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.MYCOBACTERIUM
TUBERCULOSIS COMPLEX.
1. Mycobacterium tuberculosis
Human Tubercle Bacilli
Koch bacillus
or
.PATHOGENESIS
.CORD FACTOR (trehalosedi-mycolate)
.This causes serpentine growth in vitro
.This inhibit WBC migration
.Disrupt mitochondrial respiration and oxidative
phosphorylation
.TUBERCULIN (surface protein) with mycolicacid
.Can cause delayed hypersensitivity and mediate cell
mediated immunity
.Can mediate damage by immune system
2. Mycobacterium bovis
.Causative agent of tuberculosis in cattle, dogs, cats,
swine and rabbits
.Can cause human tuberculosis after ingestion of
milk from infected cow.
.After ingestion it can penetrate the GIT and invade
the lymphatic of oropharynx
.Niacin and nitrate negative
.It resembles water droplets on middle brook media
3.Mycobacterium africanum
DISEASE:
Tuberculosis
. consumption disease
.Koch disease
.One of the oldest disease known to man since STONE
AGE
.Philippines ranks 9thamong the 22 countries still battling
the disease (before 7th)
.250,000 Filipinos are being infected with Tuberculosis
annually and 75 patients are dying every day.
.40% of Philippine population is infected
.Global emergency because of rapid development of
MDRTB
.Major public health ranking as 6thleading cause of
mortality and morbidity
.Chronic infection that frequently involves the lungs,
although other organ may be infected
.It can be disseminated miliary
MOTT
.Non contagious
.Can be found in surface waters. Soils and cigarettes .
.Runyon s Classification:
1. PHOTOCHROMOGENS
.Mycobacteriathat develops pigment when exposed to
light
.Develop yellow pigment when exposed to constant light
source and they are non pigmented in the dark
a. M. kansasi
yellow bacillus
c. M. simiae
d. M. asiaticumsimilar to M. simiae
.SCOTOCHROMOGENS
.Mycobacteriathat are pigmented in the light and in the dark
.Produces yellow to orange pigment in the dark and
when exposed to light the pigment intensifies to red to
orange pigment
a. M. scrofulaceum
b. M. szulgai: both photochromogenand scotochromogen
c. M. xenopi: produces colonies with branching hyphaeon CMA. Describe as birds
st.
d. M. gordonae: tap water bacillus
e. M. flavescence
f. M. thermoresistable: able to grow at 52C.
.NONPHOTOCHROMOGENS
.Mycobacteriathat do not develop pigment
a. M. malmoense
b. M. haemophilum
c. M. terrae-trivalecomplex
d. Mycobacterium avium-intracellulare(MAI): Batty
bacillus; most frequently found in AIDS patients and the
disease usually involves the GIT
ne
.RAPID GROWERS
.Not classified according to pigment
.They are able to grow in 3-5 days in
culture media;
.M.
.M.
.M.
.M.
fortitum
chelonei
phlei
smegmatis
.CHARACTERISTICS OF SPUTUM:
.It should be mucous fluid with air bubbles, containing solid or purulent partic
les and
occasionally browning streaks of blood
.Should be 3-5 mL
.In gram stain it should have at least 25 WBC/LPO or 5WBC/OIO
.If the sample has > 25 epithelial cells/LPO, it is considered saliva.
.Salivary specimen should not be rejected in the laboratory because highly posit
ive
patients may give positive results even in salivary specimen.
LABORATORY DIAGNOSIS
I . PREPARATION OF SMEAR
DIRECT SMEAR
.Using a stick or a wire loop fish out enough yellowish mucopurulentor cheesy pa
rticle in the sputum
.Spread the sputum in a small circular pattern on a clean slide approximately 2
x 3 in cm in sizeymoving it up and the sand.
.Before flame sterilization of wire loop dip first the wire loop in a washing bo
ttle (with sand and alcohol) and remove the excess sputum from the
wire loop . (WASHING BOTTLE: may contain and or glass beads with 90-95% ethanol
or 5% cresol)
.Fixation of the smear:
.Air dry
.By passing through the flame 2-3 times
Egg Based
.Lowenstein-Jensen
.L-J Gruft
.L-J with pyruvicacid
.L-J with Iron
.Petragani
.American thoracic Society
B. Liquid media
.Bactec12 B medium
.MiddleBrook7H9 broth
.SepticheckAFB
III.BIOCHEMICAL TEST:
1.Niacin test(Nicotinic acid)
Principle: Niacin + aniline dye + cyanobromide= (+)
yellow
.This test is useful particularly in ID of M. tuberculosis.
.M.tb, M. simiae, M. chelonae(+)
2. Catalasetest
.Reagent: 30% H2O2
.Semi-Quantitative test: determined by measuring the
height of the column bubbles when H2O2 is added
.Catalaseheat stability: determined by heating the
specimen to 68 Celsiusfor 20 minsand then by
adding hydrogen peroxide.
.Calataseof M. tb, M. bovis, M. gastriand M. haemophilumis
becomes deactivated.
.POSITIVE RESULT: bubble formation or effervescence
4.Tween80(polyoxyethelenesorbitanmono-oleate)
hydrolysis
.Tween80 in the presence of Tween80 lipase it will
produce oleic acid. Upon the release of oleic acid red
color will be formed.
.Positive result: red color/pink color
5.TelluriteReduction Test
.Determine the ability of an organism to reduce
potassium tellurite
.This test is use to differentiate other M. Aviumfrom
other nonscotochromogens
.All rapid growers reduce telluritein 3 days.
6. Arylsulfatase
.Arylsulfataseis an enzyme produced by M. fortitum-chelonei.
.Arylsulfatasesplits the sulfur group from TRIPOTASSIUM
PHENOLPHTALEIN forming free phenolphthalein. This free
phenolphthalein is detected by sodium bicarbonate
.POSITIVE: formation of pink color after the addition of sodium
carbonate.
8. Iron uptake
.Determine the ability of organism to grow in the presence of 20%
ferric citrate.
.Only rapid growers are able to grow in the presence of iron
.This is use to differentiate M. fortitumand M. chelonei
.M. fortitum(+)
.M. chelonei(-)
NONCULTIVABLE MOTT:
Mycobacterium leprae Hansen s bacillus
.Agent of Hansen s disease or leprosy
.Acid fast rods (seen in punch biopsy),
in AFB, cigarette-packet or in picket-fence
.Obligate intracellular parasites that cannot
be cultured in vitro (not cultivable in agar)
.Grown in mouse foot pad and armadillo
.Optimal growth at less than body temperature
.Can hydrolyze 3,4-dihydroxy-phenylalanine(DOPA)
.Exhibits tropism to peripheral nerves
.RESERVOIR: human mucosa, skin and peripheral nerves are
the only significant reservoir;Some infected armadillos in
Texas and Louisiana
.TRANSMISSION: nasal discharge from untreated lepromatousleprosy patient.
LABORATORY DIAGNOSIS:
.punch biopsy or nasal scrapings ; acid fast
stains
.LEPROMIN skin test
.Cannot grown in artificial culture media
.Can be grown in armadillo and foot pads of
mice
TREATMENT:
.Multidrug Theraphy:
.Rifampicin
.Clofazimine
.Dapsone
Bacillus
Bacillus
.large gram (+) rods, aerobic or facultative
anerobes
.All sp. are motile except B. anthracis
.3 species:
1.Bacillus anthracis
2.Bacillus cereus
3.Bacillus subtilis
1.Bacillus anthracis
.Gram (+) rod in long chain
.Bamboo shaped in
apperance
.Center piece for counter terrorism
.Zoonotic
Cultural characteristics
1.In BAP:
.non hemolytic
.describe as medusa head or lion head
colonies
.beaten egg white consistency
Bacillus Cereus
.fried rice bacillus
.associated with food poisoning from eating
contaminated rice
Two Possible toxins
1.Emetic toxin (heat stable)
.With vomiting within 6hrs after ingestion of
contaminated food.
.Most patient recover without medical
intervention
2. Diarrheal Type (heat labile toxin)
.With diarrheal effects seen within 12 hours
after ingestion of contaminated foods
Colonial Morphology:
.Small shiny colonies to large
spreading ones
.May produce lavander color
colonies in bap and
produces wide zone of
hemolysis.
Differential test
Bacillus anthracis
Bacilluscereus
Motility
Non-motile
motile
Capsule
Present
Absent
Hemolysis
Non hemolytic
.-hemolysison
BAP
Growth on 45C
Not able
Able
Salicilinpenetration
Negative
Positive
PenicilinG
susceptibility
Susceptible
resistant
Bacillus subtillis
.Most common laboratory contaminant
.the spore is centrally located
.Causes opportunistic infection
.Associated in eye infection in heroin
addicts
.COLONIES:
Large, flat, dull -hemolytic producing a
ground glass appearance.
Clostridium
.Anaerobic or aerotolerantgram positive
bacilli that forms spores.
.Soil and environment inhabitants
.Not zoonotic
.Medically important species:
1. C. perfringens
2. C. botulinum
3. C. tetani
4. C. difficle
5 Groups Of Clostridia
1.Gas Gangrene Group
-includes: C. perfringens, C. novyi, C.
bifermentans, C. septicum, C. sordelii
2. Tetanus
3.Botulism
4.Antibiotic Associated PseudomembranousColitis
5.Miscellaneous Group
Clostridium perfringens
.C. welchii, Bacillus capsulatus, Gangrene
bacillus
.Myonecrosisand food poisoning
Disease:
1.Gas Gangrene life threatening toxin
mediated destruction of muscles and other
tissues
2.Food Poisoning due to atoxin
3.Necrotic Enteritis / Fire in the Bowel type C
toxin
Laboratory Diagnosis:
1.Abundant growth + gas in chopped meat
medium
2.NaglerReaction or Lecithovitallinreaction
.Due to atoxin, lecithinaseC and
phospholipaseC.
.Mc Clung or NeyomycinEYA
.+ : opalescence in agar without antitoxin
.-: no opalescence in agar with antitoxin
Clostridium tetani
.Tack head bacillus, Drum stick, Lollipop
bacillus, Tennis racket bacillus
.Sporangia are terminally located
.Iron loving organism
.Tetanus or lock jaw
.Acquired by deep puncture wound
.Exhibit swarming phenomenon
.Produces exotoxin (tetanolysin,
tetanospasmin)
Disease
Tetanus ( lock jaw) characterized by
prolonged muscle contraction
2. Neonatal tetanus
.Generalized tetanus in new born
.Use of unsterile instrument in cutting the
umbilical cord.
3. Localized tetany -uncommon form
.Spasm at same anatomic area
4. Cranial tetany
rare form
Prevention:
Vaccination:
.Infants : Tetanous toxoid vaccination
.2,4,6 months with booster at 12-15months
.Children: 4-6 yrs DPT
Laboratory Diagnosis
.Gelatinase and indole (+)
.Does not usually cultured from clinical specimens
.Dx is more on clinical findings and history taking
Clostridium botulinum
.Canned good bacillus; Bacillus botulinum
.Agent botulism
.BOTULISM results from the liberation of
botulinumtoxin which binds to the synapse of
the cholinergic nerve fibers resulting to acute
and flaccid paralysis
DISEASES
1.Food botulism: free toxin in canned foods
2.Wound botulism: improperly sterilized surgical
dressing and contaminated cuts
3.Infant botulism: most common type; ingestion
of spores from contaminated honey
Diagnosis
.Based on clinical findings, symptoms and
history taking.
.Confirmatory Test: Mouse Neutralization Test
Treatment:
.Anti-toxin
Clostridium difficile
.Normal flora of the GIT, urethra of small % of
normal healthy adults
.Hospital acquired diarrhea
.Triggered by broad-spectrum antibiotics
(clindamycinand ampicillin)
.Antibiotic associated pseudomembranouscolitis
.Toxins:
.Toxin A (enterotoxin)-hemorrhagic secretion of fluid
in GE
.Toxin B (cytotoxin)
.Diagnosis:
.CytotoxinAssay: confirmatory test
.Tissue Culture: gold standard for the Toxin ID
NON-SPOREFORMERS
Corynebactrium
Mycobacterium
Listeria
Nocardia
GENUS: LISTERIA
.Gram-positive, nonspore-forming rods
.Facultative intracellular
.Tumbling motility
Listeria monocytogenes
.Distinguishing Characteristics
.Small Gram-positive rods
.Beta hemolytic, non spore-forming rod on BA
.Tumbling motility in broth; actin jet motility in cells
.Facultative intracellular parasite
.Cold growth
.Reservoir
.Widespread: animals (gastrointestinal and genital tracts),
unpasteurized milk products, plants, and soil
.Cold growth: soft cheeses, deli meats, cabbages
(coleslaw)
Listeria monocytogenes
.Transmission
.Foodborne, across the placenta, or by contact during
delivery
.Pathogenesis
.Listeriolysin O, a -hemolysin: facilitates rapid egress
from phagosome into cytoplasm, thus evading killing
when lysosomal contents are dumped into phagosome;
jets directly (by actin filament formation) from
cytoplasm to another cell.
.Immunologic immaturity predisposes to serious
infection.
Listeria monocytogenes
.Diseases
.Listeriosis (human, peaks in summer)
.Healthy adults and children: generally asymptomatic or diarrhea with low
% carriage
.Pregnant women: symptomatic carriage, septicemia characterized by
fever and chills; can cross the placenta in septicemia.
.Neonatal Disease
.Early-onset: (granulomatosis infantiseptica) utero transmission; sepsis
with high mortality; disseminated granulomas with central necrosis.
.Late-onset: 2-3 weeks after birth rom fecal exposure; meningitis with
septicemia.
.Immunocompromised Patients (IC pts)
.Septicemia and meningitis (most common clinical presentation)
.Listeria meningitis is the most common cause of meningitis in renal
transplant patients and adults with cancer.
Listeria monocytogenes
.Treatment
.Ampicillin with gentamicin added for IC patients
.Prevention
.Precautions with food may reduce incidence
Actinomyces israelii
.Distinguishing Characteristics
.Anaerobic, Gram-positive branching rods
.Reservoir
.Human; normal flora of gingival crevices andfemale
genital tract
.Transmission
.Endogenous
Actinomyces israelii
.Pathogenesis
.Invasive growth in tissues with compromised oxygen supply; anaerobic
growth
.Disease
.Actinomycosis
.Generally not painful but very invasive,penetrating all tissues including bone
.Tissue swelling .draining abscesses(sinus tracts) with sulfur granules(hard
yellow microcolonies) in exudates that can be used for microscopy or culture
.Only in tissues with low oxygenation (Eh)
.Forms
.Crvicofacial (lumpy jaw): dental trauma or poor oral hygiene
.Pelvic: from thoracic or sometimes IUD s
.Thoracic: aspiration with contiguous spread
.Abdominal: surgery or bowel trauma
.CNS: solitary brain abscessesmost common
Actinomyces israelii
.Treatment
.Ampicillinor penicillin Gand surgical drainage
GENUS: NOCARDIA
.BACTERIA
.Gram-positive filaments breaking up into rods
.Aerobic
.Partially acid-fast (some areas of smear will be
blue and some red)
Nocardia asteroides
.Distinguishing Characteristics
.Aerobic
.Gram-positive branching rods
.Partially acid-fast
.Reservoir
.Soil, dust
.Transmission
.Airborne or traumatic implantation
.Pathogenesis
.No toxins or virulence factors known
.Immunosuppression and cancer predisposeto
pulmonary infection.
Nocardia asteroides
.Diseases
.Nocardiosis
.Cavitary bronchopulmonary nocardiosis
.Sx: cough, fever, dyspnea
.May spread hematogenously to brain (brain abscesses)
.Cutaneous/subcutaneous nocardiosis
.Starts with traumatic implantation
.Sx: cellulitiswith swelling .draining subcutaneous abscesses
withgranules (mycetoma)
.Treatment
.Sulfonamides (high dose) or
trimethoprim/sulfamethoxazole
Corynebacterium
.Slender, pleomorphicgram
positive bacilli, catalasenegative,
oxidasepositive
Corynebacteriumdiptheriae
.Kleb-Loefflersbacillus
.Most virulent specie of Corynebacterium
.Nasopharynxbut not Normal flora
.Agent of diptheria( associated with pseudomembraneformation, toxemia and
no bacterimia)
Two forms of diptheria
1. Respiratory diptheriae
.Diptheriatoxin mucous membrane of RT inflammation and
pseudomembraneformation of oropharynxrespiratory obstruction.
.Sorethroatwith pseudomembranebullneckand with potential respiratory
obstruction.
.MOT: inhalation of contaminated respiratory droplets
2. cutaneousdiptheriae
.Characterized by non healing ulcers and membrane formation
.MOT: contact with cutaneouslesions
Pathogenesis:
.Toxin producing strains have -prophagecarrying genes for
toxin.(lysogeny, corynephage)
.Most important virulence factor: tox-gene
.DiptheriaToxin (A-B component)
.Inhibits the protein synthesis
.Effects on oropharynx:
.Dirty gray pseudomembrane( made up of dead cells and fibrin exudate)
.Extension of infection into larynx, trachea ------obstruction
Culture:
1.BAP
2.Modified TindalesAgar
.Contains tellurite
.Important selective media and differentiating media for C. diptheriae
3.LoefflersSerum Media
.This enhances the formation of metachromaticgranules of C.
diptheriae
4.Potassium TelluriteAgar
.Important primary isolation media
1.PAI Coagulated serum
2.CystineTellutiteBlood Agar
.Selective and differential medium for C. diptheriae.
3 colonial Type of C. diptheriae
1.Gravis type : largest colonial type
2.MitisType: has fried egg appearance on BAP; producing a bleach like
odor on telluriteagar
3.Intermediustype: smallest colonies