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WWU Masters Thesis Collection
2013
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By
Rachael D. Gravon
Accepted in Partial Completion
Of the Requirements for the Degree
Master of Science
ADVISORY COMMITTEE
Chair, Dr. Robin A. Matthews
Dr. Leo Bodensteiner
Dr. Dean Blinn
MASTERS THESIS
In presenting this thesis in partial fulfillment of the requirements for a masters degree at
Western Washington University, I grant Western Washington University the nonexclusive royalty-free right to archive, reproduce, distribute, and display the thesis in any
and all forms, including electronic format, via any digital library mechanisms maintained
by WWU.
I represent and warrant this is my original work, and does not infringe or violate any
rights of others. I warrant that I have obtained permissions from the owner of any third
party copyrighted material included in these files.
I acknowledge that I retain ownership rights to the copyright of this work, including but
not limited to the right to use all or part of this work in future works, such as articles or
books.
Library users are granted permission for individual, research, and non-commercial
reproduction of this work for educational purposes only. Any further digital posting of
this document requires specific permission from the author.
Any copying or publication of this thesis for commercial purposes, or for financial gain,
is not allowed without my written permission.
Rachael Gravon
5/5/2013
In Partial Fulfillment
Of the Requirements for the Degree
Master of Science
by
Rachael D. Gravon
May 2013
ABSTRACT
I sampled forty lakes in the Puget Sound region of northwest Washington to investigate
the relationship between water quality, site characteristics, and algal composition. Water
samples were collected during the summer of 2008 to measure nutrients, alkalinity,
chlorophyll-a, dissolved oxygen, specific conductance, and temperature. Watershed
characteristics were recorded to assess shoreline composition and dominant land use.
Phytoplankton samples were collected, preserved, and concentrated in settling chambers
to determine taxonomic composition and algal biovolume. Unpreserved phytoplankton
samples were also collected and used to generate a species list for each lake.
The data were examined using correlation analysis and hierarchical clustering to
evaluate relationships between water quality parameters and phytoplankton assemblages.
The phytoplankton communities were quite diverse, and many species were collected that
are described as uncommon in the taxonomic literature. Correlation analysis between
water quality variables produced results consistent with the literature. Total phosphorus
and total nitrogen both exhibited significant correlations with chlorophyll-a. In addition,
significant correlations also occurred between alkalinity, pH, and conductivity. There
were also many significant correlations between algal population parameters. In general,
when Cyanobacteria increased in percentage, other species, most notably Chlorophyta,
decreased, and as Cyanobacteria became dominant, other algal populations became less
diverse.
Lakes with similar water quality parameters clustered together. Lakes also
clustered based on algal population structure, though cluster membership was different
for water quality parameters versus algal assemblages. Lakes with high algal density
iv
ACKNOWLEDGEMENTS
I would most sincerely like to thank my advisor, Dr. Robin A. Matthews who has offered
me invaluable opportunities and guidance over the years, as well as my other committee
members, Dr. Leo Bodensteiner and Dr. Dean Blinn. I would also like to thank Joan
Vandersypen, Michael Hilles, and Marilyn Desmul of the Institute for Watershed Studies.
In addition, I would like to thank all other friends, family, and faculty members who have
helped me achieved this goal.
vi
TABLE OF CONTENTS
Abstract...iv
Acknowledgements.vi
List of Figures.ix
List of Tables....xiii
1.0 Introduction..1
2.0 Methods7
2.1 Site Descriptions..7
2.2 Sampling Protocol7
2.3 Water Quality...8
2.3.1 Sample Processing8
2.3.2 Quality Control..9
2.4 Phytoplankton Analysis9
2.4.1 Sample Processing.9
2.4.2 Algal Enumeration, Density, and Biovolume..11
2.4.3 Quality Control12
2.5 Site Analysis...12
2.6 Productivity Analysis......13
2.7 Population Analysis13
2.8 Statistical Analysis.14
3.0 Results and Discussion...15
3.1 Population Structure15
3.2 Correlation Analysis...17
vii
viii
LIST OF FIGURES
Figure 1. Correlation between total phosphorus and chlorophyll-a for both RG and
IWS data...25
Figure 2. Correlation plot between total nitrogen and chlorophyll-a for both RG
and IWS data26
Figure 3. Correlation plot between conductivity and alkalinity for both RG and
IWS data...27
Figure 4. Correlation between total phosphorus and turbidity for RG data28
Figure 5. Correlation between dissolved oxygen and pH for RG data..29
Figure 6. Correlation plot between percent Cyanobacteria and total algal density
for RG data...30
Figure 7. Correlation plot between percent Cryptophyta and total algal density for
RG data.31
Figure 8. Correlation plot between percent Cyanobacteria and percent
Chlorophyta for RG data32
Figure 9. Hierarchical clustering of water chemistry data using squared Euclidean
distance and Wards clustering methods...33
Figure 10. Hierarchical clustering of water chemistry data using squared Euclidean
distance and Wards clustering methods. Lakes are labeled with categorical data
for High (2) or Low (1) Phosphorus...34
Figure 11. Hierarchical clustering of algal species density using squared Euclidean
distance and Wards clustering methods...35
Figure 12. Hierarchical clustering of algal species density using squared Euclidean
distance and Wards clustering methods. Lakes are labeled according to dominant
algal group36
Figure 13. Hierarchical clustering of algal species density using squared Euclidean
distance and Wards clustering methods. Clusters 1 and 2 were subdivided into 2
clusters each..37
Figure 14. Hierarchical clustering of water chemistry data using squared Euclidean
distance and Wards clustering methods. Lakes are labeled with the dominant algal
group.38
ix
xi
xii
LIST OF TABLES
Table 1. Standard methods used for laboratory analyses...39
Table 2. Algal population and diversity statistics for 43 lake samples in
northwestern Washington (from 40 lakes)40
Table 3. Algal taxa list for collections in northwestern Washington.43
Table 4. Dominant species and percent composition of major algal groups for each
lake in northwestern Washington..45
Table 5. Percent composition of the twenty most common algal taxa in northwest
Washington lakes.49
Table 6. Kendalls tau correlation table for water quality parameters.50
Table 7. Kendalls tau correlation table for algal population variables51
Table 8. Kendalls tau correlation table for water quality and algal population
variables...53
Table 9. Mean and median water quality parameter values based on hierarchical
cluster membership.55
Table 10. Mean and median values for algal population statistics based on
hierarchical cluster membership for 2 clusters (Euclidean distance/Wards cluster
method)56
Table 11. Mean and median values for algal population statistics based on
hierarchical cluster membership for two sub-clusters of AD.Cluster 1 and
AD.Cluster 2 (Euclidean distance/Wards cluster method)57
Table 12. Cluster membership for water quality parameters and algal species
density..60
Table 13. Mean and median algal population statistics for clusters based on water
quality data..62
Table 14. Mean and median water quality parameters for clusters based on algal
density data..63
Table 15. Water quality data for lakes in northwestern Washington...69
Table 16. Categorical data for lakes.73
xiii
xiv
1.0 INTRODUCTION
Phytoplankton serve as important biological indicators of an aquatic ecosystems, as they
both affect and are affected by many characteristics of a freshwater ecosystem. In this
regard phytoplankton illustrate the state of an aquatic environment as well as influence
the changes in it. Because many algal species have specialized functional properties for
survival, phytoplankton population structure is an important aspect of assessing these
changes. In this study, I determined the structure of phytoplankton communities in small
lakes of northwestern Washington during the summer of 2008. In addition, I examined
the relationships between the structure of these communities and numerous
characteristics of the lakes. Chemical, biological, and physical characteristics of the
lakes were used to determine what, if any, relationships existed.
Phytoplankton are often considered powerful biological indicators of freshwater
ecosystems (Bellinger and Sigee 2011). Biological indicators act as important measures
of the state of an ecosystem, more so when combined with chemical data (Dixit et al.
1992). The concentration of algae and type of algal community can be attached to certain
watershed characteristics.
Algal communities can influence the physical and chemical composition of the
water column in freshwater environments (Lewis 1995). Planktonic algae are an integral
part of lake food chains, nutrient cycling, and oxygen production. Phytoplankton
photosynthesis regulates, in part, how much oxygen is available to other biota (Prescott
1962). Phytoplankton take part in nutrient cycling via fixation, assimilation, and transfer
through the food web (Barsanti and Gualtieri 2006). The quantity of oxygen and
nutrients such as phosphorus and nitrogen made available by phytoplankton can either
hinder or encourage biotic populations in lakes.
Just as phytoplankton influence a lake ecosystem, they are in turn affected by
characteristics of the ecosystem itself. Numerous lake characteristics influence
phytoplankton assemblages. These characteristics may be spatial, temporal, chemical,
biological, or physical.
Temperature and light have direct effects on phytoplankton production. Algal
species exhibit photosynthetic optima under different irradiance and temperature
conditions (Wehr and Sheath 2002). Photosynthetic response to light intensity is
temperature dependent and species specific (Wetzel 2001). Light penetration and
intensity in lake waters can be highly variable due to surface reflection and the
absorption/diffusion of light by particles suspended in the water column (Prescott 1962).
Temperature also affects photosynthetic rate by influencing carbon dioxide availability
from water-gas exchange and bacterial metabolism (Prescott 1962). Many algal species
exhibit functional characteristics for adapting to differing light conditions which include
changing photosynthetic rate, changing the number of photosynthetic pigments per cell,
or a combination of these photoadaptive strategies (Wetzel 2001). Various mechanisms
such as gas vacuoles, mucilage and lipid production, and flagella allow phytoplankton to
move throughout the water column in order to find optimal conditions.
Alkalinity, pH, and conductivity are properties related to the carbonate cycle in
water. Alkalinity refers to the buffering capacity of a lake, which is most commonly
related to the carbonate system. The pH of a system represents the H+ ion activity and is
often used to illustrate the acidity of water. Both pH and alkalinity work in a complex yet
Phosphorus is often the least abundant nutrient in lakes, and therefore is most
often considered the nutrient that limits the amount of algae growing in a temperatelatitude lake (Schindler 1977).
phosphate, and enters the system via the sediment-water interface or transport via surface
inflows (Barsanti and Gualtieri 2006). This process is affected by dissolved oxygen
supply, mineral solubility, bacteria metabolism, and turbulence. Once in the system,
phosphorus occurs in both organic and inorganic phosphate forms. Organic phosphorus
occurs as phospholipids within living and dead organisms, or adsorbed to organic and
inorganic particles in the water column. Inorganic phosphorus almost exclusively as
orthophosphate, and is measured as soluble reactive phosphorus. Orthophosphate is the
form of phosphorus most easily taken up by phytoplankton (Jansson 1988).
Nitrogen is available in lakes as ammonium, nitrite, dissolved nitrogen gas, and
numerous organic compounds such as amino acids and proteins (Wetzel 2001).
Phytoplankton are able to utilize inorganic nitrogen through fixation or assimilation.
Only Cyanobacteria (blue-green algae) are able to fix nitrogen, by converting dissolved
nitrogen gas into compounds such as ammonium, which can be utilized for amino acids,
proteins, and other cell constituents (Barsanti and Gualtieri 2006). Other phytoplankton
species utilize nitrogen though assimilation. Assimilation refers to the uptake of
inorganic nitrogen compounds for conversion into organic nitrogen forms. Which forms
of nitrogen are present in a lake system can indicate how much nitrogen is available for
use by different algal species.
While phosphorus is most often considered the limiting nutrient in temperatelatitude freshwater systems, nitrogen may also become limiting or co-limiting. In a
2.0 METHODS
2.1 SITE DESCRIPTIONS
Forty lakes in the were sampled for this study. The lakes were located in Whatcom,
Skagit, Snohomish, and Island Counties of Washington State. A list of possible sample
locations was mapped before sampling began in order to collect samples within as small a
time period as possible in order to minimize seasonal effects on lake chemistry. Lake
sites were chosen based on location, size, and elevation. These lakes were all accessible
to the public via a direct means of access, such as a boat launch or public beach. The
selected sample set was comprised of both urbanized and non-urbanized lakes, and
represented a broad range of public use.
brown Nalgene bottles. All samples were kept in the dark and on ice until return to the
lab, which occurred within 6 hours of sample collection.
stored at 4C. Algal species were identified via light microscope to as low a taxonomic
level as possible and were classified according to information found at Algaebase.org, a
regularly updated online taxonomic resource for algae (Guiry and Guiry 2010).
Additional taxonomic sources used were John et al. (2008), Prescott (1962), and Wehr
and Sheath (2002). Any unknown species were photographed and given unique
identification codes. When possible, these unknown species were later identified based
on photographic records. The species information was used to compile a list of species
present in each lake and to assist with species identification in preserved samples. The
remaining unconcentrated sample portions were used to estimate the volume of preserved
sample to be used for cell counts, as different volumes were used based on the density of
the sample.
The preserved phytoplankton samples were used for algal cell counts as well as
additional species identification and photography. Samples were preserved using Lugols
solution, an iodine-based solution that is simple to prepare and preserves algal cells well
without causing structural damage (John et al. 2008, APHA 2005). The preserved
samples were concentrated using a gravitational settling chamber method based on the
work of Hamilton et al. (2001). The settling apparatus is composed of a slide with a well
of known depth and a settling chamber of known volume. A sample is poured into the
chamber and allowed to settle into the slide well, one hour for each milliliter of sample in
the settling chamber. Once settling time is complete, the settling chamber is carefully
removed by sliding a glass cover slip between the bottom of the chamber and the surface
of the slide well.
10
procedure was too time consuming and inaccurate as it required that large colonies of
cells be estimated. To resolve these issues, a ranked log2 scale was developed. The log
scale preserved accuracy in the lower counts and reflected inaccuracy at the larger ranks.
In addition, the scale also relates to the foundation of the diversity index, the truncated
log-normal species distribution. Earlier samples that were counted exactly were later
converted to this scale for uniformity. Not all species identified in the live samples were
present in the preserved samples.
To calculate algal density (cells/mL), the following equation was used to reflect
the magnification used and the volume of the sample in the settling slide:
algae cells/mL= C * 1000 mm3 / A*D*F
Where: C = number of cells counted
A = area of field
D = depth of field
F = number of fields counted
11
A concentration factor was calculated to reflect the volume of sample settled (Appendix
2).
Hillebrand et al. (1999) and EPA method LG401, Standard Operating Procedures for
Phytoplankton Analysis (EPA 2010). When there were differences between the
suggested shapes, EPA (2010) methods were used, for consistency and because the EPA
methods use fewer, more simple shapes. Microscopic photographs were obtained using a
Nikon Eclipse 80i microscope fitted with a Qimaging digital camera and software.
Digital photographs were measured using Adobe Photoshop CS4 software.
12
then divided into categories based on proportion of use. Fifty percent or more was
considered high usage, 25-50% medium, and less than 25% low (Google Maps
2010).
13
14
15
four taxa of Chlorophyta that were dominant in the lakes. These were Botryococcus
braunii, Ankyra sp., Sphaerocystis sp., and Volvox spp. There was one dominant taxon of
Cryptophyta, identified as cryptomonad species C.
There were three lakes with mixed taxa dominance. Squires Lake was dominated
by Aphanocapsa spp. (Cyanobacteria), and Botryococcus braunii (Chlorophyta).
Summer Lake was co-dominated by Botryococcus braunii, Dinobryon spp.,
(Chrysophyta), and a cryptomonad identified as species A. Sunset Lake was codominated by cryptomonad species C and Anabaena spp. (Cyanobacteria).
I also determined the most common taxa in all the lakes (Table 5). It was
apparent that while some taxa were quite common, they were not necessarily collected in
large numbers, and usually the opposite was true. The three most common taxa,
occurring in around 80% of the lakes, comprised a low percent of the total sample. The
most notable exception were Aphanocapsa spp., which occurred in about 65% of the
lakes and contributed an average of about 65% of the total cell count in the samples.
Three species of Chlorophyta listed as rare in the literature, Ankyra ancora,
Paradoxia multiseta, and Pleodorina californica (Guiry and Guiry 2010, John 2008)
were present in my samples. Ankyra ancora was identified in Heart, Crabapple,
Goodwin, Sunset, and Erie Lakes. Paradoxia multiseta was found in Erie, Campbell, and
Sunset Lakes, and Pleodorina californica was identified in Terrell Lake.
Four lakes sampled in the first week of collection were re-sampled during the last
week to evaluate temporal variation of variables over the sample period: Lake Padden,
Squalicum Lake, Squires Lake, and Toad Lake. Squires and Squalicum Lakes exhibited
little change in population structure. Lake Padden was dominated by Aphanocapsa spp.
16
for both samples, but was co-dominated by Aphanocapsa spp. and Anabaena spp. in the
second sample. Toad Lake shifted by a Chlorophyta-dominated population to one
dominated by Cyanobacteria.
among my water quality variables (Table 6), and these results were similar to the Institute
for Watershed Studies historical data. The strongest relationships were between total
phosphorus and chlorophyll (Figure 1), total nitrogen and chlorophyll (Figure 2), and
conductivity and alkalinity (Figure 3). My data were distributed very similarly to those
of the Institute for Watershed Studies, indicating that my water quality data were
consistent with historic data collected from these lakes.
Many of the correlations between the water quality variables were not surprising.
The relationships among total phosphorus, total nitrogen, and chlorophyll has been well
documented (Wetzel 2001). In addition, strong correlations between concentrations of
other sources of nutrients, such as ammonium and total nitrogen, were also expected.
Alkalinity, pH, and conductivity were highly correlated with one another, as were
17
turbidity and total nitrogen, turbidity and total phosphorus (Figure 4), and dissolved
oxygen and pH (Figure 5). I did not include ammonium and nitrate/nitrite in any water
quality analyses as the data for these two variables were largely below detection limits
(Table 1; Appendix A, Table 15).
There were numerous highly significant correlations between different algal
population statistics (Table 7). Total algal density exhibited significant positive
correlations with percent Cyanobacteria (Kendalls tau=0.609, p-value 0.001, Figure 6).
Interestingly, total algal density exhibited significant negative correlations with percent
composition of all other algal groups with the exception of Chrysophyta (Figure 7). This
indicates that as total algal density increased, population structure became increasingly
dominated by Cyanobacteria, with fewer other types of algae present in the sample.
Percent composition of Cyanobacteria was also negatively correlated with all other
species groups, again with the exception of Chrysophyta. The most statistically
significant negative correlation occurred between Cyanobacteria and Chlorophyta (Figure
8), illustrating that as more blue-green algae were present in a population, fewer green
algae were present. The percent Cyanobacteria exhibited a significant negative
correlation with taxa diversity (Kendalls tau = -0.424, p-value 0.001), illustrating that
as blue-green algae become dominant, algal populations become less diverse.
Conversely, the percent Chlorophyta had a significant positive correlation with diversity
(Kendalls tau=0.395, p-value 0.001). Percent composition of Cryptophyta was
positively correlated with diversity and all other algal groups with the exceptions of
Cyanobacteria and Chrysophyta. This indicates that the presence of Cryptophyta in a
sample was usually indicative of a diverse algal population.
18
19
833.4 g-N/mL), which likely influenced the cluster membership. Most of the high-P
lakes that were grouped into Cluster 1 had phosphorus near the 20 g-P/mL level, with
most other variables at levels similar to the other lakes in Cluster 1.
Lakes were then clustered using algal cell density data (Figure 11). Separation of
clusters based on algal cell density was primarily influenced by total algal density and
percent Chlorophyta (Table 10). Lakes in Cluster 2 had a very high algal density, while
lakes in Cluster 1 exhibited a much lower density. Lakes in Cluster 2 were also heavily
dominated by Cyanobacteria, while those in Cluster 1 had more diverse populations.
Lakes in Cluster 1 had higher taxa evenness and diversity. These results agree with the
correlation analysis. Lakes with higher total algal density tended to be dominated by
Cyanobacteria, while those with lower numbers had more diverse populations.
To explore this further, lakes were clustered using algal cell density data and
labeled with dominant algal group (Figure 12). With the exception of one sample, all of
the lakes not dominated by Cyanobacteria were clustered into a sub-cluster of Cluster 1.
Toad Lake was highly dominated by the Chlorophyta Sphaerocystis sp., with a density of
6745 cells/mL out of 9233 cells/mL. This singular taxa domination and higher overall
density was likely responsible for placing Toad Lake in Cluster 2.
Because of the interesting grouping of algal groups in Cluster 1, the two clusters
were each examined as two sub-clusters (Figure 13). The four sub-clusters differed
mostly in total algal density, and percent of Cyanobacteria and Chlorophyta (Table 11).
Cluster 1a had the lowest density (920.5 cells/mL), but was the most diverse (mean
H=1.62) and had the greatest species evenness (J=0.62). This sub-cluster had the lowest
percent of Cyanobacteria, and the highest percentages of all other algal groups. This
20
cluster contained all lake samples that were not dominated by Cyanobacteria, with the
exception of Toad Lake in Cluster 2a. The other diversity indices didnt increase
consistently through the clusters. Cluster 1b had the greatest number of taxa present, and
Cluster 2b had higher diversity and evenness with the exception of Cluster 1a.
There was a consistent grade of percent group composition moving through the
clusters. Moving from Cluster 1a through Cluster 2b, percent composition of the algal
groups tended to decrease, with the exception of Cyanobacteria, which increased. While
Cluster 2b had the highest total density by far, and was almost completely dominated by
Cyanobacteria, this cluster had the highest diversity and evenness with the exception of
Cluster 1a. This indicated that while these lakes did not have the greatest number of taxa
present or phylum dispersal, the distribution of so many individuals among taxa within
the Cyanobacteria phylum resulted in a more diverse population. Six of the ten lakes in
Cluster 2b were co-dominated by two or three taxa, and comprised six of the seven lakes
co-dominated by Cyanobacteria. Conversely, the lakes in Clusters 1b and 2a that were
dominated by Cyanobacteria, with the exception of Sixteen Lake, were dominated by a
single taxa.
Possible similarities between the way the data clustered for the water quality and
algal density data sets were investigated. Lakes did not always cluster together for the
two data sets (Table 12). As performed with the algal density data, the lakes were
clustered by water quality data and labeled with dominant algal group (Figure 14). The
groups were dispersed among the clusters unlike the algal density data, which grouped
them together. Diversity indices and percent group composition was also investigated for
the water quality clusters (Table 13). While total algal density for the two water quality
21
clusters was notably different, the other parameters were very similar. Water quality data
was also investigated for the algal density clusters (Table 14). While the lakes did not
always cluster the same for the two data sets, there was a general increase of parameter
values, similar to the water quality data set. Lakes with higher water quality variables
tended to cluster together for both data sets, and lakes with high concentrations of
nutrients had larger algal densities.
For both data sets, there were four Lakes that clustered similarly in the high water
quality and high algal density clusters: Fazon, Wiser, Lone, and Campbell Lakes. These
lakes contained extremely high levels of nitrogen and phosphorus and contained
extremely high numbers of Cyanobacteria. It is likely that the high nutrient loading in
these lakes led to Cyanobacteria blooms. While the two categorical groups for
agriculture and urbanization did not exhibit any apparent clustering patterns with either
water quality variables or algal population data, these lakes were all categorized as
having medium to high shoreline development.
The lakes containing rare species did not exhibit a consistent water quality or
population structure profile. The lakes were dispersed among clusters for both water
quality and algal density. These species occurred in lakes with both high and low
phosphorus. Lakes were also clustered using algal biovolume data rather than density
data. The lakes clustered almost identically for both data sets.
22
4.0 CONCLUSION
The algal community structure of small lakes in the northwest Puget Sound is diverse.
Over 70 algal taxa were identified in the lakes sampled. Cyanobacteria were most often
the dominant phylum, followed by Chlorophyta and Cryptophyta. Two lakes were codominated by Cyanobacteria and Chlorophyta. Aphanocapsa spp. were dominant in 19
of 40 lakes, and co-dominant in 4 lakes. There were numerous incidences of codomination, both within and between groups and taxa. Nearly 20% of the lakes
dominated by Cyanobacteria were co-dominated by two or three species. Three lakes had
mixed-group taxa dominance including Cyanobacteria, Chlorophyta, Chrysophyta, and
Cryptophyta. Common taxa often occurred in small numbers, with the exception of
Aphanocapsa spp. Three species considered to be rare (Ankyra ancora, Paradoxia
multiseta, and Pleodorina californica) were identified in multiple lakes.
Correlation analysis for water quality variables exhibited many statistically
significant relationships. Algal density correlation analysis revealed that as total algal
density increased, Cyanobacteria became the more dominant algal group and sample
diversity decreased. There were few significant correlations between water quality
variables and algal community variables.
Lakes clustered based on similarities of both water quality and algal density, but
cluster membership was not the same. Lakes with higher water values for water quality
parameters clustered together for the water quality data set. Algal density clusters
showed differences in total density, phylum group composition, and diversity indices.
Lakes dominated by groups other than Cyanobacteria clustered together, with the
exception of one lake. Additionally, lakes with similar total algal densities clustered
23
together. Clusters that were dominated by Cyanobacteria and had mid-range total
densities were less diverse than the other clusters.
Four lakes formed a consistent cluster for both parameters, Campbell, Fazon,
Lone, and Wiser Lakes. These lakes contained high nutrient concentrations and were
experiencing Cyanobacteria blooms. With the exception of these four lakes, neither
correlation nor cluster analysis indicated a consistent relationship between any given
water quality parameters and algal community structure.
24
1.5
1.0
0.0
0.5
log10(chl.a)
2.0
2.5
-0.5
0.0
0.5
1.0
1.5
2.0
2.5
log10(tp)
Figure 1. Correlation between total phosphorus and chlorophyll for both RG and
IWS data.
25
1.5
1.0
0.0
0.5
log10(chl.a)
2.0
2.5
2.0
2.5
3.0
3.5
log10(tn)
Figure 2. Correlation plot between total nitrogen and chlorophyll for both RG and
IWS data.
26
2.0
1.4
1.2
0.6
0.8
1.0
log10(alk)
1.6
1.8
1.5
2.0
2.5
log10(cond)
Figure 3. Correlation plot between conductivity and alkalinity for both RG and
IWS data.
27
0.5
-0.5
0.0
log10(turb)
1.0
1.5
-0.5
0.0
0.5
1.0
1.5
2.0
2.5
log10(tp)
28
ph
10
10
15
do.mg
29
20
3.5
2.5
3.0
log10(tot.a.d.)
4.0
4.5
20
40
60
80
100
bg.per
Figure 6. Correlation plot between percent Cyanobacteria (bg.per) and total algal
density (tot.a.d.) for RG data.
30
3.5
2.5
3.0
log10(tot.a.d.)
4.0
4.5
0.0
0.5
1.0
1.5
log10(crypt.per)
Figure 7. Correlation plot between percent Cryptophyta (crypt.per) and total algal
density (tot.a.d.) for RG data.
31
2.0
1.0
0.0
0.5
log10(grn.per)
1.5
20
40
60
80
100
bg.per
32
33
Figure 9. Hierarchical clustering of water chemistry data using squared Euclidean distance and Wards clustering methods.
34
Figure 10. Hierarchical clustering of water chemistry data using squared Euclidean distance and Wards clustering
methods. Lakes are labeled with categorical data for high (2) or low (1) Phosphorus.
35
Figure 11. Hierarchical clustering of algal species density using squared Euclidean distance and Wards clustering
methods.
36
Figure 12. Hierarchical clustering of water chemistry data using squared Euclidean distance and Wards clustering
methods. Lakes are labeled with the dominant algal group: Cyanobacteria (bg), Chlorophyta (grn), Cryptophyta (crypt)
and mixed.
37
Figure 13. Hierarchical clustering of algal species density using squared Euclidean distance and Wards clustering
methods. Clusters 1 and 2 were subdivided into 2 clusters each.
38
Figure 14. Hierarchical clustering of algal species density using squared Euclidean distance and Wards clustering methods.
Lakes are labeled according to dominant algal group: Cyanobacteria (bg), Chlorophyta (grn), Cryptophyta (crypt) and mixed.
Abbreviation
Method
Detection
Sensitivity
Limit
Dissolved
DO
SM4500-O G
0.1 mg/L
temp
SM2550
0.1 C
Alkalinity
alk
SM2320
0.8 mg/L
Conductivity
cond
SM2510
2.8 S/cm
Chlorophyll
chl.a
SM10200 H
0.1mg/m3
Dissolved
DO
SM450-O.C.
0.1 mg/L
pH
pH
SM4500-H
0.03 pH unit
Turbidity
turb
SM2130
0.2 NTU
Ammonium
NH4
SM4500-NH3
8.5 g-N/L
7.1 g-N/L
Nitrate/Nitrite
NO3
SM4500-NO3
8.7 g-N/L
3.4 g-N/L
Total Nitrogen
TN
SM4500-N C
13.6 g-N/L
41.8 g-N/L
Soluble Reactive
SRP
SM4500-P G
2.1 g-P/L
1.1 g-P/L
SM4500-P H
2.2 g-P/L
4.0 g-P/L
Oxygen- YSI
TemperatureYSI
Oxygen
Phosphate
Total Phosphorus TP
APHA. 2005. Standard Methods for the Examination of Water and Wastewater, 20th
Edition. American Public Health Association, American Water Works Association, and
Water Environment Federation, Washington DC. Information provided the Institute for
Watershed Studies, 2008.
39
Table 2. Algal population and diversity statistics for 43 lake samples (from 40 lakes). H=Shannons Index (Diversity).
J=Pielous J (Evenness). S=number of species present.
40
Lake
Beaver
Bug
Squalicum
Squalicum.2
Squires
Summer
Toad
Reed
Sunset
Armstrong
Big
Cain
Campbell
Cavanaugh
Clear
Crabapple
Cranberry
Deer
Erie
Dominant
Algal Group
Chlorophyta
Chlorophyta
Chlorophyta
Chlorophyta
Chloro/Cyano
Chlorophyta
Chlorophyta
Cryptophyta
Cryptophyta
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Total Algal
Density
(cells/mL)
1043
1624
307
470
1155
592
9233
806
452
2425
11954
7848
31387
527
822
4639
14554
17078
17561
H'
0.93
1.67
2.14
1.58
1.84
2.46
0.83
0.82
1.74
1.56
0.77
0.22
1.66
0.87
2.15
0.93
1.6
0.54
0.92
J
0.35
0.7
0.72
0.6
0.66
0.93
0.34
0.39
0.79
0.55
0.32
0.08
0.69
0.42
0.71
0.37
0.62
0.18
0.37
S
14
11
20
14
16
14
11
8
9
17
11
15
11
8
21
16
13
19
12
Table 2. Algal population and diversity statistics for 43 lake samples (from 40 lakes). H=Shannons Index (Diversity).
J=Pielous J (Evenness). S=number of species present.
41
Lake
Fazon
Goodwin
Goss
Grandy
Heart
Howard
Ki
Loma
Lone
Louise
Martha
McMurray
Padden
Padden.2
Pass
Shoecraft
Silver
Sixteen
Squires.2
Sunday
Dominant
Algal Group
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyano/Chloro
Cyanobacteria
Total Algal
Density
(cells/mL)
23748
15984
5749
9294
19041
9515
6789
21810
37008
9036
7521
15457
3868
13017
13416
3513
2836
3925
836
11570
H'
0.79
0.37
0.93
0.86
0.49
0.38
0.19
0.9
0.8
0.36
0.8
0.8
0.73
1.13
1.4
0.88
0.68
1.3
1.9
0.98
J
0.31
0.13
0.32
0.29
0.2
0.14
0.08
0.41
0.38
0.14
0.3
0.32
0.28
0.45
0.49
0.3
0.23
0.45
0.72
0.36
S
13
16
18
19
12
14
11
9
8
14
15
12
13
12
17
18
18
18
14
15
Table 2. Algal population and diversity statistics for 43 lake samples (from 40 lakes). H=Shannons Index (Diversity).
J=Pielous J (Evenness). S=number of species present.
Lake
Tennant
Terrell
Toad.2
Wiser
Dominant
Algal Group
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Total Algal
Density
(cells/mL)
5103
2412
46375
23625
R1
0.77
2.14
1.29
1.29
H'
0.27
1.33
1.4
1.19
J
0.14
0.48
0.55
0.47
S
7
16
14
13
42
Group
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Chlorophyta (Green)
Cyanobacteria (Blue-green)
Cyanobacteria (Blue-green)
Cyanobacteria (Blue-green)
Cyanobacteria (Blue-green)
Cyanobacteria (Blue-green)
Cyanobacteria (Blue-green)
Cyanobacteria (Blue-green)
44
Group
Cyanobacteria (Blue-green)
Cyanobacteria (Blue-green)
Cyanobacteria (Blue-green)
Cyanobacteria (Blue-green)
Cyanobacteria (Blue-green)
Cyanobacteria (Blue-green)
Chrysophyta
Chrysophyta
Chrysophyta
Chrysophyta
Chrysophyta
Chrysophyta
Chrysophyta
Chrysophyta
Chrysophyta
Chrysophyta
Chrysophyta
Cryptophyta
Cryptophyta
Cryptophyta
Cryptophyta
Dinophyta
Dinophyta
Dinophyta
Dinophyta
Euglenophyta
Euglenophyta
Euglenophyta
Bacillariophyta (Diatom)
Bacillariophyta (Diatom)
Bacillariophyta (Diatom)
Bacillariophyta (Diatom)
Bacillariophyta (Diatom)
Bacillariophyta (Diatom)
Bacillariophyta (Diatom)
Bacillariophyta (Diatom)
Table 4. Dominant species and percent composition of major algal groups for lakes
in northwest Washington.
Lake
Squalicum
Bug
Squalicum.2
Squires
Summer
Toad
Beaver
Reed
Sunset
Fazon
Heart
Sunday
Loma
Cain
Cavanaugh
Deer
Erie
Goodwin
Goss
Grandy
Howard
Ki
Louise
Martha
Padden
Padden.2
Pass
Shoecraft
Silver
Squires.2
Tennant
McMurray
Crabapple
Toad.2
Dominant
Algal Group
Chlorophyta
Chlorophyta
Chlorophyta
Chloro/Cyano
Chlorophyta
Chlorophyta
Chlorophyta
Cryptophyta
Cryptophyta
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyano/Chloro
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Dominant
Algal Species
Ankyra
Botryococcus braunii
Botryococcus braunii
Botryococcus/Aphanocapsa
Botryococcus braunii
Sphaerocystis
Volvox
Cryptomonas sp.C
Cryptomonas sp.C
Anabaena
Anabaena
Aphanizomenon
Aphanizomenon/Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Aphanocapsa
Merismopedia/Aphanocapsa
Aphanocapsa/Snowella
45
% Chlorophyta
51
61
68
45
46
75
90
3
3
1
1
2
1
1
0
4
1
2
6
21
0
0
0
3
1
0
2
11
9
37
0
6
1
20
Table 4. Dominant species and percent composition of major algal groups for lakes
in northwest Washington.
Lake
Sixteen
Armstrong
Campbell
Terrell
Lone
Big
Clear
Cranberry
Wiser
Lake
Squalicum
Bug
Squalicum.2
Squires
Summer
Toad
Beaver
Reed
Sunset
Fazon
Heart
Sunday
Loma
Cain
Cavanaugh
Deer
Erie
Goodwin
Goss
Grandy
Howard
Ki
Louise
Dominant
Algal Group
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
Cyanobacteria
%
Cyanobacteria
0
3
0
39
0
22
0
10
25
98
97
82
99
97
75
95
97
97
85
77
98
97
94
Dominant
Algal Species
Woronichinia/Aphanocapsa
Aphanocapsa
Lyngbya
Microcystis
Microcystis/Woronichinia
Woronichinia
Woronichinia
Woronichinia
Woronichinia
% Chrysophyta
0
0
0
7
24
0
0
0
0
0
0
15
0
0
0
0
0
0
6
1
0
1
5
46
% Chlorophyta
2
3
0
15
0
0
10
3
1
% Cryptophyta
27
25
12
5
13
1
2
80
46
0
1
0
0
1
4
0
2
0
2
0
1
0
0
Table 4. Dominant species and percent composition of major algal groups for lakes
in northwest Washington.
Lake
Martha
Padden
Padden.2
Pass
Shoecraft
Silver
Squires.2
Tennant
McMurray
Crabapple
Toad.2
Sixteen
Armstrong
Campbell
Terrell
Lone
Big
Clear
Cranberry
Wiser
%
Cyanobacteria
85
90
88
90
81
89
41
95
86
96
79
91
78
96
76
100
96
61
96
97
% Chrysophyta
5
2
11
0
3
0
7
0
0
1
0
3
12
0
0
0
1
17
0
0
% Cryptophyta
1
3
0
4
0
1
5
4
1
2
0
3
5
0
7
0
0
2
0
1
Lake
Squalicum
Bug
Squalicum.2
Squires
Summer
Toad
Beaver
Reed
Sunset
Fazon
Heart
Sunday
% Dinophyta
4
9
1
0
2
0
0
2
16
0
0
0
% Euglenophyta
6
0
1
2
11
0
3
0
0
0
0
0
%
Bacillariophyta
11
3
17
1
4
3
5
4
11
1
1
0
47
Table 4. Dominant species and percent composition of major algal groups for lakes
in northwest Washington.
Lake
Loma
Cain
Cavanaugh
Deer
Erie
Goodwin
Goss
Grandy
Howard
Ki
Louise
Martha
Padden
Padden.2
Pass
Shoecraft
Silver
Squires.2
Tennant
McMurray
Crabapple
Toad.2
Sixteen
Armstrong
Campbell
Terrell
Lone
Big
Clear
Cranberry
Wiser
% Dinophyta
0
0
14
0
0
0
0
0
0
0
0
6
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
2
0
0
% Euglenophyta
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
7
1
0
0
0
0
0
0
1
0
0
0
0
0
48
%
Bacillariophyta
0
1
7
0
0
0
0
0
1
0
1
1
3
1
4
4
1
3
0
8
0
0
1
2
4
1
0
3
8
1
1
Table 5. Percent composition of the twenty most common algal taxa in northwest
Washington lakes.
Genus (+/- species)
Cryptomonas sp. A
diatom spp.
Cryptomonas sp. C
Aphanocapsa spp.
Anabaena spp.
cryptomonad sp.B
Cyclotella spp.
Peridinium spp.
Oocystis spp.
Dinobryon spp.
Ankyra sp.
Botryococcus braunii
Scenedesmus spp.
Sphaerocystis sp.
Aphanizomenon sp.
Elakatothrix sp.
Trachelomonas spp.
Cosmarium spp.
Aulacoseira spp.
Fragilaria spp.
% of lakes
83.7
83.7
79.1
65.1
58.1
58.1
53.5
46.5
39.5
39.5
37.2
37.2
37.2
37.2
37.2
32.6
32.6
27.9
27.9
27.9
49
Average
% when present
1.53
1.62
5.65
65.66
13.12
0.61
0.51
1.23
1.04
4.52
3.66
12.98
0.68
8.50
8.40
0.92
1.98
0.21
1.63
0.78
50
Temperature
DO
pH
Conductivity
Turbidity
Alkalinity
Total P
SRP
Total N
Chl.a
Temperature
DO
pH
Conductivity
Turbidity
Alkalinity
Total P
SRP
Total N
Chl.a
0.093
0.304
0.286
0.112
0.174
0.225
-0.181
0.186
0.168
Total P
(g-P/mL)
***0.377
***0.494
***0.390
DO
(mg/L)
pH
pH
***0.591
0.326
0.082
0.284
-0.083
-0.052
0.082
0.095
***0.576
0.204
***0.521
0.107
-0.029
0.153
0.333
SRP
(g-P/mL)
TN
(g-N/mL)
0.303
0.210
***0.411
Significance: p 0.05*
Conductivity
(S/cm)
Turbidity
(NTU)
Alkalinity
(mgCaCO3/L)
0.349
***0.794
0.312
0.173
0.302
***0.382
0.400
***0.539
0.340
***0.435
0.413
***0.359
0.269
0.282
***0.384
Total Algal
Density
% Chlorophyta
% Cyanobacteria
% Chrysophyta
% Cryptophyta
% Dinophyta
% Euglenophyta
% Bacillariophyta
Diversity (H')
Evenness (J)
# Species Present
Chl.a
Total Algal
Density
% Chlorophyta
% Cyanobacteria
% Chrysophyta
% Cryptophyta
% Dino Dinophyta
% Euglenophyta
% Bacillariophyta
Diversity (H')
Evenness (J)
# Species Present
Chl.a
Total Algal
Density
% Chlorophyta
**-0.362
***0.609
-0.244
***-0.620
***-0.530
***-0.440
***-0.450
-0.240
-0.220
-0.126
***0.462
% Chrysophyta
% Cryptophyta
0.012
0.052
0.077
-0.029
0.193
0.093
0.282
-0.141
Significance: p 0.05*
***-0.626
0.059
0.320
0.272
**0.393
0.263
***0.395
0.303
0.318
-0.207
***0.522
***0.455
***0.419
**0.365
***0.398
0.011
-0.270
% Cyanobacteria
-0.212
***-0.483
***-0.478
***-0.427
***-0.469
***-0.424
***-0.400
-0.140
0.259
% Dinophyta
0.253
***0.493
0.349
***0.412
-0.087
-0.233
51
Total Algal
Density
% Chlorophyta
% Cyanobacteria
% Chrysophyta
% Cryptophyta
% Dinophyta
% Euglenophyta
% Bacillariophyta
Diversity (H')
Evenness (J)
# Species Present
Chl.a
Total Algal
Density
% Chlorophyta
% Cyanobacteria
% Chrysophyta
% Cryptophyta
% Dinophyta
% Euglenophyta
% Bacillariophyta
Diversity (H')
Evenness (J)
# Species Present
Chl.a
% Euglenophyta
% Bacillariophyta
0.236
0.331
0.311
0.090
-0.250
Diversity (H')
Evenness (J)
***0.862
0.157
0.018
Significance: p 0.05*
0.331
**0.373
-0.027
-0.116
0.007
0.055
52
Table 8. Kendalls tau correlation table for water quality and algal population
variables.
Temperature
DO
pH
Conductivity
Turbidity
Alkalinity
Total P
SRP
Total N
Total Algal
Density
0.250
0.306
**0.380
**0.358
0.172
0.293
0.137
-0.013
0.187
% Chlorophyta
-0.219
-0.178
-0.115
-0.098
-0.130
-0.030
0.036
0.061
-0.049
% Cyanobacteria
**0.357
0.200
0.213
0.228
0.061
0.153
0.001
-0.078
0.119
Temperature
DO
pH
Conductivity
Turbidity
Alkalinity
Total P
SRP
Total N
% Chrysophyta
-0.293
-0.297
-0.347
-0.339
-0.347
-0.356
-0.288
-0.167
*-0.356
% Cryptophyta
-0.160
-0.138
-0.193
-0.169
-0.103
-0.108
0.034
0.105
0.096
% Dinophyta
-0.136
-0.147
-0.125
-0.244
0.057
-0.181
0.029
-0.071
-0.071
Temperature
DO
pH
Conductivity
Turbidity
Alkalinity
Total P
SRP
Total N
% Euglenophyta
-0.321
*-0.395
***-0.485
-0.261
0.017
-0.166
0.204
0.189
0.120
% Bacillariophyta
-0.275
0.027
-0.023
-0.082
0.114
0.016
0.010
0.217
0.014
Significance: p 0.05*
Table 8. Kendalls tau correlation table for water quality and algal population
variables.
Temperature
DO
pH
Conductivity
Turbidity
Alkalinity
Total P
SRP
Total N
Diversity (H')
-0.149
-0.048
-0.050
-0.045
0.042
0.025
0.197
0.093
0.127
Significance: p 0.05*
Evenness (J)
-0.136
-0.078
-0.028
-0.070
0.110
0.028
0.228
0.131
0.171
# Species Present
-0.108
-0.122
-0.170
-0.098
-0.334
-0.102
-0.241
-0.080
-0.192
54
Table 9. Mean and median water quality parameter values based on hierarchical cluster membership.
55
WQ.Cluster 1 Mean
Median
Temperature
(C)
21.78
21.80
DO
(mg/L)
7.36
7.78
WQ.Cluster 2 Mean
Median
23.05
23.50
8.19
7.95
8.25
8.47
209.16
207.45
Alkalinity
(mgCaCO3/L)
30.45
WQ.Cluster 1 Mean
31.35
Median
Total P
(g-P/mL)
13.38
10.81
Total N
(g-N/mL)
403.74
417.60
Chl.a
(g/L)
4.30
3.42
55.17
59.10
74.79
39.65
1193.20
929.20
14.93
9.97
WQ.Cluster 2 Mean
Median
Conductivity
pH
(S/cm)
7.64
88.90
7.64
98.65
Turbidity
(NTU)
1.40
1.24
7.96
3.48
Table 10. Mean and median values for algal population statistics based on hierarchical cluster membership for 2 clusters
(Euclidean distance/Wards cluster method).
AD.Cluster 1
Mean
Median
1.34
1.32
0.51
0.47
14.50
15.00
Total
Density
(cells/mL)
2155.20
1389.50
AD.Cluster 2
Mean
Median
0.84
0.80
0.33
0.32
13.12
13.00
16013.44
13416.00
AD.Cluster 1
Mean
Median
%
Chlorophyta
23.10
9.50
%
Cyanobacteria
51.75
68.00
%
Chrysophyta
4.10
0.50
% Cryptophyta
12.40
4.50
AD.Cluster 2
Mean
Median
6.36
1.00
89.36
96.00
1.56
0.00
0.96
0.00
H'
56
AD.Cluster 1
Mean
Median
% Dinophyta
2.55
0.00
AD.Cluster 2
Mean
Median
0.24
0.00
%
%
Euglenophyta Bacillariophyta
1.60
4.30
0.00
3.00
0.08
0.00
1.28
1.00
Table 11. Mean and median values for algal population statistics based on hierarchical cluster membership for two subclusters of AD.Cluster 1 and AD.Cluster 2 (Euclidean distance/Wards cluster method).
AD.Cluster 1a
Mean
Median
1.62
1.71
0.62
0.68
13.75
14.00
Total
Density
(cells/mL)
920.50
814.00
AD.Cluster 1b
Mean
Median
0.91
0.91
0.33
0.31
15.63
17.50
4007.25
3896.50
AD.Cluster 2a
Mean
Median
0.67
0.79
0.25
0.29
14.13
14.00
12969.20
13017.00
AD.Cluster 2b
Mean
Median
1.06
0.94
0.43
0.40
11.80
12.50
24107.20
22717.50
H'
57
Table 11. Mean and median values for algal population statistics based on hierarchical cluster membership for two subclusters of AD.Cluster 1 and AD.Cluster 2 (Euclidean distance/Wards cluster method).
%
Cyanobacteria
27.50
17.50
% Chrysophyta
4.58
0.00
% Cryptophyta
19.00
9.50
Mean
Median
AD.Cluster 1b
Mean
Median
4.13
2.50
88.13
89.50
3.38
2.50
2.50
2.50
AD.Cluster 2a
Mean
Median
7.80
1.00
87.87
95.00
1.53
0.00
0.80
1.00
AD.Cluster 2b
Mean
Median
2.90
1.00
94.00
96.50
1.60
0.00
0.20
0.00
58
AD.Cluster 1a
% Chlorophyta
35.75
41.00
Table 11. Mean and median values for algal population statistics based on hierarchical cluster membership for two subclusters of AD.Cluster 1 and AD.Cluster 2 (Euclidean distance/Wards cluster method).
%
%
Euglenophyta Bacillariophyta
2.58
6.25
1.00
4.50
59
AD.Cluster 1a
Mean
Median
% Dinophyta
4.25
2.00
AD.Cluster 1b
Mean
Median
0.00
0.00
0.13
0.00
1.38
1.00
AD.Cluster 2a
Mean
Median
0.40
0.00
0.00
0.00
1.47
1.00
AD.Cluster 2b
Mean
Median
0.00
0.00
0.00
0.00
1.10
1.00
Table 12. Cluster membership for water quality parameters and algal species
density.
Lake
Armstrong
Beaver
Big
Cavanaugh
Clear
Crabapple
Deer
Goodwin
Goss
Grandy
Howard
Ki
Loma
Louise
Martha
McMurray
Padden
Padden.2
Reed
Shoecraft
Silver
Sixteen
Squires
Squires.2
Summer
Sunday
Sunset
Toad
Toad.2
Bug
Cain
Campbell
Cranberry
Erie
Fazon
Heart
Lone
Pass
WQ
Cluster
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
2
2
2
2
2
2
2
2
2
AD
Cluster
1
1
2
1
1
1
2
2
1
2
2
2
2
2
2
2
1
2
1
1
1
1
1
1
1
2
1
2
2
1
2
2
2
2
2
2
2
2
60
Table 12. Cluster membership for water quality parameters and algal species
density.
Lake
Squalicum
Squalicum.2
Tennant
Terrell
Wiser
WQ
Cluster
2
2
2
2
2
Algae
Cluster
1
1
1
1
2
61
Table 13. Mean and median algal population statistics for clusters based on water quality data.
WQ.Cluster 1 Mean
Median
1.74
1.69
1.04
0.88
0.40
0.35
14.24
14.00
Total
Density
(cells/mL)
8200.72
5749.00
WQ.Cluster 2 Mean
Median
1.59
1.41
1.15
1.26
0.45
0.48
13.00
13.00
14150.29
13985.00
%
Chlorophyta %Cyanobacteria
13.83
70.90
3.00
85.00
%
Chrysophyta
4.17
1.00
%
Cryptophyta
6.10
1.00
% Dinophyta
1.48
0.00
0.00
0.00
6.00
1.50
1.00
0.00
R1
62
WQ.Cluster 1 Mean
Median
H'
WQ.Cluster 2 Mean
Median
14.64
1.00
74.43
96.00
WQ.Cluster 1 Mean
Median
%
Euglenophyta
0.79
0.00
%
Bacillariophyta
2.48
1.00
WQ.Cluster 2 Mean
Median
0.64
0.00
3.21
1.00
Table 14. Mean and median water quality parameters for clusters based on algal density data.
AD.Cluster
1a
AD.Cluster
1b
63
AD.Cluster
2a
AD.Cluster
2b
Temperature
(C)
DO
(mg/L)
DO
(%)
Conductivity
(S/cm)
pH
Turbidity
(NTU)
Mean
Median
21.07
20.50
6.55
6.97
74.22
78.65
7.50
7.38
77.97
75.75
1.98
1.66
Mean
Median
22.19
22.75
7.23
7.99
80.16
90.10
7.58
7.60
105.35
104.60
1.15
0.89
Mean
Median
22.73
23.10
8.25
8.00
95.67
94.20
8.03
7.84
148.97
104.80
1.95
1.38
Mean
Median
23.26
23.45
8.43
8.51
98.48
101.70
8.19
8.47
216.84
207.45
10.06
5.84
Table 14. Mean and median water quality parameters for clusters based on algal density data.
AD.Cluster
1a
AD.Cluster
1b
64
AD.Cluster
2a
AD.Cluster
2b
Alkalinity
(mgCaCO3/L)
Total P
(g-P/mL)
SRP
(g-P/mL)
TN
(g-N/mL)
Chl.a
(g/L)
Mean
Median
29.68
26.50
23.02
20.50
4.68
2.65
569.68
517.30
3.81
2.08
Mean
Median
34.29
32.80
17.19
7.60
3.94
4.30
472.39
428.75
3.53
2.88
Mean
Median
40.03
33.00
17.99
12.20
2.88
1.80
563.53
443.70
5.34
3.90
Mean
Median
53.90
58.00
86.69
35.40
22.91
4.10
1179.66
946.85
20.58
13.20
LITERATURE CITED
APHA. 2005. Standard Methods for the Examination of Water and Wastewater, 20th
Edition. American Public Health Association, American Water Works
Association, and Water Environment Federation, Washington D.C.
Barsanti, L., and P. Gualtieri. 2006. Algae: Anatomy, Biochemistry, and Biotechnology.
CRC Press Taylor and Francis Group, Florida.
Bellinger, E.G., and D.C. Sigee. 2011. Freshwater Algae: Identification and Use as
Bioindicators. Wiley.
Bortleson, G.C., N.P. Dion, J.B. McConnell, and L.M. Nelson. 1976. Reconnaissance
data on lakes in Washington. Washington Department of Ecology Water Supply
Bulletin 43, Olympia, Washington.
Dixit, S.S., J.P. Smol, J.C. Kingston, and D.F. Charles. 1992. Diatoms: powerful
indicators of environmental change. Environmental Science and Technology
26:23-33.
EPA. 2010. Standard Operating Procedures for Phytoplankton Analysis. Environmental
Protection Agency. http://nsdi.epa.gov/grtlakes/lmmb/methods/phy.pdf.
Accessed January 2011.
Google Maps. 2010. http://maps.google.com/maps?hl=en&tab=wl. Accessed February
2010.
Guiry, M.D. and & Guiry, G.M. 2010. AlgaeBase. World-wide electronic publication,
National University of Ireland, Galway. http://algae.base.org.
65
66
Prescott, G.W. 1962. Algae of the Western Great Lakes area. WM. C. Brown
Publishers, Iowa.
Schindler, D.W. 1977. Evolution of phosphorus limitation in lakes. Science
195: 260-262.
Schindler, D.W. 1978. Factors regulating phytoplankton production and standing crop
in the worlds freshwaters. Limnology and Oceanography 23:478-486.
Sterner, K.W. 2008. On the phosphorus limitation paradigm for lakes. International
Review of Hydrobiology 93:433-445.
Washington State Legislature, 173-201A-230. 2006. http://apps.leg.wa.gov/WAC/
default.aspx?cite=173-201A-230. Accessed March 2011.
Wehr, J.D. and R.G. Sheath. 2002. Freshwater Algae of North American: Ecology and
Classification. Academic Press.
Wetzel, R.G. 2001. Limnology: Lake and River Ecosystems. 3rd ed. Academic Press,
California.
67
68
Table 15. Water quality data. Asterisks (*) indicate values below detection limit.
Lake
Padden
Toad
Squalicum
Squires
Sixteen
McMurray
Cavanaugh
Summer
Big
Clear
Beaver
Cain
Reed
Mirror
Louise
Deer
Lone
Goss
Cranberry
Pass
Campbell
Heart
Erie
Silver
Fazon
Wiser
Tennant
Terrell
Bug
Sunset
Grandy
Armstong
Ki
Martha
Month
7
7
7
7
7
7
7
7
7
7
7
8
8
8
8
8
8
8
8
8
8
8
8
8
8
8
8
8
8
8
8
8
8
8
Day
28
28
28
28
30
30
30
30
30
30
30
6
6
6
6
11
11
11
11
11
11
11
11
18
18
18
18
18
18
18
21
21
21
21
Year
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
69
Temperature
(C)
19.9
20.3
18.1
20.4
19.0
19.9
19.0
18.4
20.4
19.0
20.1
23.1
23.8
14.1
23.0
22.9
23.4
23.1
23.6
22.2
24.6
23.4
24.0
25.3
25.1
25.6
20.7
24.2
24.0
24.5
21.1
22.7
23.7
23.6
Table 15. Water quality data. Asterisks (*) indicate values below detection limit.
Lake
Howard
Crabapple
Goodwin
Sunday
Loma
Shoecraft
Padden.2
Squalicum.2
Squires.2
Toad.2
Lake
Padden
Toad
Squalicum
Squires
Sixteen
McMurray
Cavanaugh
Summer
Big
Clear
Beaver
Cain
Reed
Mirror
Louise
Deer
Lone
Goss
Cranberry
Pass
Campbell
Month
8
8
8
8
8
8
9
9
9
9
Alkalinity
(mgCaCO3/L)
30.2
45.9
32.6
17.1
33.1
32.3
10.3
11.6
37.6
32.1
52.5
18.2
16.4
13.4
22.4
20.1
63.8
32.5
63.2
74.7
84.5
Day
21
21
21
21
21
21
3
3
3
3
Year
2008
2008
2008
2008
2008
2008
2008
2008
2008
2008
Total P
(g-P/mL)
6.5
10.6
35.2
9.7
7.5
3.1
5.4
11.0
11.5
1.9*
43.4
8.7
17.6
24.9
6.8
3.6
376.1
0.0*
38.5
20.4
108.5
70
SRP
(g-P/mL)
4.2
5.3
13.4
3.3
6.0
4.0
2.9
2.4
4.8
1.8*
15.2
5.2
2.3
8.6
1.8*
0.0*
169.8
0.0*
2.3
6.1
4.8
Temperature
(C)
23.5
24.0
24.0
22.4
23.5
22.8
21.2
20.7
20.6
20.6
TN
(g-N/mL)
428.8
509.3
970.2
431.5
428.7
443.7
317.8
502.8
410.0
249.0
531.8
888.2
417.0
74.1
379.2
553.4
2715.4
433.2
1068.1
683.4
2121.8
Table 15. Water quality data. Asterisks (*) indicate values below detection limit.
Alkalinity
Lake
(mgCaCO3/L)
Heart
72.0
Erie
68.8
Silver
50.6
Fazon
52.8
Wiser
85.0
Tennant
55.0
Terrell
26.2
Bug
48.8
Sunset
65.2
Grandy
52.0
Armstong
25.0
Ki
8.1
Martha
29.0
Howard
40.6
Crabapple
11.4
Goodwin
33.0
Sunday
25.6
Loma
8.7
Shoecraft
36.5
Padden.2
30.6
Squalicum.2
26.8
Squires.2
16.6
Toad.2
45.8
Lake
Padden
Toad
Squalicum
Squires
Sixteen
McMurray
Cavanaugh
Summer
NO3
(g-N/mL)
2.1*
92.9
2.8*
0.6*
2.2*
108.6
81.3
6.4*
Total P
(g-P/mL)
23.9
17.0
8.8
98.6
131.0
78.2
26.3
40.8
21.5
25.0
21.3
4.9
12.8
12.2
7.6
9.1
32.3
30.1
7.6
13.1
43.9
19.5
16.4
NH3
(g-N/mL)
6.2*
38.6
11.7
4.6*
10.6
7.0*
15.1
17.3
SRP
(g-P/mL)
1.7
0.1*
4.4
10.4
28.1
8.9
1.9*
3.0
1.4*
4.6
6.6
0.2*
0.4*
0.5*
1.0*
0.2*
3.0
0.8*
0.4*
2.8
7.0
1.6*
3.4
Chl.a
(g/L)
2.29
4.11
1.39
2.00
4.32
8.18
1.35
4.84
71
TN
(g-N/mL)
825.6
833.4
263.3
1476.3
1545.5
1021.1
874.2
881.1
543.1
221.0
450.4
262.3
418.2
335.9
422.6
334.8
680.8
558.7
331.0
288.2
800.5
317.2
394.4
Table 15. Water quality data. Asterisks (*) indicate values below detection limit.
Lake
Big
Clear
Beaver
Cain
Reed
Mirror
Louise
Deer
Lone
Goss
Cranberry
Pass
Campbell
Heart
Erie
Silver
Fazon
Wiser
Tennant
Terrell
Bug
Sunset
Grandy
Armstong
Ki
Martha
Howard
Crabapple
Goodwin
Sunday
Loma
Shoecraft
Padden.2
Squalicum.2
Squires.2
Toad.2
NO3
(g-N/mL)
3.3*
1.3*
4.1*
656.2
2.9*
14.7
2.0*
1.0*
3.6*
0.9*
1.1*
1.4*
5.5*
0.9*
0.6*
6.0*
6.2*
5.6*
2.9*
0.0*
2.9*
0.0*
2.0*
14.1
2.1*
2.0*
1.7*
41.3
1.6*
4.0*
3.3*
2.4*
2.2*
2.9*
4.2*
8.7
NH3
(g-N/mL)
2.8*
2.5*
20.3
16.9
9.9
0.0*
7.9*
1.4*
14.6
1.2*
8.8
4.8*
7.4*
4.8*
6.1*
15.2
7.2*
29.9
6.6*
11.2
4.4*
2.4*
14.0
34.7
3.2*
8.0*
6.7*
42.0
8.9
18.7
6.7*
5.6*
8.4
9.8
6.5*
13.7
Chl.a
(g/L)
10.58
1.49
3.23
3.90
2.16
0.75
3.71
2.46
18.32
2.78
13.32
4.72
76.09
15.87
3.09
1.81
11.96
32.16
7.97
3.45
15.78
7.80
4.19
4.49
2.04
3.44
2.08
1.61
3.40
13.08
8.10
2.98
6.91
1.03
1.19
6.36
72
Lake
Armstrong
Beaver
Big
Bug
Cain
Campbell
Cavanaugh
Clear
Crabapple
Cranberry
Deer
Erie
Fazon
Goodwin
Goss
Grandy
Heart
Howard
Ki
Loma
Lone
Louise
Martha
McMurray
Mirror
Padden
Padden.2
Pass
Reed
Shoecraft
Silver
Sixteen
Squalicum
Squalicum.2
Squires
Squires.2
Urbanization
m
l
h
l
h
h
h
m
h
l
h
m
m
h
m
l
l
h
h
h
l
h
h
h
h
m
m
l
l
h
l
l
h
h
l
l
Agriculture
l
h
l
l
l
m
l
m
l
l
l
l
m
l
l
l
l
l
l
l
h
l
l
l
l
l
l
l
l
l
l
l
l
l
l
l
73
Hi/Lo
Phosphorus
hi
hi
lo
hi
lo
hi
lo
lo
lo
hi
lo
lo
hi
lo
lo
hi
hi
lo
lo
hi
hi
lo
lo
lo
lo
lo
lo
hi
hi
lo
lo
lo
hi
hi
lo
lo
Lake
Summer
Sunday
Sunset
Tennant
Terrell
Toad
Toad.2
Wiser
Urbanization
l
h
h
h
h
h
h
h
Agriculture
l
l
l
l
l
l
l
m
74
Hi/Lo
Phosphorus
lo
hi
hi
hi
hi
lo
lo
hi
0.51 mm
Radius (r):
12.7 mm
Area (r2):
0.54 mm
75
CF for 25 mL:
0.258 mL (final volume)/ 25 mL (settled volume)
CF = 0.01
CF for 50 mL:
0.258 mL (final volume)/ 50 mL (settled volume)
CF = 0.005
76
77
Equation
(4*(1/3)*3.1416*(DIAM/2)^2*(L))+(3.1416*(W/2)^2*DEP))
(L^3)
(3.1416*(W/2)^2*L)
(W*DEP*(L/2))
((2/3)*3.1416*(W/2)^2*(L/2))
((4/3)*3.1416*(DIAM/2)^3)
(3.1416*(L/2)*(W/2)*D)
(L*W*D)
6*((1/3)*3.1416*(W/2)^2*L)
(3.1416*W^2*((L+W)/2))/12
78
7.20 m
Average Length:
68.8 m
Average Biovolume:
79
933.73 m
3.54 m
Average Length:
55.48 m
Average Biovolume:
80
182.02 m
81
82
7.46 m
83
84
9.62 m
85
86
6.25 m
87
3.41 m
Average Length:
9.34 m
Average Biovolume:
88
28.43 m
5.76 m
89
90
2.84 m
Average Length:
7.63 m
Average Biovolume:
91
16.11 m
11.13 m
Average Length:
56.62 m
Average Biovolume:
92
5508.72 m
6.22 m
93
94
6.46 m
Average Length:
23.97 m
Average Biovolume:
95
166.23 m
96
6.28 m
97
2.16 m
Average Length:
16.45 m
Average Biovolume:
20.09 m
98
99
100
17.81 m
Average Length:
34.27 m
Average Biovolume:
17075.08 m
101
16.75 m
102
103
7.51 m
Average Length:
25.54 m
104
6.13 m
105
17.76 m
Average Length:
34.60 m
Average Biovolume:
17142.85 m
106
9.06 m
107
3.23 m
Average Length:
4.62 m
Average Biovolume:
37.86 m
108
2.53 m
109
6.45 m
110
6.10 m
Average Length:
10.01 m
Average Biovolume:
292.54 m
111
4.12 m
112
18.12 m
Average Length:
2.28 m
Average Biovolume:
587.95 m
113
3.48 m
114
19.58 m
Average Length:
2.34 m
Average Biovolume:
704.58 m
115
2.19 m
116
3.52 m
117
6.76 m
118
9.83 m
119
120
6.81 m
121
6.43 m
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
4.20 m
Average Length:
75.32 m
Average Biovolume:
1043.52 m
139
140
22.39 m
Average Length:
6.68 m
Average Biovolume:
2630.12 m
141
142
37.28 m
Average Length:
9.16 m
Average Biovolume:
9998.58 m
143
144