MikeConlon

UniversityofFlorida
mconlon@ufl.edu
AndtheVIVOCollaboration
 TheGoal
Improveallofsciencebyprovidingthemeansforsharingand
usingcurrent,accurateandpreciseinformationregarding
scientistsinterests,activitiesandaccomplishments
NationalNetworkingofScientists
N i lN ki fS i i
$12.3M2yearARRA/NCRRaward U24RR029822,9/25/2009
Sevenschools
ExtendVIVOsoftwarefromCornelltoprovideinformationby
scientistsforscientists
Fosterteamsciencebyprovidingtoolsforidentifyingpotential
collaborators
Improvecollaborationbycreatingtoolsusingthisinformation
forenhancingnewandexistingteams
Facilitatethescienceofteamscience
Facilitate the science of team science
VIVOSoftware
DevelopedatCornellin2004
Findfacultybyinterests,activities,
accomplishments
Release0.9tosevenschools
Standardontology
Localsearch
Release1.o,opensource
April14,2010
LinkedOpenData
ReleaseSummer2010
Networksearch
Ingestinterfaces
ReleaseFall2010
Federatedidentity
Grouping
p g
VIVOatCornell:http://vivo.cornell.edu
FutureApplication FindScientists

Semanticsearchfindsonlyitemsofinterest
FutureApplication UnderstandCollaborations
FutureApplication RouteInformation
FutureApplication SimplifyTasks
InformationinVIVOcanbe
usedtocreate
Biosketches
Vitas
Annualreports
Departmentandresearch
groupwebsites
Information
Informationcanbeusedto
can be used to
populateprofilesin
collaborativetools, portals,
wikis,
iki
 HowtheNationalNetworkworks:
Structured Information Architecture
StructuredInformationArchitecture

Ontologies FederatedIdentityManagement
FOAF,BIBO,MESH,
FOAF BIBO MESH SAML2.0,Shibboleth,
SAML 2 0 Shibb l h
SemanticWeb Interoperability
RDF,RDFS,OWL,SPARQL, Identity,Semantics,Applications
 InstitutionalArchitecture
ThreesourcesofVIVOinformation
Userdata
User data
Institutionaldata
Providerdata
Two formats for output
Twoformatsforoutput
WebPagesforusers
ResourceDescriptionFramework
for applications
forapplications
NationalArchitecture
Enabling Applications
EnablingApplications
Search CollaborativeGroups
RegionalPortal Reporting
CrowdSourcing Documents
WorkBench SocietyPortal
NetworkAnalysis InformationRouting
ActivityPortal Timebasedanalysis
y
Facultywebsites IDcrosswalk
NationalNetworkingTeam
UniversityofFlorida,Gainesville,FL
C
CornellUniversity,Ithaca,NY
ll U i it Ith NY
PonceMedicalSchool,Ponce,PR
Indiana University Bloomington IN
IndianaUniversity,Bloomington,IN
WashingtonUniversity,StLouis,MO
Weill Cornell Medical College NY NY
WeillCornellMedicalCollege,NY,NY
TheScrippsResearchInstitute,LaJolla,CA
CollaborationandCoordination
PublishersandAggregators Elsevier,ThomsonReuters,
ORCID,Collexis,InformationToday,CiteSeer,Arxiv,
Ontology
O t l E l I BIBO FOAF UCSF
EagleI,BIBO,FOAF,UCSF,
Federalagencies OSTP,NIH,NSF,VA,USDA,
SearchProviders Google,Bing,Yahoo,
ProfessionalSocieties AAAS,
SemanticWebcommunity DERI,TimBernersLee,
MyExperiment, ConceptWeb, Linked Data,
MyExperiment,ConceptWeb,LinkedData,
SchoolsandConsortia SURA,CTSA,CIC,CBC,HubZero,
FLR,dozensofindividualschools
Existingapplicationandserviceproviders
Existing application and service providers over100
over 100
Sustainability
Informationisinstitutionallyhostedand
maintainedtobenefittheinstitutionandits
scientists
VIVOsoftwareandontologyisopensource,
community maintained
communitymaintained
Nationalnetworkapplicationscanbecommercial
p
oropensource
Institutionsmayuseopensource,commercial
versionsofVIVO,orotherplatformsthatprovide
data to the national network
datatothenationalnetwork
ProjectStatus
Development Interfaces,ingest,packagingatUF,
ontologyandvisualizationatIndiana,semantic
web,userexperienceatCornell.Version1.0:
b ll
opensource,linkeddata,April14,2010
Implementation Fivesiteshaveversion1.0in
Five sites have version 1 0 in
production.Trainingmaterials,documentation
q
Outreach Presentations,inquiries,collaboration
Governance TAB,SAB,EAB
Evaluation SixMonthreview;WashingtonUniv.
Visit www.vivoweb.org
VIVOCollaboration
CornellUniversity:DeanKrafft(CornellPI),Manolo Bevia,JimBlake,NickCappadona,Brian
Caruso, Jon CorsonRikert,
Caruso,JonCorson Rikert,Elly
Elly Cramer,MedhaDevare,ElizabethHines,HudaKhan,BrianLowe,
Cramer, Medha Devare, Elizabeth Hines, Huda Khan, Brian Lowe,
JosephMcEnerney,HollyMistlebauer,StellaMitchell,Anup Sawant,ChristopherWestling,
RebeccaYounes.UniversityofFlorida:MikeConlon(VIVOandUFPI),ChrisBarnes,CeciliaBotero,
KerryBritt,ErinBrooks,AmyBuhler,EllieBushhousen,LindaButson,ChrisCase,ChristineCogar,
Valrie Davis,MaryEdwards,NitaFerree,GeorgeHack,ChrisHaines,RaeJesano,Margeaux
Johnson, Sara Kreinest, Meghan Latorre, Yang Li, Paula Markes, Hannah Norton, Narayan Raum,
Johnson,SaraKreinest,MeghanLatorre,YangLi,PaulaMarkes,HannahNorton,Narayan Raum,
AlexanderRockwell,SaraRussellGonzalez,NancySchaefer,DaleScheppler,NicholasSkaggs,
MatthewTedder,MicheleR.Tennant,AliciaTurner,StephenWilliams. IndianaUniversity:Katy
Borner(IUPI),Kavitha Chandrasekar,BinChen,Shanshan Chen,Jeni Coffey,Suresh
Deivasigamani,YingDing,RussellDuhon,JonDunn,Poornima Gopinath,JulieHardesty,Brian
Keese, Namrata Lele,MicahLinnemeier,NianliMa,RobertH.McDonald,Asik
Keese,Namrata Lele, Micah Linnemeier, Nianli Ma, Robert H. McDonald, Asik Pradhan Gongaju,
Gongaju,
MarkPrice,Yuyin Sun,Chintan Tank,AlanWalsh,BrianWheeler,Feng Wu,AngelaZoss. Ponce
SchoolofMedicine:RichardJ.Noel,Jr.(PoncePI),RicardoEspada Colon,Damaris TorresCruz,
MichaelVegaNegrn. TheScrippsResearchInstitute:GeraldJoyce(ScrippsPI),CatherineDunn,
BrantKelley,PaulaKing, AngelaMurrell,BarbaraNoble,CaryThomas,Michaeleen
Trimarchi. WashingtonUniversitySchoolofMedicineinSt.Louis:Rakesh
Washington University School of Medicine in St. Louis: Rakesh Nagarajan (WUSTLPI),
(WUSTL PI),
KristiL.Holmes,Caerie Houchins,GeorgeJoseph,Sunita B.Koul,LeslieD.McIntosh. WeillCornell
MedicalCollege:CurtisCole(WeillPI),PaulAlbert,VictorBrodsky,MarkBronnimann,Adam
Cheriff,OscarCruz,DanDickinson,RichardHu,ChrisHuang,Itay Klaz,KennethLee,Peter
Michelini,GraceMigliorisi,JohnRuffing,JasonSpecland,Tru Tran,Vinay Varughese,VirgilWong.

ThisprojectisfundedbytheNationalInstitutesofHealth,U24RR029822,"VIVO:Enabling
NationalNetworkingofScientists".
 The First Annual
VIVO National Conference

August
g 12 & 13, 2010
New York Hall of Science

http://vivoweb.org/conference

VIVO: Enabling National Networking of Scientists

is supported by NIH Award U24 RR029822.