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Article history:
Received 16 May 2015
Received in revised form 29 October 2015
Accepted 1 November 2015
Keywords:
Biosecurity
Porcine epidemic diarrhea
Risk factor
Swine
Transmission
Japan
a b s t r a c t
Porcine epidemic diarrhea (PED) is an emerging disease of pigs that has recently led to large numbers
of piglet deaths in a number of countries of Eastern Asia and The Americas. The objective of the present
study was to identify and compare risk factors associated with PED infection in locally and non-locally
PED-exposed farms in Japan. A questionnaire was administered to a convenience selection of pig farms
located throughout Japan. Questionnaires were administered between November 2013 (when the rst
case was reported in Japan) and August 2014. PED-positive farms (cases, n = 124) were asked to provide
information on their status (positive or negative) and select herd management practices for the two weeks
prior to onset of PED clinical signs. Negative farms (controls, n = 128) were given the same questionnaire
and asked herd management practices for the two weeks prior to a given reference date. This date was
assigned based on the date of PED occurrence in the town/prefecture in which the farm was located.
Case and control farms were categorized as locally exposed if they were located within a 5 km radius
from a PED-infected farm and non-locally exposed, otherwise. Logistic regression analysis was used to
identify factors associated with PED infection. Two separate regressions were done for locally exposed
and non-locally exposed farms using PED status (positive/negative) as the dependent variable. PED in
locally-exposed farms was associated (P < 0.05) with increased farm size (in 100 pig increments), shorter
distances to the closest PED-positive farm (less than1,001 m), and a disinfectant contact time of less
than 20 min. In non-locally exposed farms, PED was associated (P < 0.05) with increased feed truck visits
to the farm, no visit of the veterinarian, and again a disinfectant contact time of less than 20 min. These
ndings suggest that the mechanisms of PED spread in Japan were different for farms closer to case-farms
compared to farms that were further away from PED cases. These results will contribute to understanding
the epidemiology of the disease in Japan and will ultimately aid in designing and implementing effective
prevention and control strategies in Japan and other regions epidemically infected by the PED virus.
2015 Elsevier B.V. All rights reserved.
1. Introduction
Porcine epidemic diarrhea virus (PEDv) is an enveloped, singlestranded, positive-sense RNA virus of the genus Alphacoronavirinae
in the family Coronaviridae that is related to the transmissible gastroenteritis (TGE) virus (Hofmann and Wyler, 1989; Saif et al.,
2012). The PEDv emerged as a global threat to the swine industry in
2013, when a number of epidemics were reported in many important swine-producing countries of North America and Eastern Asia
that were previously believed to be PEDv-free. These countries
included US, Canada, and Mexico, including Korea, Taiwan, and
Japan (Cima, 2013; More, 2013; Stevenson et al., 2013; Chen et al.,
2014; Park et al., 2014; Hanke et al., 2015; Song et al., 2015). PEDv
infection results in high morbidity and high mortality in <10 days
old piglets, and decreased growth performance for those that survive infection (Huang et al., 2013; Mole, 2013; Stevenson et al.,
2013; Alvarez et al., 2015b). PED was rst reported in Japan in
the 1990s, and a PED live vaccine was approved in 1996 (Sueyoshi
et al., 1995). Since then, only isolated and relatively unimportant
162
163
Table 1
Variables and denition used for the analysis.
Item
Farm information
Total number of pigs
Production system
Distance from closest PED-positive farm
Pig movement
Pig addition
Pig removal
Use of own/borrowed equipment
Yes/No (Farms added/did not add any type of pigs into the farm)
Yes/No (Farms removed/did not remove any type of pigs into the farm)
Yes/No (Farms borrowed/did not borrow equipment from another swine farm)
Feed
Visit of feed truck
Articial milk
Site visitors
Rendering truck
Veterinarian
Other visitor
Manure application
Biosecurity practices
For personnel and employees
Loading place
Contact time
Disease status
Disease status
Vaccine program
164
Table 2
Number of PED-positive and -negative farms in locally exposed and non-locally exposed farms stratied by production type and proximity to PED-positive farms.
Locally exposed farms
Positive
Negative
Positive
Negative
107
21
9
62.6%
57.1%
66.6%
37.4%
42.9%
33.3%
85
20
7
3
35.3%
25.0%
57.1%
0%
64.7%
75.0%
42.9%
100.0%
10,00120,000 m
20,000 m or more
84.4%
80.0%
68.2%
38.9%
44.4%
15.6%
20.0%
31.8%
61.1%
55.6%
25
25
65
44.0%
32.0%
30.8%
56.0%
68.0%
69.2%
62.0%
38.0%
115
33.9%
66.1%
Production type
Farrow-to-nish
Farrow-to-wean
Wean-to-nish
Nucleus
137
165
Table 3
Bivariate association between PED in locally exposed and non-locally exposed farms and factors hypothesized to inuence that risk in Japan.
Locally exposed farms
Item
P-value
P-value
Farm information
Total number of pigs
Production system
Distance from closest PED-positive farm
137
137
137
0.014
NS
0.002
115
115
115
0.160
NS
NS
Pig movement
Pig addition
Pig removal
Use of own/borrowed equipment
137
137
137
NS
NS
NS
115
115
115
0.037
NS
NS
137
117
0.170
0.070
115
104
0.001
0.047
137
137
137
137
0.222
NS
NS
0.218
115
115
115
115
NS
0.047
NS
NS
Biosecurity practices
For personnel and employees
For business visitors
Pests and wildlife
137
137
137
NS
NS
NS
115
115
115
0.041
0.226
NS
137
137
137
NS
NS
0.057
115
115
115
0.148
NS
0.050
Disease status
Disease status
Vaccine program
137
137
0.125
NS
115
115
NS
0.094
Feed
Visit of feed truck
Articial milk
Site visitors
Rendering truck
Veterinarian
Other visitor
Manure application
Table 4
Multivariable association between PED in locally exposed farms and factors hypothesized to inuence that risk in Japan.
Item
PED positive%
P-value
137
0.002
0.001
1.027 (1.0191.036)
32
20
22
18
45
84.4
80.0
66.7
42.1
53.1
Contact time (Allow/Not allow disinfectant a contact time of more than 20 min)
42
50.0
Yes
95
67.4
No
11.687 (11.59011.785)
6.451 (1.66025.066)
3.470 (1.08111.139)
NS
Reference
0.003
Reference
2.748 (1.1076.828)
Table 5
Multivariable association between PED in non-locally exposed farms and factors hypothesized to inuence that risk in Japan.
Item
PED positive%
P-value
Oddsratio (95%CI)
115
0.001
1.159 (1.0651.262)
Visit of veterinarians
Yes
No
38
77
21.1
40.3
0.026
0.309 (0.1110.860)
Reference
22.7
40.8
0.043
Reference
2.632 (1.0426.645)
Contact time (Allow/Not allow disinfectant a contact time of more than 20 min)
44
Yes
71
No
occurrence of PED (King et al., 1998). Indeed, PCR analysis of spraydried porcine plasma imported to Japan from March to May 2014
revealed that a large proportion of the reduced number of samples tested (7/8) were positive, although a bioassay on nursery
pigs was negative (Ministry of Agriculture, Forestry and Fisheries of
Japan, 2014b). Given the limited sensitivity of the bioassay, negative results cannot be considered as a proof of the lack of association
between feed and disease (Gerber et al., 2014; Opriessnig et al.,
166
2014; Pasick et al., 2014; Pujols and Segals, 2014; Bowman et al.,
2015). Although PCR-positive results demonstrate that feed was
contaminated with viral RNA, it is unclear whether the virus would
still be infectious.
Production system was not related to PED occurrence in both
locally-exposed and non-locally exposed farms suggesting that all
farm types were at similar risk of being PED-infected. However, it
may well be that some wean-to-nish operations may have failed
to identify PED-like signs because those signs may not be as evident
in older pigs. Earlier studies reported that there is an age-dependent
resistance to pathogenic PED virus infection in pigs (Shibata et al.,
2000). Clinically silent nishing pigs shipped into slaughter plants
were strongly suspected to transmit PED in Japan.
Proximity to infected neighboring farms in addition to other
management factors including biosecurity practices and herd size
have been already identied as important factors associated with
an increased risk of infection at the farm level in other important
swine diseases such as PRRS (Mortensen et al., 2002; Lambert et al.,
2012; Velasova et al., 2012). Our results, on the other hand, suggest
that the mechanisms for PED spread in Japan were different for
farms nearer to previously infected farms, compared to those that
were further, something difcult to assess in the case of a widely
distributed disease as PRRS. Results stress the need for changing
and adapting biosecurity practices consistently with the circumstances of PED spread. Our results must be interpreted with caution
given potential biases associated with our reference population
(JASP farms) compared with the whole Japanese swine population
and our sample size, that could limit our ability to detect significant risk factors. Still, we are not aware of any systematic bias
in JASP farms with regards to non-JASP farms and, to our knowledge, this is the rst time that risk factors associated with risk of
disease in farms locally exposed are compared with those of nonlocally exposed in the midst of a PED epidemic. These results could
contribute to understanding the epidemiology of the disease in the
country and, ultimately, to design and implement effective prevention and control strategies in Japan and other regions epidemically
infected by the PED virus.
Conict of interest
None of the authors of this paper has a nancial or personal
relationship with other people or organizations that could inappropriately inuence or bias the content of the paper.
Acknowledgments
The authors gratefully thank the cooperative producers for completing the questionnaires and providing their data for use in the
present study, and the veterinarians and staff at the Japan Association of Swine Practitioners for their assistance. This work was
supported by a KAKENHI(Grants-in-Aid for Scientic Research)
from the Japan Society for the Promotion of Science (No. 26870454).
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