plot(mydata2,fit$cluster)

plotcluster(mydata2,fit$cluster)
library("MASS",
lib.loc="/Library/Frameworks/R.framework/Versions/3.3/Resou
rces/library")
clusplot(mydata2, fit$cluster, color=TRUE, shade=TRUE, labels=2,
lines=0)
library(fpc)
require(fpc)
install.packages("fpc")
plotcluster(mydata2,fit$cluster)
require(fpc)
plotcluster(mydata2,fit$cluster)
library("xlsx",
lib.loc="/Library/Frameworks/R.framework/Versions/3.3/Resou
rces/library")
mynewdata <- read.xlsx("dataset1.xlsx",SheetName = "mydataset")
mynewdata <- read.xlsx("dataset1.xlsx",sheetName = "mydataset")
View(mynewdata)
summary(mynewdata)
is.na(mynewdata)
View(mynewdata)
summary(mynewdata)
grep("^Missing", mynewdata)
View(mynewdata)
is.numeric(mynewdata$SEX)
is.numeric(mynewdata$RELIGION)
is.numeric(mynewdata$MARITAL)
is.factor(mynewdata$MARITAL)
mynewdata$MARITAL = as.numeric(mynewdata$MARITAL)
is.numeric(mynewdata)
is.factor(mynewdata$MARITAL)
is.numeric(mynewdata$MARITAL)
is.numeric(mynewdata$RACE)
is.numeric(mynewdata$DISTRICT)
is.factor(mynewdata$DISTRICT)
mynewdata$DISTRICT = as.numeric(mynewdata$DISTRICT)
is.numeric(mynewdata$DISTRICT)
is.numeric(mynewdata$OCCUPATION)
is.factor(mynewdata$OCCUPATION)
mynewdata$OCCUPATION = as.numeric(mynewdata$OCCUPATION)
summary(mynewdata)

clear
is.factor(mynewdata$OCCUPATION)
is.numeric(mynewdata$OCCUPATION)
summary(mynewdata)
mynewdata <- read.xlsx("dataset1.xlsx",sheetName = "mydataset")
library("xlsx",
lib.loc="/Library/Frameworks/R.framework/Versions/3.3/Resou
rces/library")
detach("package:xlsxjars", unload=TRUE)
library("xlsxjars",
lib.loc="/Library/Frameworks/R.framework/Versions/3.3/Resou
rces/library")
summary(mynewdata)
mynewdata <- read.xlsx("dataset1.xlsx",sheetName = "mydataset")
View(mynewdata)
summary(mynewdata)
library("xlsx",
lib.loc="/Library/Frameworks/R.framework/Versions/3.3/Resou
rces/library")
detach("package:xlsxjars", unload=TRUE)
library("xlsxjars",
lib.loc="/Library/Frameworks/R.framework/Versions/3.3/Resou
rces/library")
ls()
rm(mydata)
ls()
rm(mydata2)
mydata <- read.xlsx("dataset2.xlsx",sheetName = "mydataset")
View(mydata)
summary(mydata)
View(mydata)
is.data.frame(mydata)
mydata1 = subset(mydata, select = c("SEX", "RELIGION", "MARITAL",
"RACE", "DISTRICT",
"OCCUPATION.MAJOR.GROUP","DATE.OF.ORIGINAL.DIAGNOSIS
", "AGE.DIAGNOSED..YRS"))
mydata1 = subset(mydata, select = c(SEX, RELIGION, MARITAL, RACE,
DISTRICT,
OCCUPATION.MAJOR.GROUP,DATE.OF.ORIGINAL.DIAGNOSIS,
AGE.DIAGNOSED..YRS))
mydata1 = subset(mydata, select = c(SEX, RELIGION, MARITAL, RACE,
DISTRICT,

OCCUPATION.MAJOR.GROUP,DATE.OF.ORIGINAL.DIAGNOSIS,
AGE.DIAGNOSED..YRS.))
View(mydata1)
is.na(mydata1)
mydata1
?is.na
is.na(mydata1$MARITAL)
typeof(mydata1)
str(mydata1)
mydata1[mydata1 == 'Missing'] <- NA
mydata1[mydata1 == 'NA'] <- NA
mydata1[mydata1 == 'NA'] <- NA
ls()
rm(mydata1)
ls()
mydata1 = subset(mydata, select = c(SEX, MARITAL, RACE, DISTRICT,
OCCUPATION.MAJOR.GROUP, AGE.DIAGNOSED..YRS.))
View(mydata1)
?sapply
example("sapply")
sapply(mydata1, typeof)
str(mydata1)
is.na(mydata1)
is.na(mydata1$DISTRICT)
mydata1[mydata1 == 'NA'] = NA
is.na(mydata1$DISTRICT)
?na
?complete.cases
is.na(mydata1$MARITAL)
sum(!complete.cases((mydata1)))
which(!complete.cases((mydata1)))
mydata1[complete.cases(mydata1), ]
sum(!complete.cases((mydata1)))
which(!complete.cases((mydata1)))
mydata2 <- mydata1[complete.cases(mydata1), ]
str(mydata2)
is.na(mydata2$MARITAL)
View(mydata2)
sum(!complete.cases((mydata2)))
View(mydata1)
sum(!complete.cases((mydata1)))
View(mydata2)

sum(!complete.cases((mydata2)))
ls()
library("xlsx",
lib.loc="/Library/Frameworks/R.framework/Versions/3.3/Resou
rces/library")
library("cluster",
lib.loc="/Library/Frameworks/R.framework/Versions/3.3/Resou
rces/library")
mydataw6 <- read.xlsx("dataset2forweek6.xlsx",sheetName =
"mydatasetw6")
mydataw6 <- read.xlsx("dataset2forweek6.xlsx",sheetName =
"mydatasetw6")
mydataw6 <- read.xlsx("dataset2forweek6.xlsx",sheetName =
"mydatasetw6")
View(mydataw6)
View(mydata2)
summary(mydataw6)
mydata1w6 = subset(mydataw6, select = c(SEX, RELIGION, MARITAL,
RACE, DISTRICT,
OCCUPATION.MAJOR.GROUP,DATE.OF.ORIGINAL.DIAGNOSIS,
AGE.DIAGNOSED..YRS.))
View(mydata1w6)
is.na(mydata1w6)
is.na(mydata1w6$MARITAL)
str(mydata1w6)
mydata1w6[mydataw6 == 'NA'] <- NA
mydata1w6[mydata1w6 == 'NA'] <- NA
ls()
rm(mydata1w6)
ls()
mydata1w6 = subset(mydataw6, select = c(SEX, MARITAL, RACE,
DISTRICT, OCCUPATION.MAJOR.GROUP,
AGE.DIAGNOSED..YRS.))
View(mydata1w6)
sapply(mydata1w6, typeof)
str(mydata1w6)
is.na(mydata1w6)
is.na(mydata1w6$DISTRICT)
mydata1w6[mydata1w6 == 'NA'] = NA
?complete.cases
is.na(mydata1w6$MARITAL)
which(!complete.cases((mydata1w6)))

mydata1w6[complete.cases(mydata1w6), ]
sum(!complete.cases((mydata1w6)))
which(!complete.cases((mydata1w6)))
mydata2w6 <- mydata1w6[complete.cases(mydata1w6), ]
str(mydata2w6)
is.na(mydata2w6$MARITAL)
View(mydata2w6)
sum(!complete.cases((mydata2w6)))
View(mydata1w6)
sum(!complete.cases((mydata1w6)))
View(mydata2w6)
str(mydata2w6)
summary(mydata2w6)
mydata2w6 <- scale(mydata2w6) #standardize variables
sum(!complete.cases((mydata2w6)))
is.numeric(mydata2w6$SEX)
is.numeric(mydata2w6$MARITAL)
is.factor(mynewdata2W6$MARITAL)
is.factor(mydata2W6$MARITAL)
is.numeric(mydata2w6$MARITAL)
is.factor(mydata2w6$MARITAL)
mydata2w6$MARITAL = as.numeric(mydata2w6$MARITAL)
is.numeric(mydata2w6$MARITAL)
is.numeric(mydata2w6$RACE)
is.numeric(mydata2w6$DISTRICT)
is.factor(mydata2w6$DISTRICT)
mydata2w6$DISTRICT = as.numeric(mydata2w6$DISTRICT)
is.numeric(mydata2w6$DISTRICT)
is.numeric(mydata2w6$OCCUPATION.MAJOR.GROUP)
is.numeric(mydata2w6$AGE.DIAGNOSED..YRS.)
mydata2w6 <- scale(mydata2w6) #standardize variables
View
View(mydata2w6)
fit.km <- kmeans(mydata2w6, 3) # 3 cluster solutions
aggregate(mydata2w6,by=list(fit.km$cluster),FUN=mean) #get cluster
means
mydata2w6 <- data.frame(mydata2w6,fit.km$cluster)
fit.km$cluster
table(mydata2w6$fit.km.cluster)
View()
View(mydata2w6)
table(mydata2w6$fit.km.cluster)

clusplot(mydata2w6, fit.km$cluster, color=TRUE,

shade=TRUE,labels=2, lines=0) #plotting cluster solutions
clusplot(mydata2w6, fit.km$cluster, color=TRUE,
shade=TRUE,labels=10, lines=0) #plotting cluster solutions
clusplot(mydata2w6, fit.km$cluster, color=TRUE,
shade=TRUE,labels=3, lines=0) #plotting cluster solutions
clusplot(mydata2w6, fit.km$cluster, color=TRUE,
shade=TRUE,labels=5, lines=0) #plotting cluster solutions
clusplot(mydata2w6, fit.km$cluster, color=TRUE,
shade=TRUE,labels=4, lines=0) #plotting cluster solutions
clusplot(mydata2w6, fit.km$cluster, color=TRUE,
shade=TRUE,labels=10, lines=0) #plotting cluster solutions
clusplot(mydata2w6, fit.km$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
library(fpc)
plotcluster(mydata2w6, fit.km$cluster)
library(xlsx)
write.xlsx(mydata2w6)
write.xlsx(mydata2w6, file = "mydata2w6.xlsx")
sum(!complete.cases((mydata1w6)))
forexperiment <- mydata1w6[complete.cases(mydata1w6), ]
sum(!complete.cases((forexperiment)))
View(forexperiment)
is.numeric(forexperiment$SEX)
is.numeric(forexperiment$MARITAL)
is.factor(forexperiment$MARITAL)
forexperiment$MARITAL = as.numeric(forexperiment$MARITAL)
is.numeric(forexperiment$MARITAL)
is.numeric(forexperiment$RACE)
is.numeric(forexperiment$DISTRICT)
forexperiment$DISTRICT = as.numeric(forexperiment$DISTRICT)
is.numeric(forexperiment$DISTRICT)
is.numeric(forexperiment$OCCUPATION.MAJOR.GROUP)
is.numeric(forexperiment$AGE.DIAGNOSED..YRS.)
forexperiment <- scale(forexperiment) #standardize var
experimentv3.2 <- forexperiment
View(experimentv3.2)
View(forexperiment)
kmeanv3.2 <- kmeans(experimentv3.2, 3)
aggregate(experimentv3.2,by=list(kmeanv3.2$cluster),FUN=mean)
#get cluster means
experimentv3.2 <- data.frame(experimentv3.2,kmeanv3.2$cluster)

#append cluster assignment

View(experimentv3.2)
table(experimentv3.2$kmeanv3.2.cluster)
clusplot(experimentv3.2, kmeanv3.2$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv3.2, kmeanv3.2$cluster)
write.xlsx(experimentv3.2, file = "mydata2w6.xlsx", sheetName =
"experimentv3.2", append = TRUE)
experimentv3.3 <- forexperiment
ls()
View(v)
View(x)
kmeanv3.3 <- kmeans(experimentv3.3, 3)
aggregate(experimentv3.3,by=list(kmeanv3.3$cluster),FUN=mean)
#get cluster means
experimentv3.3 <- data.frame(experimentv3.3,kmeanv3.3$cluster)
#append cluster assignment
View(experimentv3.3)
table(experimentv3.3$kmeanv3.3.cluster)
clusplot(experimentv3.3, kmeanv3.3$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv3.3, kmeanv3.3$cluster)
experimentv3.4 <- forexperiment
kmeanv3.4 <- kmeans(experimentv3.4, 3)
aggregate(experimentv3.4,by=list(kmeanv3.4$cluster),FUN=mean)
#get cluster means
experimentv3.4 <- data.frame(experimentv3.4,kmeanv3.4$cluster)
#append cluster assignment
View(experimentv3.4)
table(experimentv3.4$kmeanv3.4.cluster)
clusplot(experimentv3.4, kmeanv3.4$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv3.4, kmeanv3.4$cluster)
write.xlsx(experimentv3.3, file = "mydata2w6.xlsx", sheetName =
"experimentv3.3", append = TRUE)
write.xlsx(experimentv3.4, file = "mydata2w6.xlsx", sheetName =
"experimentv3.4", append = TRUE)
experimentv3.5 <- forexperiment
kmeanv3.5 <- kmeans(experimentv3.5, 3)
aggregate(experimentv3.5,by=list(kmeanv3.5$cluster),FUN=mean)
#get cluster means
experimentv3.5 <- data.frame(experimentv3.5,kmeanv3.5$cluster)

#append cluster assignment

View(experimentv3.5)
table(experimentv3.5$kmeanv3.5.cluster)
clusplot(experimentv3.5, kmeanv3.5$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv3.5, kmeanv3.5$cluster)
write.xlsx(experimentv3.5, file = "mydata2w6.xlsx", sheetName =
"experimentv3.5", append = TRUE)
experimentv3.6 <- forexperiment
kmeanv3.6 <- kmeans(experimentv3.6, 3)
aggregate(experimentv3.6,by=list(kmeanv3.6$cluster),FUN=mean)
#get cluster means
experimentv3.6 <- data.frame(experimentv3.6,kmeanv3.6$cluster)
#append cluster assignment
View(experimentv3.6)
table(experimentv3.6$kmeanv3.6.cluster)
clusplot(experimentv3.6, kmeanv3.6$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv3.6, kmeanv3.6$cluster)
write.xlsx(experimentv3.6, file = "mydata2w6.xlsx", sheetName =
"experimentv3.6", append = TRUE)
experimentv3.7 <- forexperiment
kmeanv3.7 <- kmeans(experimentv3.7, 3)
aggregate(experimentv3.7,by=list(kmeanv3.7$cluster),FUN=mean)
#get cluster means
experimentv3.7 <- data.frame(experimentv3.7,kmeanv3.7$cluster)
#append cluster assignment
View(experimentv3.7)
table(experimentv3.7$kmeanv3.7.cluster)
clusplot(experimentv3.7, kmeanv3.7$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv3.7, kmeanv3.7$cluster)
write.xlsx(experimentv3.7, file = "mydata2w6.xlsx", sheetName =
"experimentv3.7", append = TRUE)
experimentv3.8 <- forexperiment
kmeanv3.8 <- kmeans(experimentv3.8, 3)
aggregate(experimentv3.8,by=list(kmeanv3.8$cluster),FUN=mean)
#get cluster means
experimentv3.8 <- data.frame(experimentv3.8,kmeanv3.8$cluster)
#append cluster assignment
View(experimentv3.8)
table(experimentv3.8$kmeanv3.8.cluster)

clusplot(experimentv3.8, kmeanv3.8$cluster, color=TRUE,

shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv3.8, kmeanv3.8$cluster)
write.xlsx(experimentv3.8, file = "mydata2w6.xlsx", sheetName =
"experimentv3.8", append = TRUE)
experimentv3.9 <- forexperiment
kmeanv3.9 <- kmeans(experimentv3.9, 3)
aggregate(experimentv3.9,by=list(kmeanv3.9$cluster),FUN=mean)
#get cluster means
experimentv3.9 <- data.frame(experimentv3.9,kmeanv3.9$cluster)
#append cluster assignment
View(experimentv3.9)
table(experimentv3.9$kmeanv3.9.cluster)
clusplot(experimentv3.9, kmeanv3.9$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv3.9, kmeanv3.9$cluster)
write.xlsx(experimentv3.9, file = "mydata2w6.xlsx", sheetName =
"experimentv3.9", append = TRUE)
experimentv3.10 <- forexperiment
aggregate(experimentv3.10,by=list(kmeanv3.10$cluster),FUN=mean)
#get cluster means
kmeanv3.10 <- kmeans(experimentv3.10, 3)
aggregate(experimentv3.10,by=list(kmeanv3.10$cluster),FUN=mean)
#get cluster means
experimentv3.10 <- data.frame(experimentv3.10,kmeanv3.10$cluster)
#append cluster assignment
View(experimentv3.10)
table(experimentv3.10$kmeanv3.10.cluster)
clusplot(experimentv3.10, kmeanv3.10$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv3.10, kmeanv3.10$cluster)
write.xlsx(experimentv3.10, file = "mydata2w6.xlsx", sheetName =
"experimentv3.10", append = TRUE)
experimentv5.1 <- forexperiment
aggregate(experimentv5.1,by=list(kmeanv5.1$cluster),FUN=mean)
#get cluster means
kmeanv5.1 <- kmeans(experimentv5.1, 5)
aggregate(experimentv5.1,by=list(kmeanv5.1$cluster),FUN=mean)
#get cluster means
experimentv5.1 <- data.frame(experimentv5.1,kmeanv5.1$cluster)
#append cluster assignment
View(experimentv5.1)

table(experimentv5.1$kmeanv5.1.cluster)
clusplot(experimentv5.1, kmeanv5.1$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv5.1, kmeanv5.1$cluster)
write.xlsx(experimentv5.1, file = "mydata2w6.xlsx", sheetName =
"experimentv5.1", append = TRUE)
experimentv5.2 <- forexperiment
kmeanv5.2 <- kmeans(experimentv5.2, 5)
aggregate(experimentv5.2,by=list(kmeanv5.2$cluster),FUN=mean)
#get cluster means
experimentv5.2 <- data.frame(experimentv5.2,kmeanv5.2$cluster)
#append cluster assignment
View(experimentv5.2)
table(experimentv5.2$kmeanv5.2.cluster)
clusplot(experimentv5.2, kmeanv5.2$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv5.2, kmeanv5.2$cluster)
write.xlsx(experimentv5.2, file = "mydata2w6.xlsx", sheetName =
"experimentv5.2", append = TRUE)
experimentv5.3 <- forexperiment
kmeanv5.3 <- kmeans(experimentv5.3, 5)
aggregate(experimentv5.3,by=list(kmeanv5.3$cluster),FUN=mean)
#get cluster means
experimentv5.3 <- data.frame(experimentv5.3,kmeanv5.3$cluster)
#append cluster assignment
View(experimentv5.3)
table(experimentv5.3$kmeanv5.3.cluster)
clusplot(experimentv5.3, kmeanv5.3$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv5.3, kmeanv5.3$cluster)
write.xlsx(experimentv5.3, file = "mydata2w6.xlsx", sheetName =
"experimentv5.3", append = TRUE)
experimentv5.4 <- forexperiment
kmeanv5.4 <- kmeans(experimentv5.4, 5)
aggregate(experimentv5.4,by=list(kmeanv5.4$cluster),FUN=mean)
#get cluster means
experimentv5.4 <- data.frame(experimentv5.4,kmeanv5.4$cluster)
#append cluster assignment
View(experimentv5.4)
table(experimentv5.4$kmeanv5.4.cluster)
clusplot(experimentv5.4, kmeanv5.4$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions

plotcluster(experimentv5.4, kmeanv5.4$cluster)
write.xlsx(experimentv5.4, file = "mydata2w6.xlsx", sheetName =
"experimentv5.4", append = TRUE)
experimentv5.5 <- forexperiment
kmeanv5.5 <- kmeans(experimentv5.5, 5)
aggregate(experimentv5.5,by=list(kmeanv5.5$cluster),FUN=mean)
#get cluster means
experimentv5.5 <- data.frame(experimentv5.5,kmeanv5.5$cluster)
#append cluster assignment
View(experimentv5.5)
table(experimentv5.5$kmeanv5.5.cluster)
clusplot(experimentv5.5, kmeanv5.5$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv5.5, kmeanv5.5$cluster)
write.xlsx(experimentv5.5, file = "mydata2w6.xlsx", sheetName =
"experimentv5.5", append = TRUE)
experimentv5.6 <- forexperiment
kmeanv5.6 <- kmeans(experimentv5.6, 5)
aggregate(experimentv5.6,by=list(kmeanv5.6$cluster),FUN=mean)
#get cluster means
experimentv5.6 <- data.frame(experimentv5.6,kmeanv5.6$cluster)
#append cluster assignment
View(experimentv5.6)
table(experimentv5.6$kmeanv5.6.cluster)
clusplot(experimentv5.6, kmeanv5.6$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv5.6, kmeanv5.6$cluster)
write.xlsx(experimentv5.6, file = "mydata2w6.xlsx", sheetName =
"experimentv5.6", append = TRUE)
experimentv5.7 <- forexperiment
kmeanv5.7 <- kmeans(experimentv5.7, 5)
aggregate(experimentv5.7,by=list(kmeanv5.7$cluster),FUN=mean)
#get cluster means
experimentv5.7 <- data.frame(experimentv5.7,kmeanv5.7$cluster)
#append cluster assignment
View(experimentv5.7)
table(experimentv5.7$kmeanv5.7.cluster)
clusplot(experimentv5.7, kmeanv5.7$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv5.7, kmeanv5.7$cluster)
write.xlsx(experimentv5.7, file = "mydata2w6.xlsx", sheetName =
"experimentv5.7", append = TRUE)

write.xlsx(experimentv5.7, file = "mydata2w6.xlsx", sheetName =

"experimentv5.7", append = TRUE)
write.xlsx(experimentv5.1, file = "mydata2w6c5.xlsx", sheetName =
"experimentv5.1", append = FALSE)
write.xlsx(experimentv5.2, file = "mydata2w6c5.xlsx", sheetName =
"experimentv5.2", append = TRUE)
write.xlsx(experimentv5.3, file = "mydata2w6c5.xlsx", sheetName =
"experimentv5.3", append = TRUE)
write.xlsx(experimentv5.4, file = "mydata2w6c5.xlsx", sheetName =
"experimentv5.4", append = TRUE)
write.xlsx(experimentv5.5, file = "mydata2w6c5.xlsx", sheetName =
"experimentv5.5", append = TRUE)
write.xlsx(experimentv5.6, file = "mydata2w6c5.xlsx", sheetName =
"experimentv5.6", append = TRUE)
write.xlsx(experimentv5.7, file = "mydata2w6c5.xlsx", sheetName =
"experimentv5.7", append = TRUE)
experimentv5.8 <- forexperiment
kmeanv5.8 <- kmeans(experimentv5.8, 5)
aggregate(experimentv5.8,by=list(kmeanv5.8$cluster),FUN=mean)
#get cluster means
experimentv5.8 <- data.frame(experimentv5.8,kmeanv5.8$cluster)
#append cluster assignment
View(experimentv5.8)
table(experimentv5.8$kmeanv5.8.cluster)
clusplot(experimentv5.8, kmeanv5.8$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv5.8, kmeanv5.8$cluster)
write.xlsx(experimentv5.8, file = "mydata2w6c5.xlsx", sheetName =
"experimentv5.8", append = TRUE)
experimentv5.9 <- forexperiment
kmeanv5.9 <- kmeans(experimentv5.9, 5)
aggregate(experimentv5.9,by=list(kmeanv5.9$cluster),FUN=mean)
#get cluster means
experimentv5.9 <- data.frame(experimentv5.9,kmeanv5.9$cluster)
#append cluster assignment
View(experimentv5.9)
table(experimentv5.9$kmeanv5.9.cluster)
clusplot(experimentv5.9, kmeanv5.9$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv5.9, kmeanv5.9$cluster)
write.xlsx(experimentv5.9, file = "mydata2w6c5.xlsx", sheetName =
"experimentv5.9", append = TRUE)

experimentv5.10 <- forexperiment

kmeanv5.10 <- kmeans(experimentv5.10, 5)
aggregate(experimentv5.10,by=list(kmeanv5.10$cluster),FUN=mean)
#get cluster means
experimentv5.10 <- data.frame(experimentv5.10,kmeanv5.10$cluster)
#append cluster assignment
View(experimentv5.10)
table(experimentv5.10$kmeanv5.10.cluster)
clusplot(experimentv5.10, kmeanv5.10$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv5.10, kmeanv5.10$cluster)
write.xlsx(experimentv5.10, file = "mydata2w6c5.xlsx", sheetName =
"experimentv5.10", append = TRUE)
experimentv7.1 <- forexperiment
kmeanv7.1 <- kmeans(experimentv7.1, 7)
aggregate(experimentv7.1,by=list(kmeanv7.1$cluster),FUN=mean)
#get cluster means
experimentv7.1 <- data.frame(experimentv7.1,kmeanv7.1$cluster)
#append cluster assignment
View(experimentv7.1)
table(experimentv7.1$kmeanv7.1.cluster)
clusplot(experimentv7.1, kmeanv7.1$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv7.1, kmeanv7.1$cluster)
write.xlsx(experimentv7.1, file = "mydata2w6c7.xlsx", sheetName =
"experimentv7.1", append = FALSE)
experimentv7.2 <- forexperiment
kmeanv7.2 <- kmeans(experimentv7.2, 7)
aggregate(experimentv7.2,by=list(kmeanv7.2$cluster),FUN=mean)
#get cluster means
experimentv7.2 <- data.frame(experimentv7.2,kmeanv7.2$cluster)
#append cluster assignment
View(experimentv7.2)
table(experimentv7.2$kmeanv7.2.cluster)
clusplot(experimentv7.2, kmeanv7.2$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv7.2, kmeanv7.2$cluster)
write.xlsx(experimentv7.2, file = "mydata2w6c7.xlsx", sheetName =
"experimentv7.2", append = TRUE)
experimentv7.3 <- forexperiment
kmeanv7.3 <- kmeans(experimentv7.3, 7)
aggregate(experimentv7.3,by=list(kmeanv7.3$cluster),FUN=mean)

#get cluster means

experimentv7.3 <- data.frame(experimentv7.3,kmeanv7.3$cluster)
#append cluster assignment
View(experimentv7.3)
table(experimentv7.3$kmeanv7.3.cluster)
clusplot(experimentv7.3, kmeanv7.3$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv7.3, kmeanv7.3$cluster)
write.xlsx(experimentv7.3, file = "mydata2w6c7.xlsx", sheetName =
"experimentv7.3", append = TRUE)
experimentv7.3 <- forexperiment
ls
ls()
kmeanv7.3 <- kmeans(experimentv7.3, 7)
aggregate(experimentv7.3,by=list(kmeanv7.3$cluster),FUN=mean)
#get cluster means
View(experimentv7.3)
rm(experimentv7.3)
rm(kmeanv7.3)
experimentv7.3 <- forexperiment
kmeanv7.3 <- kmeans(experimentv7.3, 7)
aggregate(experimentv7.3,by=list(kmeanv7.3$cluster),FUN=mean)
#get cluster means
experimentv7.3 <- data.frame(experimentv7.3,kmeanv7.3$cluster)
#append cluster assignment
View(experimentv7.3)
table(experimentv7.3$kmeanv7.3.cluster)
clusplot(experimentv7.3, kmeanv7.3$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv7.3, kmeanv7.3$cluster)
write.xlsx(experimentv7.3, file = "mydata2w6c7.xlsx", sheetName =
"experimentv7.3", append = TRUE)
experimentv7.4 <- forexperiment
kmeanv7.4 <- kmeans(experimentv7.4, 7)
aggregate(experimentv7.4,by=list(kmeanv7.4$cluster),FUN=mean)
#get cluster means
experimentv7.4 <- data.frame(experimentv7.4,kmeanv7.4$cluster)
#append cluster assignment
View(experimentv7.4)
table(experimentv7.4$kmeanv7.4.cluster)
clusplot(experimentv7.4, kmeanv7.4$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions

plotcluster(experimentv7.4, kmeanv7.4$cluster)
write.xlsx(experimentv7.4, file = "mydata2w6c7.xlsx", sheetName =
"experimentv7.4", append = TRUE)
experimentv7.5 <- forexperiment
kmeanv7.5 <- kmeans(experimentv7.5, 7)
aggregate(experimentv7.5,by=list(kmeanv7.5$cluster),FUN=mean)
#get cluster means
experimentv7.5 <- data.frame(experimentv7.5,kmeanv7.5$cluster)
#append cluster assignment
View(experimentv7.5)
table(experimentv7.5$kmeanv7.5.cluster)
clusplot(experimentv7.5, kmeanv7.5$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv7.5, kmeanv7.5$cluster)
write.xlsx(experimentv7.5, file = "mydata2w6c7.xlsx", sheetName =
"experimentv7.5", append = TRUE)
experimentv7.6 <- forexperiment
kmeanv7.6 <- kmeans(experimentv7.6, 7)
aggregate(experimentv7.6,by=list(kmeanv7.6$cluster),FUN=mean)
#get cluster means
experimentv7.6 <- data.frame(experimentv7.6,kmeanv7.6$cluster)
#append cluster assignment
View(experimentv7.6)
table(experimentv7.6$kmeanv7.6.cluster)
clusplot(experimentv7.6, kmeanv7.6$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv7.6, kmeanv7.6$cluster)
write.xlsx(experimentv7.6, file = "mydata2w6c7.xlsx", sheetName =
"experimentv7.6", append = TRUE)
experimentv7.7 <- forexperiment
kmeanv7.7 <- kmeans(experimentv7.7, 7)
aggregate(experimentv7.7,by=list(kmeanv7.7$cluster),FUN=mean)
#get cluster means
experimentv7.7 <- data.frame(experimentv7.7,kmeanv7.7$cluster)
#append cluster assignment
View(experimentv7.7)
table(experimentv7.7$kmeanv7.7.cluster)
clusplot(experimentv7.7, kmeanv7.7$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv7.7, kmeanv7.7$cluster)
write.xlsx(experimentv7.7, file = "mydata2w6c7.xlsx", sheetName =
"experimentv7.7", append = TRUE)

experimentv7.8 <- forexperiment

kmeanv7.8 <- kmeans(experimentv7.8, 7)
aggregate(experimentv7.8,by=list(kmeanv7.8$cluster),FUN=mean)
#get cluster means
experimentv7.8 <- data.frame(experimentv7.8,kmeanv7.8$cluster)
#append cluster assignment
View(experimentv7.8)
table(experimentv7.8$kmeanv7.8.cluster)
clusplot(experimentv7.8, kmeanv7.8$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv7.8, kmeanv7.8$cluster)
write.xlsx(experimentv7.8, file = "mydata2w6c7.xlsx", sheetName =
"experimentv7.8", append = TRUE)
experimentv7.9 <- forexperiment
kmeanv7.9 <- kmeans(experimentv7.9, 7)
aggregate(experimentv7.9,by=list(kmeanv7.9$cluster),FUN=mean)
#get cluster means
experimentv7.9 <- data.frame(experimentv7.9,kmeanv7.9$cluster)
#append cluster assignment
View(experimentv7.9)
table(experimentv7.9$kmeanv7.9.cluster)
clusplot(experimentv7.9, kmeanv7.9$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv7.9, kmeanv7.9$cluster)
write.xlsx(experimentv7.9, file = "mydata2w6c7.xlsx", sheetName =
"experimentv7.9", append = TRUE)
experimentv7.10 <- forexperiment
kmeanv7.10 <- kmeans(experimentv7.10, 7)
aggregate(experimentv7.10,by=list(kmeanv7.10$cluster),FUN=mean)
#get cluster means
experimentv7.10 <- data.frame(experimentv7.10,kmeanv7.10$cluster)
#append cluster assignment
View(experimentv7.10)
table(experimentv7.10$kmeanv7.10.cluster)
clusplot(experimentv7.10, kmeanv7.10$cluster, color=TRUE,
shade=TRUE,labels=2, lines=0) #plotting cluster solutions
plotcluster(experimentv7.10, kmeanv7.10$cluster)
write.xlsx(experimentv7.10, file = "mydata2w6c7.xlsx", sheetName =
"experimentv7.10", append = TRUE)
ls()
fit.km$centers
View(fit.km)

fit.kmcentres <- fit.km$centres

View(fit.kmcentres)
fit.kmcenters <- fit.km$centers
View(fit.kmcenters)
unscale(fit.kmcenters)
fit.kmcentersunscale <- unscale(fit.kmcenters)
newunscale <- unscale(fit.kmcenters, fit.kmcenters)
install.packages("fields")
library("fields",
lib.loc="/Library/Frameworks/R.framework/Versions/3.3/Resou
rces/library")
newunscale <- unscale(fit.kmcenters, fit.kmcenters)
ls()
View(mydata2w6)
View(mydata1w6)
savehistory("~/Desktop/History R.Rhistory")