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in Pharmacogenomics
by
Submitted to
on
February 2017
Contents
Introduction 3
Scientific Background 4
Human Genome Project 5
Ethical Issues 5
Genetic Discrimination 5
Stigmatization 7
Privacy and Confidentiality 7
Balancing Harms and Benefits 8
Legal Issues 9
Informed Consent 9
Ownership of Data and/or Samples 10
Intellectual Property 12
Disclosure Obligations and
Reporting Requirements 13
Social Issues 15
Race and Ethnicity 15
Testing in Vulnerable Populations 16
Availability of Testing 17
Knowledge and Education of
Health Care Professionals 18
Conclusions 19
Bibliography 20
Introduction
2
field of pharmacogenetics and pharmacogenomics has rapidly
developed with the intent of individualizing therapy to maximize
efficacy and minimize toxicity. There are many challenges and
barriers that impact the implementation of pharmacogenomics
into clinical practice. These include ethical, legal, and social
issues that highlight risk, benefit, and public and professional
acceptance.
3
Scientific Background
4
Integration of pharmacogenomics into clinical practice is
most promising in fields where few therapies exist, where existing
therapies have a narrow therapeutic index or where the risk-
benefit ratio of these therapies is high. For example, genotyping
for mutations in the gene coding for thiopurine methyltransferase
(TPMT), an enzyme that detoxifies drugs used in the treatment of
leukemia, can prevent adverse reactions associated with their
use. Pharmacogenomics can also be used to make crucial
decisions in drug development when proceeding from one phase
of a clinical trial to the next, more expensive, phase.
Ethical Issues
Genetic Discrimination
5
disorder or genetic polymorphism, is treated differently by his or
her employer or insurance company. Knowledge of genetic and/or
pharmacogenomic information may be used to deny, limit, or
cancel health insurance. There is suggestion that health insurers
should have limited access to such information. Insurers would be
able to use pharmacogenomic information for drug formulary
management, but should be prohibited from using the same
information in determining copayments or premiums, or
negotiating contracts.
6
disability, mortgage, and auto insurance. Seven cases involved
employment in areas relating to hiring, termination, promotion,
and transfer. Due to the fear of discrimination, the authors also
noted that respondents either withheld mentioning such
information to health care providers, insurers, and employers or
provided incomplete or dishonest information on insurance
application forms.
Stigmatization
7
concerned about security and loss of privacy. The capacity for
such information to be adequately stored and rapidly
disseminated and the relative ease of accessibility all pose a risk
for a loss of privacy. Examples of methods to ensure privacy
include use of de-identified subject data, use of password-
protected and/or encrypted files, and limiting access. Additionally,
in the United States, federal legislation such as the Health
Insurance Portability and Accountability Act (HIPAA) and private
sector self-regulation exists.
8
individuals, or society as a whole. Pharmacogenomic research
includes the potential for physical risk and negative psychological
impact. The physical risks are related to using a drug in which the
drug itself has the potential to cause harms such as intolerable
side effects. The psychological impact may include being
excluded from enrolling in a clinical study if the individual does
not have the genetic polymorphism or genotype, which may lead
to despair if other treatments have failed or are not available.
Legal Issues
Informed Consent
With genetic testing, the DNA collected will not just include
the known genetic polymorphisms obtained from participating in
a research study but may also include information about the
individual's entire genome. As a result, these DNA samples could
provide invaluable information about not only the participant but
9
also possibly his or her extended family, which could be entirely
unrelated to the original study. Typically, such additional
information would not be revealed to the original participants but
rather be used in an anonymous fashion. However, this possibility
should be discussed up front as part of obtaining informed
consent. Although future use of such data may not be known at
the time of consent, specific language should be described in the
informed consent form. Consideration of using narrow or broad
terminology may be appropriate to help participants understand
how their information may be used.
10
suggest that such information be kept separate from the patient's
medical record. Our own experience has been that some
institutional review boards (IRBs) do not recommend consent
forms (for studies where genetic testing is to be done) to be
placed in the medical record. Rather, such information should be
kept in a file by both the investigator and the IRB. This attempts
to ensure privacy by avoiding inadvertent disclosure of such
information to anyone reviewing the patient's medical chart.
11
In the Moore v Regents of the University of California case,
the plaintiff sued the defendant claiming deprivation of property
interest, lack of adequate informed consent, and breach of
fiduciary duty. Mr Moore's biological specimens were collected by
the defendant's physician for a research project. Unknown to the
patient, the results of the research led to a patent application by
the defendant. The state court ruled that Mr Moore did not retain
the right of ownership of his biological specimen that was used to
develop a new therapy/product. In addition, the court also noted
that disclosure to the patient of additional research or economic
interests was necessary.
Intellectual Property
12
biological processes, they exist to be discovered and not
invented. In contrast, such an argument is considered
unpersuasive since isolating DNA does not occur naturally and
that the patent system has long recognized useful applications of
discoveries as inventions. In Diamond v Chakrabarty, the US
Supreme Court ruled that genetically engineered bacteria were
subject to patent protection as they did not occur in nature.
Although the genes themselves are not patentable, patent
protection is allowable under the auspices of DNA that is
modified, purified, or isolated resulting in a form that is
nonexistent in nature.
13
in publically available databases such as GenBank and the
International HapMap Project will also provide researchers access
and the ability to analyze genes associated with disease.
14
examined. Among physicians, agreement was noted regarding the
obligation to disclose ancillary information. Interestingly,
geneticists believed that disclosure was not always necessary due
to the complexities of genetic risk results.
Social Issues
15
is responsible for the metabolism of numerous drugs, including
proton pump inhibitors (PPIs), tricyclic antidepressants,
diazepam, and antiplatelet therapies (e.g., clopidogrel). At least
27 CYP2C19 variant alleles have been identified, with a higher
prevalence of the CYP2C19*2 and CYP2C19*3 variants observed
in Asians versus Caucasians and African Americans. These variant
alleles result in a functional loss of CYP2C19enzyme activity. This
may be of clinical significance regarding PPI efficacy as
pharmacokinetic variability and Helicobactor pylori eradication
rates are attributed, in part, to CYP2C19 genetic polymorphisms.
In several studies, H. pylori eradication rates were reported to be
higher in Asians.
16
resulting in genetic discrimination and stigmatization. With known
health disparities regarding access to medical care among ethnic
groups, there is concern that there will also be limited
accessibility to pharmacogenomic testing. Regarding drug
development and research, the population prevalence for certain
genetic polymorphisms may result in the use of race as a primary
criterion for participation in pharmacogenomic research. Although
the passage of the National Revitalization Act of 1993 mandated
inclusion of racially identified groups into research, theoretically,
drug development may compromise the availability and access to
pharmacogenomic testing and/or research in ethnic groups
among industrialized and nonindustrialized countries. However,
new guidelines, procedures, and practices are in development for
engaging with the scientific community that offer opportunities to
bridge the gap between genomic science and indigenous and/or
developing communities.
17
negative effects of participation in research is to use both consent
and assent. Research protocols recognize that children should
participate and want to participate in important decisions about
their lives when developmentally appropriate, and that if they are
too young to consent, their assent should be obtained. In a
pediatric research setting, the decision-making process regarding
subject participation is more complex than when working with an
adult population. It is generally accepted that children do not
have the maturity or experience necessary to make an informed
decision regarding their participation and therefore should include
the input of a parent or adult guardian, the child (when
appropriate), and the researcher. The input of the researcher may
be particularly useful when determining the medical benefits and
risks of the child's research participation. This is helpful because
parents may find it difficult to weigh the possible advantages and
disadvantages of their child's participation in pharmacogenomics
research.
Availability of Testing
18
A major barrier to implementing pharmacogenomics into
clinical practice is the availability of pharmacogenomic testing. In
one study, questionnaires were sent to 629 individuals
representing hospitals, laboratories, and universities throughout
New Zealand and Australia. The objective of the study was to
determine utilization rates of pharmacogenomic testing for drug
metabolizing enzymes. The results reported that 2% of
respondents had genotyping tests available. In another study,
poor availability of 20% was reported in North America medical
practices for warfarin pharmacogenomic testing.
19
interpreting test results. Approximately one third of respondents
correctly answered the knowledge-based questions. In an
Internet-based survey of genetics education in psychiatry
residency programs, more than 50% of respondents felt that their
training in pharmacogenomics was minimal. A recent systematic
review also concluded similar findings that health care
professionals generally felt limited in their knowledge of
pharmacogenomics. The lack of knowledge in pharmacogenomics
is also consistent among pharmacy, medical, and nursing
students.
20
Conclusions
21
Bibliography
Bertino, J., Kashuba, A., Ma, J., Fuhr, U., & DeVane, C. (2012).
Pharmacogenomics An Introduction and Clinical Perspective
(1st ed.). McGraw-Hill Education / Medical.
22