4.2 shows that Na+ ions interact with a few CO2 molecules at a low pressure.
With increasing pressure, Na+ ions are more and more solvated by the surrounding CO2 molecules. Consequently, CO2 /NaY interaction slightly decreases due to
the solvation process, whereas CO2 /CO2 interaction increases. The combination of
these two contributions leads to a relatively constant value of adsorption enthalpy as
pressure rises [67]. CO2 adsorption was further simulated in LiY and NaY at various temperatures with Li+ CO2 interaction derived from ab initio calculations. The
results revealed two different types of adsorption behavior in NaY and LiY at 323
and 373 K, respectively [68].
Table 4.1 summarizes the simulation studies of adsorption for a wide variety of
guest molecules in different zeolites.

Fig. 4.2 Typical arrangements of CO2 molecules in NaY at (a) 0.1 bar, (b) 1 bar, and (c) 25 bar.
Na+ cations are represented in green, and the typical distances of NaOz and OOz are in .
Reproduced with permission from [67]. Copyright (2005) American Chemical Society

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R. Babarao and J. Jiang


Table 4.1 Simulation studies of adsorption in zeolites

Guests

MFI

X-FAU

Y-FAU

Other zeolites

Computed
quantities

Rare gases
N2

[6976]
[74, 90]

[16, 7880]
[16, 78]

[8189]
[16, 77]

P, I, Q, K, S
P, I, Q, K, S

O2

[90]

[16, 77, 78]


[16, 78,
9193]
[16, 78,
9193]
[92]
[78]

CO
CO2
SF6
NH3
H2 O
Methane

Ethane
Propane
n-Butane
i-Butane
n-pentane
n-Hexane
Cyclohexane
n-Heptane

[94]
[76]
[17]
[26, 95]
[31, 70, 76, 90,
98101]

n-Octane
n-Nonane

[109, 110, 118]

n-Decane

[109112, 118]

Ethane/butane [106]
CF4
[76]
CF3 Cl
CF2 Cl2
CFCl3
CHF3
CHCl3
Isopropylamine
Acetonitrile
Benzene
[45, 125, 126]
o-Xylene
m-Xylene
p-Xylene

[125]

P, I, Q, K, S

[78]
[17]
[96]
[80]

[31, 32, 105,


106]
[31, 32, 105]
[32, 105,
109113]
[111, 114, 115]
[105, 109, 110,
116]
[32, 105, 109,
110, 114, 116]
[32, 105,
109111, 114,
116]
[109, 110, 118]

[16, 78]

[17]
[96, 97]
[76, 81, 83, 84,
86, 88, 98,
102104]
[103]

[103, 107, 108]


[87, 109, 110] [87, 103,
107110]
[109, 110]

[103, 107110]

P, I, Q, K, S
P, I, Q, K, S
P, I, Q, K, S
P, I, Q, K, S
P, I, Q, K, S

[87, 109, 110] [87, 107110,


114]
[117]
[87, 109, 110] [87, 107110,
114]

P, I, Q, K, S

[109, 110,
118]
[109, 110,
118]
[109, 110,
118]

[109, 110, 118]

P, I, Q, K, S

[109, 110, 118]

P, I, Q, K, S

[109, 110, 118]

P, I, Q, K, S

[119]
[76]

P, I, S
P, I, Q, S
P, Q, S
P, Q, S
P, Q, S
P, Q, S
P, Q, S
Q, S
P, S
P, I, Q, K, S
P, S
P, I, Q, S

[122]
[17]

[120]
[120]
[120, 121]
[120]
[120]
[122, 123]
[17]

[122, 127]

[127, 128]

[53]

[51, 52, 80,


128, 129]
[51, 52, 80,
128, 129]

[17]
[124]
[54, 128]

[53]

P, I, Q, K, S
P, I, Q, K, S
P, I, Q, K, S
Q, S
P, I, Q, K, S
P, I, Q, K, S

[54]

P, I, Q, K, S
P, I, Q, K, S

P, I, Q, S

Molecular Computations of Adsorption in Nanoporous Materials

77

Table 4.1 (continued)


Guests
Other alkylbenzenes
m-Dinitrobenzene
Phenol
Pyridine

MFI

X-FAU

Y-FAU

Other zeolites

Computed
quantities

[17]

P, I, Q, K, S
P, S
P, I, Q, K, S
Q, S

[130]
[126]
[17]

[17]

P : interaction energy, I: adsorption isotherm, Q: heat of adsorption, K: Henrys constant, S: structure of adsorbed phase.

4.3 Carbonaceous Materials


Carbon atoms can possess different extents of aromatic sp2 or aliphatic sp3
hybridization and have different bonding and ring structures. As a consequence,
there are several stable carbon forms ranging from naturally occurring bulk structures such as graphite, diamond, activated carbons [131] to discrete structures such
as fullerenes and nanotubes [132]. Among these, activated carbons and nanotubes
have been extensively studied as adsorbents for gas purification and separation.

4.3.1 Activated Carbons


Activated carbon is a synthetic carbonaceous material, constructed by thermal
decomposition and activation at elevated temperature. Activated carbon consists
of elementary graphitic crystallites and amorphous structures. In many theoretical
studies, the simplified carbon slit-like pores have been used to mimic activated carbons. Simulation of pure and mixed CH4 and CO2 adsorption in slit pores gave
results close to the measured data in A35/4 activated carbon [133]. CO2 /CH4 /N2
mixtures in slit pores showed that CO2 is preferentially adsorbed and the simulation results are consistent with the predictions from DFT at various temperatures
and pressures [134]. Adsorption of alkanes in slit pores was studied over a wide
range of temperature, pressure, alkane chain length, and slit width to evaluate their
effects. The behavior of long alkanes at high temperatures was found to be similar
to short alkanes at lower temperatures [135]. The performance of 1- and 5-site models of CH4 adsorption in slit pores was evaluated. Although the two models yield
comparable pore densities, the number of particles predicted by the 1-site model
is always greater, regardless of whether temperature is subcritical or supercritical
[136]. Adsorption and desorption of H2 O in a platelet model for activated carbon
were simulated. The model included the effects of structural disorder which are
missing in the slit pore model. Hysteresis observed was in good agreement with
experimental results [137]. Simulation of pentane isomers and their ternary mixtures
in a series of carbon nanoslits demonstrated competitive adsorption. With decreasing slit width, first shape selective adsorption occurs due to the configurational

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entropy effect, followed by inverse-shape selective adsorption that occurs due to


the area entropy effect, and finally no adsorption occurs [138]. Using hypothetical C168 schwarzite to represent an amorphous nanoporous carbon, N2 , O2 , and
their mixtures were investigated by GCMC and GEMC simulations [139, 140]. In
addition to six-member rings, C168 schwarzite has some seven-member rings rather
than five-member rings as in buckyball C60 . The curvatures of C168 and amorphous
nanoporous carbon are similar; therefore, C168 may provide a similar environment
for adsorbates as that found in real samples. The predictions of mixture adsorption
using IAST based solely on the adsorption of pure gases agree well with simulation results. The energetic effect, by itself, cannot explain the large difference in the
permeation rates of O2 and N2 observed experimentally. The entropic effect, which
arises due to the size difference, is the dominant factor for the large selectivity favoring O2 over N2 [141].

4.3.2 Carbon Nanotubes


A carbon nanotube (CNT) can be envisaged as a cylinder rolled from a graphene
sheet and exists in three types, namely armchair, zigzag, and chiral. In 1991, Iijima
discovered the first CNT [142] and has ever since triggered extensive interest in
CNTs for a variety of applications. A number of earlier simulation studies were
carried out in CNTs for the adsorption of N2 , O2 , CO2 , Ar, Kr, Xe, CH4 , etc. The
adsorption isotherms of N2 [143], Xe [144], CH4 , and C2 H6 [145] were found to be
of type I regardless of temperature, inconsistent with experimentally observed type
II at subcritical temperatures. This is because the infinite periodic CNT bundles
were used in these simulations; however, real CNT samples have finite diameters.
As a result, the external surface of the finite CNT bundle was not included, which
is available for gas adsorption as evidenced experimentally by gas adsorption on
closed-ended CNTs.
A handful of simulations were carried out to examine the role of external surface
of CNT bundle on adsorption. Gas molecules were observed to form a quasi-onedimensional phase in the grooves at low pressures, whereas a three-stripe phase
parallel to the grooves at high pressures, followed by monolayer and bilayer phases.
The adsorption isotherms were predicted to be type II, consistent with experiment
[146148]. This suggests that the external surface must be accounted for to correctly
predict adsorption in CNTs. The role of external surface was thoroughly exploded
for N2 adsorption in two types of single-walled CNT bundles, as shown in Fig. 4.3
[149]. In the infinite periodic bundle, adsorption follows type I at both sub- and
supercritical temperatures and occurs inside CNTs, first at the annuli and then at the
centers. In the finite isolated bundle, adsorption follows type II at subcritical temperatures, as observed experimentally. Adsorption occurs first at the annuli and then
at the grooves. At high pressures, adsorption also occurs at the ridges surrounding
CNTs and at the centers, and on the external surface at still higher pressures. As
temperature increases from sub- to supercritical, adsorption in the finite isolated
bundle changes from type II to type I [149]. Adsorption of N2 and O2 mixture was

Molecular Computations of Adsorption in Nanoporous Materials

79

Fig. 4.3 Energy contours of a nitrogen atom along the xy plane in (a) periodic infinite bundle and
(b) isolated finite bundle. The vdW gap between CNTs is 3.2 . Adapted with permission from
[149]. Copyright (2003) American Physical Society

further studied in the two types of CNT bundles mentioned above. The selectivity
depends strongly on temperature but only weakly on the type of the bundle, and air
might be separated by competitive adsorption in CNT bundles [150].
Simulation of CO2 trapped in CNT bundles showed a sequential filling of adsorption sites in CNT with the interstitial sites preceding endohedral sites. The drastic
changes predicted from simulation in the binding energy distributions and density
profiles qualitatively explained the frequency shifting, broadening, and integrated
intensity changes in experimental infrared spectra [151]. Adsorption of an equimolar CO2 /CH4 mixture was determined in five CNTs with various diameters to investigate the effects of temperature, pressure, and pore size. The results revealed that
pressure and temperature have little effect, in contrast to the pore size [152]. CH4
adsorption was examined in triangular bundles of armchair CNTs with the vdW gap
varying from 0.335 to 1.0 nm. The results demonstrated that (15,15) CNT bundle
with the vdW gap of 0.8 nm is optimal for CH4 storage at 300 K [153]. Adsorption
and separation of linear and branched alkanes in CNTs were studied at room temperature. The results suggested the possible separation of alkane mixtures based on
difference in either size or configuration, as a consequence of competitive adsorption [154]. Shape and inverse-shape selectivity were observed for C5 isomers in
CNTs and the tube size was identified to be crucial as to which type of selective
adsorption might occur. In (7,7) CNT, inverse-shape selective adsorption occurs due
to the length entropy effect, whereas in large-size CNT, shape selective adsorption
occurs due to the configurational entropy effect [155].
Real CNT samples consist of heterogeneous rather than homogeneous bundle.
Shi and Johnson proposed an optimization method to construct a heterogeneous
CNT bundle with different diameters, as illustrated in Fig. 4.4. At low coverages,
simulated isosteric heats in the heterogeneous bundle were consistent with experimental data. In contrast, the isosteric heats in the homogeneous bundle were about
25% lower. Therefore, an accurate description of adsorption in CNT bundle must

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(a)

R. Babarao and J. Jiang

(b)

Fig. 4.4 (a) A heterogeneous CNT bundle. (b) Isosteric heat for Ar. Circles and triangles are
experiments, diamonds (squares) are simulations in the heterogeneous (homogeneous) bundles.
Reproduced with permission from [156]. Copyright (2003) American Physical Society

account for the heterogeneity [156]. Displacement of CO2 by Xe was simulated in


the heterogeneous bundle also. The spectral information constructed from simulation qualitatively reproduced experimental intensity. The good agreement between
simulation and experiment suggested that the adsorption sites associated with the
intensity peaks and changes upon Xe exposure are the consequence of CO2 being
displaced from the sites [157].

4.3.3 H2 Storage
High-capacity H2 storage is an essential prerequisite for the widespread deployment of next-generation fuel cells, particularly in portable devices and future automobiles. Considerable research has been undertaken over the past two decades to
determine H2 capacity in different carbon structures like activated carbons, carbon nanofibers, and CNTs. Experimental studies have been reviewed recently by
a few researchers [158161]. H2 storage in primitive, gyroid, diamond, CNT, and
quasi-periodic icosahedral nanoporous carbons was examined by simulation. None
of these satisfies storage target, except the quasi-periodic icosahedral nanoporous
carbon, which could accommodate 6 wt% H2 at 3.8 MPa and 77 K but the volumetric density does not exceed 24 kg/m3 [162]. It is clear from this work that the
geometry of carbon surface can enhance capacity only to a limited extent, and the
combination of most effective structure with appropriate additives should be incorporated to improve capacity. H2 adsorption in CNTs was simulated at 293 K and
77 K with an effective quantum potential derived from the FeynmanHibbs perturbative approach [163, 164]. The capacity at 298 K predicted by quantum simulation
is several percent smaller than that by classical simulation, and the quantum effect
contributes 1520% of adsorption amount at 77 K. Carbon nanohorn (CNH) is a

Molecular Computations of Adsorption in Nanoporous Materials

81

tube of typically 26 nm in diameter and 4050 nm long and has a conical cap at
one end. H2 isotopes in CNHs were simulated at 77 K, and the adsorption, incorporating quantum effect through the FeynmanHibbs potential, was predicted to be
in good agreement with experimental results [165]. This indicates that the quantum effect at 77 K is accurately represented by the FeynmanHibbs potential. The
effects of size, vdW gap, and CNT arrangement were investigated on H2 adsorption. Interestingly, it was observed that the size of CNT has significant influence
on the amount adsorbed inside CNT and distribution in the vicinity of CNT wall,
regardless of the type of CNT and vdW gap [166].
To enhance H2 storage capacity in CNTs, several approaches such as element
doping [167], incorporating defects, spilling over [168], changing the size and gap
of CNTs [166], introducing heteroatoms [169] as well as using silicon nanotubes
(SiNTs) [170] were proposed. Both N and B doping in single-walled CNTs decrease
H2 adsorption energy. The effect of alkali doping on H2 adsorption was simulated by
incorporating K or Li ions into CNT arrays. H2 capacity was found to be 3.95 wt%
with K doping and 4.21 wt% with Li doping, in fairly good agreement with the
experimental data determined at room temperature and 100 atm [171]. There is a
considerable increase in H2 binding energy by a factor of 50% in the presence of
structural defects in CNTs, which in turn enhances capacity [172]. H2 adsorption in
SiNTs was studied at 298 K over pressure range from 1 to 10 MPa. SiNTs exhibit
a stronger attraction to H2 both inside and outside the tube compared to the isodiameter CNTs; consequently, the capacity in SiNTs is enhanced [170]. Carbon nanoscroll (CNS) structure is formed by jelly roll-like wrapping of a graphene sheet.
H2 adsorption in CNSs was found to reach 5.5 wt% at 150 K and 1 MPa. Doping
alkali in CNSs leads to H2 capacity of 3 wt% at ambient temperature and pressure
[173, 174]. Recent analysis of thermodynamic constraints for H2 adsorption with a
focus on porous carbon suggested that an optimal adsorption enthalpy of 15 kJ/mol
is required to meet H2 storage target at room temperature. The enthalpy in most
carbon structures is about 46 kJ/mol, too weak to satisfy the desired goal for H2
storage at ambient temperature. Structural modification of carbon revealed the complex relationship between adsorption enthalpy, pore volume, and the amount of H2
stored. It was observed that increasing adsorption enthalpy might reduce storage as
well as delivery [175].
Numerous studies investigated the interaction of H2 with CNTs using quantum mechanics methods. Periodic DFT calculations of H2 chemisorption in CNTs
showed two chemisorption sites, one inside and the other outside. H2 capacity in
an empty space increases linearly with CNT diameter, and the maximum capacity
is limited by the repulsive energies between H2 molecules inside CNT and those
between H2 molecules and CNT wall [176]. Ab initio calculations in a cleaved cluster model revealed that boron nitride nanotubes are preferable to CNTs for H2 storage due to their heteropolar binding nature of their atoms. In addition, more efficient
binding energy can be achieved by increasing nanotube diameter or equivalently
decreasing the curvature [177]. H2 physisorption inside and outside achiral CNTs
was examined with the CNTs modeled as curved coronene-like (C24 H12 ) graphene
sheets. It was found that physisorption depends mainly on CNT diameter being

82

R. Babarao and J. Jiang

virtually independent of chirality [178]. Another commonly used method is the


two-level quantum mechanics/molecular mechanics (QM/MM) approach, in which
a system is divided into two different sections; the inner section is treated by a
high-level QM method and the outer section by MM method. With this method, H2
binding to the side of a (10,0) CNT was studied, in which B3LYP hybrid functional
was used for the accurate calculation of reaction sites, while the universal force field
(UFF) was used to describe the neighboring atoms [179]. This approach was also
applied to a (4,4) CNT with 200 atoms by treating 64 carbon atoms and 32 hydrogen atoms in the inner section with a high-level theory and the outer section with a
low-level theory. This study was focused on H2 coverage in CNT and the intercalation of H2 inside CNT [180]. Recently, Froudakis reviewed the existing theoretical
literature on H2 adsorption in CNTs, in which the importance of simulations for
understanding H2 adsorption mechanism and for improving storage capacity was
underlined, and the advantages and disadvantages of both statistical and quantum
mechanics modeling were discussed [181].

4.4 Hybrid Frameworks


Novel hybrid inorganicorganic porous materials have been recently developed,
most notably, the metalorganic frameworks (MOFs) synthesized by Yaghi and
coworkers [182]. The primary building blocks in MOFs (also known as coordination
networks or coordination polymers) are metal-oxide clusters and organic linkers.
MOFs possess extremely high porosities (up to 90%) and large surface areas (from
500 to 6500 m2 /g). The controllable length of organic linker and the variation of
metal oxide allow for tailoring the functionality, pore volume, and size over a wide
atomic-scale range, as shown in Fig. 4.5 [183]. In contrast to the spherical or slitshaped pores usually observed in carbon and zeolite materials, MOFs incorporate
crystallographically well-defined pores including squared, rectangular, triangular,
and window-connected cages. Therefore, MOFs provide a wealth of opportunities
for engineering new functional materials with tunable properties [184].

4.4.1 Light Gases


In conjunction with experiment, simulation was performed to investigate the porefilling mechanism of Ar in Cu-BTC. The results agreed quantitatively with experimental isotherm up to almost complete filling of the pore network [185]. Similarly,
the predicted positions and occupancies of Ar adsorption in IRMOF-1 were found
to match well with experiments [186]. Binding energies of Ar, N2 , O2 , CH4 , C2 H6 ,
and C3 H8 were computed separately. The most preferred site is near the metaloxide cluster in the cavity where the organic linker points outward, the second preferred site is where the linker points inward, and the least preferred site is above
and beneath the linker [186]. Adsorption of nonpolar gases like CH4 , N2 , and O2
was extensively studied in MOFs, particularly IRMOF-1. Different MOFs were

Molecular Computations of Adsorption in Nanoporous Materials

83

Fig. 4.5 IRMOF-n (n = 16) structures. Zn (blue polyhedra), O (red spheres), C (black spheres),
Br (green spheres in 2), amino groups (blue spheres in 3). The large yellow spheres represent
the largest vdW spheres that would fit into the cavities without touching the frameworks. Reproduced with permission from [183]. Copyright (2002) American Association for the Advancement
of Science

characterized for CH4 storage and compared with MCM-41, zeolites, and CNTs.
The complex interplay of various factors that affect CH4 adsorption was uncovered
and new, not yet synthesized, MOFs were proposed [187]. Adsorption of He, Ar, H2 ,
and CH4 was examined in various MOFs, including Cu-BTC, IRMOF-1, IRMOF6, IRMOF-8, IRMOF-14, MOF-2, MOF-3, and Cu-MMOM, and good agreement
was observed between simulations and experiments for a number of cases and very
poor agreement in other cases [188]. Simulation was performed on CH4 adsorption
in a series of MOFs. The accessible surface area and the free volume were found to
play a major role in adsorption at 298 K and moderate pressures [189]. From simulated adsorption isotherms of N2 , the BET surface areas of microporous MOFs were
found to agree very well with the accessible surface areas estimated in a geometric fashion directly from the experimental crystal structures. In addition, the surface
areas matched well with experimental reports in the literature. These results provide
a strong validation that BET theory can be used to obtain surface areas of MOFs
[190].
Mixture separation of CH4 and nC4 in IRMOFs was investigated to study the
influence of organic linkers. The predicted selectivity was as good as or better than
experimentally observed selectivity in other adsorbents, suggesting that IRMOFs
are promising for hydrocarbon separation [191]. Adsorption of a mixture of pentane isomers in IRMOF-1 was simulated. Each isomer exhibits increased extent
of adsorption with rising pressure, though there is less adsorption of the branched
isomer due to the configurational entropy effect. Compared to CNT bundle and MFI,

84

R. Babarao and J. Jiang

the adsorption selectivity in IRMOF-1 is smaller [192]. Gas mixtures containing


CO2 , CH4 , C2 H6 in Cu-BTC were studied, and it was observed that the selectivity
of CO2 over CH4 increases due to the electrostatic interaction between CO2 and
the framework [193]. Mixture adsorption of CO2 and CH4 , H2 simulated in CuBTC and IRMOF-1 showed that the geometry, the pore size, and the electrostatic
interaction in MOFs largely affect separation efficiency [194].

4.4.2 CO2 Storage


The combustion of fossil fuels such as coal and petroleum has generated a huge
amount of greenhouse gas CO2 . This has substantially led to severely adverse
impacts on environment like air pollution and global warming. One of the technically feasible approaches for CO2 sequestration is to use porous media, and CO2
storage in MOFs has been explored using molecular simulations. Adsorption in
three different types of materials silicalite, C168 schwarzite, and IRMOF-1
revealed that IRMOF-1 has the largest adsorption capacity for CO2 [195]. A different class of MOFs, based on the assembly of presynthesized molecular building
units, were produced and named as MIL (Material Institut Lavoisier) series. Simulation of CO2 in MIL-53 and MIL-47 confirmed that there is a structural interchange between large and narrow pore forms of MIL-53, but not in MIL-47 [196].
CO2 adsorption was simulated in IRMOF-1 at five different temperatures and in
IRMOF-3 and MOF-177 at 298 K. The results matched well with experimental data
and suggested that the attractive electrostatic interactions between CO2 molecules
are responsible for inflections and steps observed in the adsorption isotherms [197].
A computational study of CO2 storage was reported in MOFs with various linkers,
pore sizes, and topologies. The capacity was a complex interplay of these structural
properties, and the suitable pore size was found to be between 1.0 and 2.0 nm [198].
CO2 storage in a series of MOFs was simulated systematically and compared with
those in CNT and Na-exchanged ZSM-5 [199]. Figure 4.6 (left) shows the snapshot
for CO2 adsorption in IRMOF-1 and Fig. 4.6 (right) shows the adsorption isotherms
in different MOFs. The organic linkers play a critical role in tuning the free volume and accessible surface area, which largely determine the CO2 adsorption at
high pressures. As a combination of the high capacity and low framework density,
IRMOF-10, IRMOF-14, and UMCM-1 were identified to be the best among those
studied and even surpass the experimentally reported highest capacity in MOF-177.
The simulation showed that the larger the surface area and pore volume, the higher
the storage capacity achieved. Various factors like surface area, free volume, porosity, and framework density were found to correlate well with CO2 capacity near
saturation [199].

4.4.3 H2 Storage
H2 adsorption in MOFs has been extensively simulated toward the development of
new storage media. A study of H2 in IRMOF-1, IRMOF-8, and IRMOF-18 showed

Molecular Computations of Adsorption in Nanoporous Materials


IRMOF-1
Mg-IRMOF1
Be-IRMOF1
IRMOF1-(NH2)4
IRMOF10
IRMOF13
IRMOF14
UMCM-1

40
Nex(mmol/g)

85

30
20
10
0

1000

2000
3000
P(kPa)

4000

5000

Fig. 4.6 (left) Snapshot of CO2 adsorbed in IRMOF-1 at 300 K and 2000 kPa. (right) Excess
adsorption isotherms of CO2 in different MOFs versus bulk pressure. Reproduced with permission from [199]. Copyright (2008) American Chemical Society

that metal-oxide clusters are the preferential adsorption sites for H2 and the effect of
organic linkers becomes evident with increasing pressure [200]. Simulation of H2
in 10 noninterpenetrating MOFs revealed that H2 uptake correlates well with isosteric heat at low pressures and with the surface area and free volume at intermediate
and high pressures [201]. In interpenetrating MOFs, the small pores generated by
catenation play a primary role in densely confining H2 molecules so that the capacity is higher in interpenetrating frameworks than in noninterpenetrating frameworks
[202]. The interactions between H2 and MOFs were artificially increased in simulation to learn the degree to which the isosteric heat must be increased to meet
the current target for H2 storage. H2 density within the free volume of materials
provided a useful insight and yielded a graph for the required isosteric heat as a
function of the free volume to meet the storage target at room temperature and
120 bar [203].
A number of theoretical studies on the interactions between H2 and MOFs based
on quantum mechanics have been reported. Generally, metal-oxide sites bind H2
more strongly (78 kJ/mol) than do organic linkers (45 kJ/mol). But as the available volume of the metal-oxide sites is small, they tend to be saturated quickly, while
organic linkers play a more crucial role at higher pressures [204]. The stronger H2
binding observed at the metal-oxide sites can be attributed to the electrostatic and,
possibly, orbital donation interactions, while the vdW interactions dominate at the
organic linkers [205]. Several polar aromatic linkers of MOFs were examined to predict H2 binding using DFT theory, and the computed binding energies were in good
agreement with experiments [206]. With the approximate resolution of identity MP2
(RI-MP2) and triple-zeta valence basis set, H2 binding energies were calculated with
various substituted benzenes like C6 H6 , C6 H5 F, C6 H5 OH, C6 H5 NH2 , C6 H5 CH3 ,
and C6 H5 CN, in which the substituted benzenes were treated as simplified subunits of the organic linkers in MOFs. The interaction energy with C6 H5 NH2 was

86

R. Babarao and J. Jiang

found to be the strongest (4.5 kJ/mol) [207]. Similarly, the binding energies were
estimated by MP2 with the metal oxide and organic linker in IRMOF-1. GCMC
simulation identified a high-energy binding site at the corner that quickly saturated with 1.27 H2 molecules at 78 K, whereas a broad range of binding sites were
observed at 300 K [208]. Various IRMOFs such as IRMOF-1, IRMOF-3, IRMOF4NH2 , IRMOF-6, IRMOF-8, IRMOF-12, IRMOF-14, IRMOF-18, and IRMOF-993
were studied using RI-MP2. The highest binding energy was found in IRMOF4NH2 , even higher than in polybenzoid structures such as IRMOF-14 and IRMOF993 [209]. A significant enhancement of H2 uptake in Li-decorated IRMOF-1 was
revealed with 2.9 wt% at 200 K and 2.0 wt% at 300 K. Two Li atoms strongly adsorb
on the surfaces of six-carbon rings, one on each side. Each Li atom can cluster three
H2 molecules with a binding energy of 12 kJ/mol [210]. Using both DFT theory and
MP2 calculations, the interaction energies of H2 adsorption with benzenoid molecular linkers in MOFs were computed. Both the local-density and the generalizedgradient approximated DFT methods were inaccurate in predicting binding energy
but gave a qualitatively correct prediction [211]. A strong correlation was demonstrated between H2 surface density and coordinatively unsaturated metal centers
in MOFs. Quantum mechanical calculations were performed to estimate the shortest distance achievable between H2 molecules, thereby defining the surface area
requirements for MOFs that can reach the target for H2 storage [212].
Table 4.2 summarizes the simulation studies of adsorption for a wide variety of
guest molecules in different MOFs.

4.4.4 New Hybrid Frameworks


A recent breakthrough in the development of hybrid frameworks is the crystalline,
porous, covalent organic frameworks (COFs) [220223]. Solely synthesized from
light elements like B, C, O, and H, COFs consist of the organic linkers covalently
bonded with boron-oxide clusters and have high thermal stability, large surface area,
and porosity. These boron-oxide clusters can be regarded as analogous to the metaloxide clusters in MOFs. Composed of light elements, however, COFs have even
lower density than MOFs. Currently, very few simulation studies have been reported
for COFs. Adsorption isotherms of Ar, CH4 , and H2 in COF-102, -103, -105, and
-108 were simulated, in which COF-102 and COF-103 showed greater affinity for
CH4 due to the compact atomic structures [223]. CO2 storage in various 3D, 2D,
and 1D COFs structures was simulated, and exceptionally high capacity in COF-105
and -108 was observed. The gravimetric and volumetric capacities at 30 bar correlated well with various factors such as framework density, free volume, porosity,
and surface area [224]. Another breakthrough is the invention of zeolitic imidazolate frameworks (ZIFs) [225]. ZIFs have high thermal and chemical stability like
zeolites and also high porosity and pore functionality like MOFs. Similar to MOFs,
ZIFs showed promising storage and separation capacity [226, 227]. At the time of
preparing this chapter, we were not aware of any reported simulation work in ZIFs.

Molecular Computations of Adsorption in Nanoporous Materials

87

Table 4.2 Simulation studies of adsorption in MOFs


Computed
quantitiesb

References

P, I, S
P, I, Q, S
P, I, S
P, I, Q, K, S, A, F

[186, 188, 213]


[186, 214]
[214]
[193197, 199, 214, 215]

P, I, Q, K, S

[187, 191193, 195, 216]

P, I, Q, K, S
P, I, Q, K, S
P, I, Q, K, S

[192]
[192, 217]
[191, 192, 217]

P, I, Q, K, S
P, I
P, I
P, I
P, I
P, I, S
P, I, S
P, I, S
P, I, Q, S
P, I, S
P, I, S
P, I, S

[192]
[218]
[218]
[218]
[218]
[191]
[194]
[193, 195]
[214]
[192]
[192]
[219]

M1, M4

P, I, S

[219]

M1, M4

P, I, S

[219]

Guests

Hostsa

Ar
N2
O2
CO2

M1, Cu-BTC, MI
M1, Cu-BTC
Cu-BTC
M1-10, MOF-177,
Cu-BTC,
UMCM-1,MI, ML1,
ML2, ML3, ML4,
F-MOF1
M1, M3, M5, M6, M9,
M10, ML1, Cu-BTC,
CPL-2, CPL-5, MI,
CU1, CU2
M1
M1, MM1
M1, M5, M6, M7, M8,
MM1
M1
M1
M1
M1
M1
M1, M4, M5, M8, M9
M1, Cu-BTC
M1, Cu-BTC
Cu-BTC
M1
M1
M1, M4

Methane

Ethane
Propane
n-Butane
i-Butane
n-Pentane
n-Hexane
Cyclohexane
n-heptane
Methane/butane
CO2 /CH4 /H2
CO2 /CH4
CO2 /N2 /O2
C1 C5 alkanes
C5 isomers
n-Butane/2methylpropane
n-Pentane/2methylbutane
n-Hexane/2methylpentane

a M1: IRMOF-1, M2: IRMOF-3, M3: IRMOF-4, M4: IRMOF-6, M5: IRMOF-8, M6: IRMOF10, M7: IRMOF-11, M8: IRMOF-13, M9: IRMOF-14, M10: IRMOF-16, MI: manganese formate,
ML1: MIL-53, ML2: MIL-47, ML3: MIL-100, ML4: MIL-101, MM1: Cu (hfipbb) (H2 hfipbb),
CU1: Cu(SiF6 )(bpy)2 , CU2: Cu(GeF6 )(bpy)2 .
b I: adsorption isotherm, Q: heat of adsorption, K: Henrys constant, A: accessible surface area, F:
free volume, P: interaction energy, S: structure in adsorbed phase.

4.5 Outlook
We have reviewed the recent simulation studies of adsorption for a wide variety
of guest molecules in three important classes of nanoporous materials zeolites,
carbons, and hybrid frameworks. The contents reviewed are representative rather
than exhaustive. From simulations, useful adsorption properties, such as binding

88

R. Babarao and J. Jiang

sites, interaction energies, isosteric heats, isotherms, and separation factors, can be
obtained and compared with available experimental data. It is important to note that,
given a material, the accuracy of simulation is primarily determined by the guest
framework interactions [228]. In a large number of simulation studies, the empirical
force fields have been used. For example, classical Kiselev [78] and Steele [229]
potentials are commonly used for zeolites and carbon materials, respectively. For
MOFs, the universal [230] and Dreiding [231] force fields are often used. These
force fields were constructed by fitting to some experimental data over a limited
range of conditions with certain empirical rules. Their semiempirical nature may
lead to inaccurate predictions. A more rational way is to calculate guestframework
interactions from the first-principles methods. DFT has been widely used in solidstate materials; however, it fails to describe the weak physisorption interactions
because the dispersion forces are not properly accounted for in the DFT theory.
A major obstacle to calculate the guestframework interactions is that high-level
methods are usually required, but they are computationally very expensive, particularly for large structures. Consequently, cost-effective hierarchical approaches are
adopted as a compromise of accuracy and speed.
Most simulation studies on adsorption have used rigid frameworks. This allows
the use of grid-interpolation techniques to compute the interactions between guest
molecules and framework very efficiently. Such a simplified treatment is usually
acceptable but cannot reproduce structural changes that might occur upon adsorption. The effect of framework flexibility on hydrocarbon adsorption in silicalite was
examined. At low loadings, the effect is small but seems to be increasingly larger at
high loadings [232]. In contrast to the relatively rigid zeolitic and carbon structures,
adsorption in MOFs could easily cause structural transformation due to the existence of organic linkers. For example, a hysteresis was observed in a pillared-layer
MOF, which undergoes expansion and contraction (27.9% reduction in cell volume)
during adsorption and desorption [233]. However, most simulation studies scarcely
include the flexibility of MOFs. H2 O in IRMOF-1 examined by molecular dynamics simulation with a flexible force field revealed that IRMOF-1 is stable at very low
H2 O content but unstable upon exposed to 4% H2 O [234]. Exceptionally negative
thermal expansion in IRMOFs was explored and two competing effects were identified. One is a local effect where all bond lengths increase with temperature and
a long-range effect where the thermal movement of the linker molecules leads to a
shorter average distance between corners upon heating [235].
The review is focused mainly on adsorption. To further elucidate fluid behavior
in porous media, however, dynamic diffusion should be synergistically incorporated
[236]. Similar to adsorption, a wealth of simulation studies have been reported for
diffusion in various porous materials. Diffusion of CH4 , CO2 , and N2 in silicalite
was simulated over a wide range of occupancies and compared with experimental
data [237, 238]. Comparison of the self-diffusivities of CH4 /CF4 mixture in silicalite
was conducted between simulation and NMR experiment, and good agreement was
found [239]. A dynamically corrected transition-state theory was used in simulation to quantitatively compute the self-diffusivity of adsorbed molecules in confined
systems at nonzero loading [240]. Diffusion of various gases (He, Ne, Ar, Kr, H2 ,

Molecular Computations of Adsorption in Nanoporous Materials

89

N2 , CO2 , and CH4 ) was investigated in six all-silica zeolites MFI, AFI, FAU, CHA,
DDR, and LTA [241]. The self- and transport diffusivities of light gases like H2 ,
CH4 , Ar, and Ne were simulated in CNTs and in zeolites with comparable pore
sizes. It was found that diffusion in CNTs is 13 orders of magnitude faster [242,
243]. Mass transport of O2 , N2 , and their mixture in a CNT demonstrated that a
good kinetic selectivity could be achieved for air separation by carefully adjusting
the upstream and downstream pressures [244]. Self- and transport diffusions of light
gases in MOF-2, MOF-3, MOF-5, and Cu-BTC as a function of pore loading were
found to be in the same order of magnitude as in silicalite [245]. Simulation of benzene in IRMOF-1 revealed that the diffusion and the activation energy of benzene
are considerably smaller in a flexible framework compared to a rigid one [246]. Diffusion and separation of CO2 and CH4 in silicalite, C168 schwarzite, and IRMOF1 were examined. The predictions of self-, corrected-, and transport diffusivities
from the MaxwellStefan formulation match well with the simulation results [247].
A critical appraisal of current estimation methods was presented to predict binary
mixture diffusions in a large number of porous materials, including zeolites (MFI,
AFI, TON, FAU, CHA, DDR, MOR, and LTA), CNTs, titanosilicates (ETS-4), and
MOFs (IRMOF-1 and Cu-BTC) [248].
In summary, molecular simulations have substantially enhanced the current state
of knowledge for guest molecules in nanoporous materials. Fundamental insight has
been provided to bridge the large gap between microscopic and macroscopic properties in the nanodomain. On the basis of molecular description, structureproperty
and function relations can be developed toward high-efficacy material screening.
Molecular simulations thus facilitate and accelerate the intelligent design of new
porous materials with novel topological and compositional characteristics for industrially important applications.
Acknowledgments The authors are grateful for the support from National University of
Singapore (Grants R-279-000-198-112/133 and R-279-000-243-123).

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