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Chemical Biology Laboratory, Division of Organic Chemistry; bBiology Division, Indian Institute of Chemical
Technology, Hyderabad 500 067, India
Received October 10, 2008: Revised December 22, 2008: Accepted December 22, 2008
Abstract: A series of new coumarin linked naphthalimides (16a-g; 18a-g) was synthesised and evaluated for their in vitro
anticancer activity against six cancer cell lines. Most of the compounds investigated have shown good to moderate anticancer activity against colon, breast and lung cancer cell lines. Thermal denaturation studies indicated that some compounds exhibited DNA binding ability. They were also found to be active against gram-positive and gram-negative bacterial strains as well as a few fungal strains.
precursor in a number of cases. As an example, the naphthalimide linked pyrolobenzodiazepine hybrids 7-9 [23, 24],
have exhibited better anticancer activity against certain cancer cell lines and improved DNA binding affinity than their
precursor DC-81, a naturally occurring pyrolobenzodiazepine molecule used as a standard to measure DNA binding affinity.
Coumarin derivatives have been reported to possess various biological activities including antiviral [1], antitumour
[2-5], DNA-repair deficiencies [6, 7], anti-inflammation [812], antiallergic and antihaemorrhagic activities [13]. Amino
thaizolyl derivatives of coumarin have been reported to possess mild antimicrobial activity, which on further derivatisation with different moieties, have been reported to possess
significant antimicrobial 1 and anticancer activities 2, 3 [1419].
In the last few years, we have been engaged in the structural modifications for different pharmacophores as well as
the development of new synthetic strategies for the preparation of biologically important heterocycles, particularly antiR1
R1
O
O
N
X
X= H, Br
1
R3
R2
NHR
S
R
N
CH3
N
R2
C
R3
N
S
R
N
NH2
N
C
NH2
2
Biologically active coumarin-thiazole derivatives
Naphthalimides and its derivatives have a profound history in the field of medicinal chemistry and especially in the
area of anticancer drugs due to their mode and specificity of
interaction with particular DNA sequences, which has drawn
considerable interest in chemistry, biology and medicine.
Naphthalimide analogues have been reported as a potential
class of antineoplastic agents with compounds like amonafide (Quinomed, 4), mitonafide (5) and azonafide (6),
known to inhibit DNA and RNA synthesis, and intercalate
DNA [20-22]. Many naphthalimide linked conjugates have
also shown to exhibit superior anticancer activity than their
*Address correspondence to this author at the Chemical Biology Laboratory, Division of Organic Chemistry, Indian Institute of Chemical Technology, Hyderabad 500 067, India; Tel: +91-40-27193157; Fax: +91-4027193189; E-mail: ahmedkamal@iict.res.in
1570-1808/09 $55.00+.00
Kamal et al.
N
O
HCl
HCl
X
Amonafide, (4) X = NH2
Azonafide, (6)
O
N
BnO
H
N
n
O
H3CO
( )
N
H
O
H3CO
n=1-3,6,8
n=2,3
8
O
N
H
O
H3CO
N
H
N
O
R1
R1
O
OH
+
R2
O
OC2H5
CHO
(i)
R2
COCH3
R3
R3
11
10a-g
12a-g
(ii)
R1
R1
O
(iii)
N
R2
R3
R2
NH2
14a-g
14a : R1 = R2 = R3 = H
14b : R1 = OCH3 R2 = R3 = H
14c : R2 = Cl R1 = R3 = H
14d : R1= H R2 = R3= CHCH2CH2CH
14e : R1 = R2 = Cl R3 = H
14f : R2 = Br R1 = R3= H
14g : R1 = R2 = Br R3 = H
Scheme 1. Reagents and conditions: (i) Piperidine; (ii) Br2, CHCl3; (iii) CS(NH2)2, C2H5OH, reflux.
COCH2Br
R3
13a-g
O
O
R1
O
O
R2
R2
203
R2
NH2
R2
15
14a-g
N
S
16a-g
O
16a: R1 = R2 = R3 = H;
16b: R1 = OCH3 R2 = R3 = H;
16c: R2 = Cl R1 = R3 = H
16d: R1= H R2 = R3= CHCH2CH2CH;
16e: R1 = R2 = Cl R3 = H;
16f: R2 = Br R1 = R3= H;
16g: R1 = R2 = Br R3 = H
Antitumour Activity
The
precursors
of
3-(2-amino-4-thiazolyl)-2H-lbenzopyran-2-ones (14a-g) were reacted with naphthalic
anhydride 15 by heating both the reactants in methanol followed by the addition of aq. NaOH (10%) and the resulting
solutions were stirred overnight to yield the desired coumarin-naphthalimide conjugates 16a-g linked through the
thiazolyl ring, as illustrated in Scheme 2.
O
N
R2
R3
+
NH2
17
14a-g
R1
R1
O
O
N
R2
R3
S
O
O
18a-g
18a: R1 = R2 = R3 = H
18b: R1 = OCH3 R2 = R3 = H
18c: R2 = Cl R1 = R3 = H
18d: R1= H R2 = R3= CHCH2CH2CH
18e: R1 = R2 = Cl R3 = H
18f: R2 = Br R1 = R3= H
18g: R1 = R2 = Br R3 = H
R2
R3
Table 1.
Kamal et al.
Compd.
Colo205
PC3
-g
16a
SiHa
-g
-g
MCF7d
Zr-75-1d
A2780e
A549f
2.1
26
-g
29
29
27
16b
24.0
24
28.0
4.2
16c
-g
24
-g
0.17
-g
24
29
16e
2.28
26
31.0
2.1
2.1
29
0.19
16f
0.15
-g
16g
-g
-g
-g
2.0
24
25
-g
18a
23
28
27
0.16
21
0.1
26
18b
28
0.13
<0.1
-g
18c
24
26
-g
3.5
23
25
28
25
2.3
30
31
28
28.0
2.4
27
27
24
0.15
2.38
-g
<0.10
<0.10
0.002
13.0
18e
27.0
18f
18g
25.0
ADR
a
28.0
14.7
b
30.0
<0.10
c
1.9
d
Colon Cancer; Prostrate Cancer; Cervical Cancer; Breast Cancer; Ovarian Cancer; Non-Small-Cell Lung Cancer; IC50 value not attained at the concentrations used in the
assay; ADR, Adriamycin.
Compd.
[Compd.]:[DNA]
Molar Ratioa
0h
18 h
16a
1:5
1.0
1.2
16b
1:5
0.4
0.5
16c
1:5
1.0
1.0
16d
1:5
0.1
0.1
16e
1:5
3.8
3.8
16f
1:5
0.4
0.5
16g
1:5
0.3
0.7
18a
1:5
1.2
1.5
18b
1:5
0.9
1.1
18c
1:5
24.3
26.2
18d
1:5
4.5
4.5
18e
1:5
3.9
3.9
18f
1:5
0.1
0.3
18g
1:5
0.8
0.9
DC-81
1:5
0.3
0.7
For CT-DNA alone at pH 7.00 0.01, Tm = 69.2 C 0.01 (mean value from 10 separate determinations), all Tm values are 0.1 - 0.2 C.
b
For a 1:5 molar ratio of [Compd.]/[DNA], where CT-DNA concentration = 100 M and ligand concentration = 20 M in aqueous sodium phosphate buffer [10 mM sodium phosphate + 1 mM EDTA, pH 7.00 0.01].
a
Table 3.
205
Compd.
Gram-Positive
Gram-Negative
S. aureus
S. epidermidis
E. coli
P. aeruginosa
16a
37.5
37.5
18.75
75
16b
18.75
37.5
18.75
37.5
16c
18.75
18.75
18.75
37.5
16d
37.5
37.5
18.75
75
16e
18.75
18.75
18.75
37.5
16f
37.5
37.5
18.75
75
16g
37.5
37.5
18.75
75
18a
37.5
37.5
18.75
75
18b
18.75
37.5
18.75
37.5
18c
18.75
37.5
18.75
37.5
18d
37.5
18.75
18.75
75
18e
37.5
18.75
18.75
75
18f
37.5
37.5
18.75
37.5
18g
37.5
37.5
18.75
75
CIPR
18.75
18.75
18.75
37.5
CIPR: Ciprofloxacin.
Table 4.
Kamal et al.
Yeast
Filamantous Fungi
S. cerevisiae
C.albicans
A. niger
R. oryzae
16a
23
20
20
14
16b
18
18
21
22
16c
18
18
18
23
16d
15
16
18
15
16e
18
18
16
23
16f
23
16
19
14
16g
16
16
18
14
18a
16
16
18
12
18b
18
16
18
23
18c
23
23
20
23
18d
16
18
21
12
18e
16
17
21
12
18f
16
15
22
23
18g
16
18
20
13
CLTM
23
24
22
23
207
2-[4-(6,8-Dibromo-2-oxo-2H-3-chromenyl)-1,3-thiazol-2yl]-2,3-dihydro-1H-benzo[d,e]isoquinoline-1,3-dione (16e)
Yield 273 mg, 93%; Yellow solid; mp >300 oC; IR (KBr): 3056, 1772, 1732, 1368, 1209, 1097, 1104, 962, 638,
458 cm-1 ; 1H NMR (200 MHz, DMSO-d6): ppm 7.43 (s,
1H), 7.71-7.64 (m, 1H), 7.89 (s, 1H) 8.04 (d, J = 7.5 Hz,
2H), 8.32-8.41 (m, 2H), 8.51 (d, J = 7.2 Hz, 2H), 8.77 (s,
1H); MS (FAB): m/z 582 (M+); Anal. Calcd for
C24H10Br2N2O4S: C, 49.51; H, 1.73; N, 4.81; Found: C,
49.60; H, 1.71; N, 4.80%.
2-[4-(8-Methoxy-2-oxo-2H-3-chromenyl)-1,3-thiazol-2-yl]2,3-dihydro-1H-benzo[d,e]isoquinoline-1,3-dione (16f)
Yield 210 mg, 92%; Yellow solid; mp 202-203 oC; IR
(KBr): 3027, 2985, 1767, 1721, 1656, 1493, 1377, 1207,
1089, 939, 642 cm-1; 1H NMR (200 MHz, DMSO-d6): ppm
3.92 (s, 3H), 7.28 (d, J = 7.6 Hz, 2H), 7.69-7.61 (m, 2H),
7.93 (s, 1H), 8.06 (d, J = 7.4 Hz, 2H), 8.34-8.43 (m, 2H),
8.55 (d, J = 7.3 Hz, 2H), 8.79 (s, 1H); 13C NMR (75 MHz,
DMSO-d6): ppm 167.0, 158.3, 151.7, 150.7, 143.0, 136.7,
135.4, 132.5, 130.9, 128.5, 127.6, 127.2, 125.5, 121.3, 120.7,
117.7, 109.6, 55.9; MS (FAB): m/z 454 (M+); Anal. Calcd
for C25H14N2O5S: C, 66.07; H, 3.11; N, 6.16; Found: C,
66.03; H, 3.12; N, 6.10%.
2-[4-(3-Oxo-3H-benzo[f]chromenyl)-1,3-thiazol-2-yl]-2,3dihydro-1H-benzo[d,e]isoquinoline-1,3-dione (16g)
Yield 227 mg, 95%; Green solid; mp 262-263 oC; IR (KBr): 3083, 1774, 1726, 1624, 1555, 1209, 1099, 995, 783,
741 cm-1; 1H NMR (200 MHz, DMSO-d6): ppm 7.30-7.32
(m, 2H), 7.72-7.63 (m, 4H), 7.91 (s, 1H), 8.06 (d, J = 7.4 Hz,
2H), 8.32-8.41 (m, 2H), 8.51 (d, J = 6.5 Hz, 2H), 8.76 (s,
1H); MS (FAB): m/z 474 (M+); Anal. Calcd for
C28H14N2O4S: C, 70.88; H, 2.97; N, 5.90; Found: C, 70.60;
H, 2.95; N, 5.88%.
2,7-Di[4-(2-oxo-2H-3-chromenyl)-1,3-thiazol-2-yl]-1,2,3,6,
7,8-hexahydrobenzo[lmn][3,8]phenanthroline-1,3,6,8-tetraone (18a)
Yield 279 mg, 51%; Light green solid; mp 262-263 oC;
IR (KBr): 3087, 1793, 1731, 1627, 1478, 1343, 1084,
1001, 783, 711 cm-1; 1H NMR (200 MHz, DMSO-d6): ppm
7.31 (d, J = 6.3 Hz, 4H), 7.72-7.63 (m, 4H), 7.91 (s, 2H),
8.23 (s, 4H), 8.76 (s, 2H); 13C NMR (75 MHz, DMSO-d6):
ppm 169.0, 168.4, 168.2, 167.7, 141.3, 137.4, 136.6, 135.6,
131.6, 130.75, 130.41, 129.6, 125.4, 124.6, 121.9, 116.25,
115.5, 109.9; MS (FAB): m/z 721 (M+); Anal. Calcd for
C38H16N4O8S2: C, 63.33; H, 2.24; N, 7.77; Found: C, 63.28;
H, 2.20; N, 7.73%.
2,7-Di[5-(6-chloro-2-oxo-2H-3-chromenyl)-1,3-thiazol-2-yl]1,2,3,6,7,8-hexahydrobenzo[lmn][3,8]phenanthroline-1,3,
6,8-tetraone (18b)
Yield 317 mg, 54%; Yellow solid; mp 220-222 oC; IR
(KBr): 3088, 1768, 1708, 1462, 1301, 1108, 1046, 728,
630, 538 cm-1; 1H NMR (200 MHz, DMSO-d6): ppm 7.31
(d, J = 7.3 Hz, 2H), 7.72-7.63 (m, 4H), 7.91 (s, 2H), 8.21 (s,
4H), 8.76 (s, 2H); MS (FAB): m/z 790 (M+); Anal. Calcd for
C38H14Cl2N4O8S2: C, 57.80; H, 1.79 N, 7.10; Found: C,
57.78; H, 1.80; N, 7.08%.
2,7-Di[5-(6,8-dichloro-2-oxo-2H-3-chromenyl)-1,3-thiazol2-yl]-1,2,3,6,7,8-hexahydrobenzo[lmn][3,8]phenanthroline-1,3,6,8-tetraone (18c)
Yield 312 mg, 49%; Yellow solid; mp 202-203 oC; IR
(KBr): 3067, 1766, 1712, 1458, 1402, 1276, 1099, 1054,
732, 624, 542 cm-1; 1H NMR (200 MHz, DMSO-d6): ppm
7.71-7.64 (m, 4H), 7.89 (s, 2H), 8.22 (s, 4H), 8.77 (s, 2H);
MS (FAB): m/z 858 (M+); Anal. Calcd for C38H12Cl4N4O8S2:
C, 53.17; H, 1.41; N, 6.53; Found: C, 53.10; H, 1.38; N,
6.55%.
2,7-Di[5-(6-bromo-2-oxo-2H-3-chromenyl)-1,3-thiazol-2yl]-1,2,3,6,7,8-hexahydrobenzo[lmn][3,8]phenanthroline1,3,6,8-tetraone (18d)
Yield 345mg, 52%; Green solid; mp 252-254 oC; IR (KBr): 3074, 1793, 1727, 1338, 1096, 784, 711, 592 cm-1; 1H
NMR (200 MHz, DMSO-d6): ppm 7.34 (d, J = 7.3 Hz,
2H), 7.70-7.65 (m, 4H), 7.93 (s, 2H), 8.24 (s, 4H), 8.75 (s,
2H); MS (FAB) m/z 878 (M+); Anal. Calcd for
C38H14Br2N4O8S2: C, 51.95; H, 1.61; N, 6.38; Found: C,
51.96; H, 1.59; N, 6.35%.
2,7-Di[5-(6,8-dibromo-2-oxo-2H-3-chromenyl)-1,3-thiazol2-yl]-1,2,3,6,7,8-hexahydrobenzo[lmn][3,8]phenanthroline-1,3,6,8-tetraone (18e)
Yield 392mg, 51%; Pale yellow solid; mp 238-240 oC;
IR (KBr): 3056, 1772, 1732, 1368, 1209, 1097, 1104, 962,
638, 458 cm-1; 1H NMR (200 MHz, DMSO-d6): ppm 7.43
(s, 2H), 7.71-7.64 (m, 2H), 7.89 (s, 2H), 8.22 (s, 4H), 8.77 (s,
2H); 13C NMR (75 MHz, DMSO-d6): ppm 169.0, 168.4,
168.2, 167.7, 141.3, 137.4, 136.6, 135.6, 131.6, 130.75,
130.41, 129.6, 125.4, 124.6, 121.9, 116.25, 115.5, 109.9; MS
(FAB): m/z 1036 (M+); Anal. Calcd for C38H12Br4N4O8S2: C,
44.04; H, 1.17; N, 5.41; Found: C, 44.02; H, 1.18; N, 5.40%.
2,7-Di[5-(8-methoxy-2-oxo-2H-3-chromenyl)-1,3-thiazol-2yl]-1,2,3,6,7,8-hexahydrobenzo[lmn][3,8]phenanthroline1,3,6,8-tetraone (18f)
Yield 296mg, 54%; Pale green solid; mp 223-225 oC; IR
(KBr): 3027, 2985, 1767, 1721, 1656, 1493, 1377, 1207,
1089, 939, 642 cm-1; 1H NMR (200 MHz, DMSO-d6): ppm
3.92 (s, 6H), 7.28 (d, J = 7. 6 Hz, 4H), 7.69-7.61 (m, 4H),
7.93 (s, 2H), 8.22 (s, 4H), 8.79 (s, 1H); MS (FAB): m/z 781
(M+); Anal. Calcd for C40H20N4O10S2: C, 61.54; H, 2.58; N,
7.18; Found: C, 61.55; H, 2.56; N, 7.16%.
2,7-Di[5-(3-oxo-3H-benzo[f]chromen-2-yl)-1,3-thiazol-2yl]-1,2,3,6,7,8-hexahydrobenzo[lmn][3,8]phenanthroline1,3,6,8-tetraone (18g)
Yield 340mg, 56%; Yellow solid; mp 252-255 oC; IR
(KBr): 3083, 1774, 1726, 1624, 1555, 1209, 1099, 995,
783, 741 cm-1; 1H NMR (200 MHz, DMSO-d6): ppm 7.307.32 (m, 8H), 7.72-7.63 (m, 8H), 7.91(s, 2H), 8.23 (s, 4H),
8.76 (s, 2H); MS (FAB): m/z 821 (M+); Anal. Calcd for
C46H20N4O8S2: C, 67.31; H, 2.46; N, 6.83; Found: C, 67.29;
H, 2.43; N, 6.84%.
Kamal et al.
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The authors SFA and JRT are grateful to DST, New
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