Академический Документы
Профессиональный Документы
Культура Документы
by
Roland Meyer
Doctor of Philosophy
in Chemistry
To my parents
Table of Contents
Acknowledgements ......................................................................................................ix
List of Publications........................................................................................................x
List of Acronyms..........................................................................................................xi
Chapter 1 Introduction
1.1 Scopeofthethesis ........................................................................................................................................... 3
1.1.1 Summaryandaims................................................................................................................................. 3
1.2 Freeradicals,andtheirimportanceinbiologicalsystems............................................................. 5
1.3 Antioxidantdefensesystems:Anoverview.......................................................................................... 6
1.4 Lowmolecularweightchainbreakingantioxidantsinandassociatedwithlipids ............ 7
1.4.1 VitaminE .................................................................................................................................................... 8
1.4.2 VitaminC ..................................................................................................................................................12
1.5 Experimentalapproachestoelucidateantioxidantaction ..........................................................13
1.5.1 DBOasafluorescentprobeforantioxidants ............................................................................15
1.5.1.1 FluorazophoreL:AlipidsolubleDBOderivative ..............................................................17
1.5.1.2 SynthesisofFluorazophoreL .....................................................................................................18
1.6 DBOanditsderivativesasfluorescentprobesinthedeterminationofantioxidant
action.....................................................................................................................................................................20
1.6.1 QuenchingofFluorazophoreLbyvitaminC ............................................................................21
1.6.2 QuenchingofFluorazophoreLbyvitaminE............................................................................22
viii
References ............................................................................................... 65
Chapter 5 Appendix
AppendixI:HowtoperformaglobalfittodetermineDL .......................................................................... 73
Appendix II: Article, Journal of the American Chemical Society.....................................................79
Appendix III: Article, Photochemical & Photobiological Sciences ................................................111
Appendix IV: Article, Langmuir......................................................................................................119
AppendixV:Lebenslauf..........................................................................................................................................127
ix
Acknowledgements
I would like to express my gratitude to my supervisor Prof. Dr. Werner M. Nau, who
took a wayward biologist under his wing and allowed him to delve into the
fascinating world of photochemistry. Without his ideas, capable guidance, constant
support and many fruitful discussions this thesis would not have been possible.
I would like to thank Prof. Dr. Mathias Winterhalter and Prof. Dr. Detlef Gabel for
their participation as co-referees.
I am grateful to the members of the Nau workgroup, both past and present, for a
dynamic, friendly, and enjoyable atmosphere. In particular I would like to thank Dr.
Harekrushna Sahoo for all the knowledge regarding instrumentation and
methodology he passed on to me and Thomas Schwarzlose for helping me out with
the synthetic procedures, and for supplying most of the raw materials used in my
experiments. I am grateful to Dr. Andreas Sonnen for introducing me to the global
fitting procedures and the lifetime measurements for lateral diffusion, and to Anja
Mller for working with me in the framework of the industry project. I also thank
Roy DSouza for his tireless help with the more artistic endeavors in order to provide
good-looking figures and schemes.
I am indebted to Prof. Dr. Porter who chose to include our workgroup in his analysis
of the synthetic antioxidant N-tocopherol.
I would like to thank the workgroups of Prof. Dr. Schwaneberg for their support in
measuring multiplates and in handling biological waste, and of Prof. Dr. Winterhalter
for allowing me to perform light-scattering and differential scanning calorimetry
measurements with their instruments.
List of Publications
T. Nam, C. L. Rector, H. Kim, A. F.-P. Sonnen, R. Meyer, W. M. Nau, J.
Atkinson, J. Rintoul, D. A. Pratt, N. A. Porter, Tetrahydro-1,8-naphthyridinol
Analogues of -Tocopherol as Antioxidants in Lipid Membranes and Low-Density
Lipoproteins, J. Am. Chem. Soc. 2007, 129, 10211-10219
Bremen Molecular and Marine Biology Retreat, 26.01 27.01.2007, Etelsen (D)
List of Acronyms
A6P L-ascorbyl-6-palmitate
AMVN 2,2-azobis-(2,4-dimethylvaleronitrile)
BDE H-bond dissociation enthalpy
DBO 2,3-diazabicyclo[2.2.2]oct-2-ene
DBO-R 1,4-dichloro-2,3-diazabicyclo[2.2.2]oct-2-ene
DBO-S 5-methyl-1-isopropyl-2,3-diazabicyclo[2.2.2]oct-2-ene
DMAP 4-dimethylaminopyridine
DNA deoxyribonucleic acid
DPPC 1,2-Dipalmitoyl-sn-glycero-3-phosphocholine
DSC differential scanning calorimetry
DTNB 5,5-dithiobis(2-nitrobenzoic acid)
EA activation energy
EDTA ethylenediaminetetraacetate
ELISA Enzyme-linked immunosorbent assay
EP electron transfer processes
EPR electron paramagnetic resonance spectroscopy
FRAP fluorescence recovery after photobleaching
GSH reduced glutathione (-glutamyl-cysteinylglycine)
GSSG glutathione disulfide
HPLC high performance liquid chromatography
hTTP human tocopherol transfer protein
IR infrared
ISC inter-system crossing
LDL low density lipoprotein
MDA malondialdehyde
MTAD 4-N-methyl-1,2,4-triazoline-3,5-dione
N-TOH naphtyridinol-based tocopherol
xii
Abstract
This doctoral thesis is concerned with determining antioxidant mobility by
fluorescence, especially in lipid membranes. It expands on previously determined
data regarding antioxidant diffusion by employing different lipids, synthetic
antioxidants, and varying pH. The probes used are derivatives of 2,3-
diazabicyclo[2.2.2]oct-2-ene (DBO), which are known for their exceptionally long
lifetimes in aerated aqueous media (325 ns in H2O under air). Their n,* singlet-
excited state is efficiently quenched by an aborted hydrogen abstraction mechanism,
which makes them ideally suited to probe antioxidant diffusion.
During the course of my Ph. D. thesis I was able to expand the toolbox of available
DBO derivatives with a very reactive one, Fluorazophore-R, and a more acid-stable
lipophilic derivative, Fluorazophore-LE.
I was also able to determine the mutual lateral diffusion coefficient of a synthetic
vitamin E derivative with single-photon counting measurements. This N-tocopherol
displays higher mutual lateral diffusion coefficients than -tocopherol (5.4 107 cm
1
s1 vs. 3.73 107 cm1 s1 at 40C, respectively) with a very similar activation
energy of 43 6 kJ/mol (compared to 47 5 kJ/mol), which is indicative of a higher
antioxidant potency.
Expanding on previous experiments I was also able to probe the differing behavior of
-tocopherol at the phase transition threshold of liposomes composed of a high
melting fully saturated lipid, DPPC. Above the phase transition temperature, mutual
lateral diffusion coefficients of 107 cm2 s1 were found, similar to the ones in POPC,
while above the pre-transition temperature the coefficients were 108 cm2 s1. This
confirms the high accuracy of our measurement principle.
Furthermore, the first steps have been taken in investigating the pH dependence of the
synthetic antioxidant L-ascorbyl-6-palmitate, which is only a decent lipophilic
antioxidant in low pH environments.
Additionally, I have worked on a third party funded research project for a company
analyzing urine and blood samples, the results of which I am not at liberty to discuss.
Chapter 1
Introduction
Chapter 1: Introduction 3
1 Introduction
With DBO, a simple bicyclic azoalkane, as a fluorescent probe (see Section 1.5.1),
it is possible to measure both governing factors for lipophilic antioxidant activity, the
hydrogen donor propensity and the lateral diffusion coefficient. Only with both of
these can one assess the potency of new synthetic antioxidants. Coming back to the
N-TOH, I was able to fit the measured curves in order to conclude that this was,
indeed, a very active lipophilic antioxidant, and, in conjunction with the other
experiments performed, a compound worth investigating further. The next logical
step to take in the investigation of lateral diffusion of antioxidants was the change in
the type of lipid used to construct the liposomes. Instead of a monounsaturated lipid a
fully saturated lipid was used, which gave me the opportunity to investigate the
behavior of the antioxidant above and below the phase transition temperature. I was
very surprised that our method was sufficiently sensitive to measure the very small
lateral diffusion coefficient even in the ripple phase of our liposomes. This is very
promising, considering the differences in lipid composition of biological membranes.
Another important task to further enhance our method is the investigation of new
probes based on DBO. I could show that bridgehead substitution of DBO drastically
alters the photophysical properties of the compound, and that this toolbox approach
is very practical when measuring a large range of antioxidants, with all their diverse
constituents.
In summary I would like to emphasize that antioxidant activity studies are still in
their infancy, and that, if one ever hopes to fully understand the processes they are
involved in, a lot more basic research must be performed. As a start, it would help to
construct a table containing all of the biologically relevant lipids and the diffusion
coefficients of lipid-soluble antioxidants therein. Without such a table, the
investigation of synthetic antioxidants will not be feasible. For this, new probes will
Chapter 1: Introduction 5
have to be designed and synthesized, but the method, which I have helped to develop
in this thesis, is so robust that it is worth putting more effort into it.
The most common reactive oxygen species (ROS) and reactive nitrogen species
(RNS) encountered are superoxide, hydroxyl, peroxyl, alkoxyl, hydroperoxyl, nitric-
oxide and nitrogen dioxide radicals. Hydrogen peroxide, although not a radical itself,
is known to be a very important progenitor for radicals and as such is worth
mentioning. Transition metals, facilitators of free radical generation as well, will only
be mentioned briefly.
A fifth class is sometimes added to this list, the repair enzymes, which help
minimize the effect of free radicals on cells and tissue.[1] These actually do not adhere
to the definition of antioxidant given above, since they do not prevent or even delay
damage. It is therefore not desirable to weaken the definition by their inclusion.
Of these four classes only the last one will be investigated in the scope of this
Ph.D. work. Special emphasis will be put on vitamin E, a class of lipid-soluble
antioxidants, and on ascorbic acid (vitamin C), due to its close in vivo connection to
vitamin E and radicals in membranes. Several other antioxidants will be mentioned
briefly in their respective chapters.
Two major factors determine the potency of any low molecular weight chain-
breaking antioxidant: the hydrogen atom donor propensity, and the diffusion
coefficient. While the former is based on the molecular structure of the antioxidant
molecule[10] with extraneous factors contributing only to a small degree, the diffusion
coefficient is extremely dependent on the environment. In aqueous solution most of
the radical scavenging processes are close to diffusion controlled, but for antioxidants
incorporated into the lipid membrane, for example vitamin E, the situation is less
straightforward. The membrane composition, i.e., which lipid or lipid mixtures
constitute the membrane as well as the amount and type of additives, e.g. proteins and
compounds like cholesterol, define the boundary conditions for diffusion.
Chapter 1: Introduction 8
One of the fundamental features that distinguishes living organism from inanimate
matter is the ability to differentiate itself from its surroundings. Without a working
compartmentalization many important processes are next to unthinkable, such as
energy generation, selective signaling, substance uptake and protection against
xenobiotics or bacteria. Lipid-soluble low molecular weight chain-breaking
antioxidants are so interesting because they are located in this cellular organelle,
which is not easily penetrated from the outside. In medicine, lipid-soluble
antioxidants receive special attention due to the importance of the preventive effects
they have for certain human ailments.[11] For example, the peroxidation of lipids in
biomembranes[12] and of low density lipoprotein (LDL) particles[13] may be one of the
factors contributing to atherosclerosis. Low-density lipoprotein (LDL) particles, the
major carrier of cholesterol in blood, form fatty streaks[14] on the interior walls of
arteries. From an anthropogenic point of view the vitamin E constituents are
especially noteworthy as the most important, albeit not the only, lipid-soluble
antioxidants in mammals.
1.4.1 Vitamin E
Vitamin E is a collective term for eight different substances, which are divided
into two subclasses, the tocopherols and the tocotrienols. The name tocopherol was
coined when researchers discovered a factor important for rat reproduction,[15] from
the Greek tokos for childbirth and phero for to bring forth, with the suffix ol
added to indicate its phenolic nature. All of the vitamin E constituents contain two
structural motifs: a chromanol head (with a heterocyclic and a phenolic ring) and a
phytyl tail which contains three isolated double bonds in tocotrienols (hence their
name). Vitamin E uptake occurs via food, and dietary sources for vitamin E include
wheat-germ, vegetable oils, margarines, nuts, grains, and green leafy vegetables.[1]
Tocopherols and tocotrienols exist in four different forms each (-, -, -, -),
which differ in the methylation pattern on the chromanol-head (see Scheme 1.1).[16]
Chapter 1: Introduction 9
R1
OH 5
7 2
R2 O R3
-Tocopherol is the most widely studied constituent of vitamin E, not only due to
it being regarded as the most active,[20] but also because of the, consequently, best
commercial availability. Financial restraints are also the reason that the all-racemic
-tocopherol steroisomer is used for many experimental investigations. While the
RRR-steroisomer is the naturally occurring one, the all-rac form can be used for
experiments focusing on simple liposome-based membrane models. For example,
Chapter 1: Introduction 10
lateral diffusion does not change between stereoisomers.[21] When going to more
complex, and, thus, more biologically relevant, membrane assemblies with multiple
lipids and proteins, care has to be taken when employing the all-rac -tocopherol.
Studies with cholesterol in membranes have shown a selective binding of the
different cholesterol-steroisomers to lipids and proteins,[22] and if -tocopherol
behaves in a similar fashion, the all-rac form might not correctly resemble the in vivo
situation. For cell studies it is also imperative to consider that only -tocopherol
meets the dietary requirements for humans, all others are only poorly recognized by
the hepatic -tocopherol transfer protein. Even supplementing the diet of an animal
lacking this transporter with high amounts of other vitamin E constituents has been
shown to cause severe cases of vitamin E deficiency.[23]
a) b) c)
N N N
O O HO O O O O
P P P
O O O O O O
O O O O HO O O
O O O O
O O O
HO
The physiological function of vitamin E is still under debate. A long known and
important function is the inhibition of lipid peroxidation by scavenging chain-
propagating lipid peroxyl radicals.[28] The chain reaction[12b] initiated by lipid
peroxidation can ultimately lead to the rupturing of the cell, or at least to damage of
the intrinsic membrane proteins. Other possible functions include, but are not limited
to, steric effects on membrane conformation, association with specific proteins or
lipids or even as regulators for protein activity or gene expression.[27, 29]
Even
prooxidant effects have been described in certain situations.[13c, 30] In a normal cellular
membrane environment the antioxidant effects of the vitamin E constituents are,
however, unquestioned. As indicated above, this is accomplished by the donation of
the hydrogen atom bound weakly to the phenolic hydroxyl group in the chromanol
headgroup.[31] Its accessibility from within the membrane as well as from the aqueous
bulk leads to its high antioxidant potency. The accessibility of the radical to the
antioxidant is explained by the floating-radical theory, which is based on the
polarity of the radical, as visualized in Scheme 1.3.[32]
Chapter 1: Introduction 12
HO HO HO
O O O
+O2 +O2
O OH O
Chain propagation
O O O
Radical "floats"
toward the polar
headgroups
O Radical deactivation
Lateral diffusion of HOCH2 O
HO by ascorbate
H O OH
!-tocopherol
O O O
O HO O HO O HO
O O O
Major Minor
pathway pathway
O O
OH
O
1.4.2 Vitamin C
Ascorbic acid, also known as vitamin C, is a chain-breaking low molecular weight
antioxidant as well, but, in contrast to vitamin E, it is water-soluble. Plants and most
animals are able to synthesize ascorbic acid from glucose, but humans and several
other animals have lost the terminal enzyme necessary during evolution, and
conversely have to acquire it from their diet. Apart from its function as an antioxidant
ascorbic acid is also a cofactor for different enzymes, for example, the ones involved
Chapter 1: Introduction 13
OH OH OH OH
O O
O C O C
H H2 H H2
HO O HO OH
Ascorbic acid at physiological pH Ascorbic acid below pH 4
OH
O O
O
O
HO O
Ascorbyl-6-palmitate at physiological pH
NMR has, by contrast, mostly been employed in the elucidation of lipid lateral
diffusion, and the influence of additives such as cholesterol thereon,[42] a
phenomenon of high impact to the physiological role of the vitamin E constituents.
Other areas in which NMR studies have proven to be invaluable are the determination
of lipid domains (so-called rafts) as well as the corresponding process of demixing,
chiral effects[43] and the influence of solid-like obstacles, for example proteins, on
lipid diffusion.[44]
The measurement of the actual lipid peroxidation has been, and still is, one of the
most common methods to evaluate oxidative stress and antioxidant activity. Lipid
peroxidation is monitored by reporter compounds, such as thiobarbituric acid-reactive
substances (malondialdehyde, MDA), or by investigating the pressure of oxygen. The
conundrum regarding the in vivo antioxidant potency of -tocopherol vs. its reported
prooxidant effects has been investigated by lipid peroxidation studies,[49] as has the
influence of carotenoids on lipid peroxidation in liposomes.[50] The model for -
tocopherol and ascorbic acid synergism is also largely based on lipid peroxidation
studies,[51] as are experiments regarding mice lacking a crucial tocopherol transporter
Chapter 1: Introduction 15
protein.[52] Newer research, especially in the field of food chemistry has also gainfully
employed this technique, for example to assess antioxidative compounds from the
outer scales of onions[53] or to compare fruit juices with regard to their antioxidant
capacity and influence on fruit fly development.[54]
Lastly, several methods most commonly employed in the field of medicine are
simply physiological tests that scan for lipid peroxidation by analyzing byproducts.
These tests have in common that they constitute a fast and non-invasive way to
measure lipid peroxidation, especially in clinical trials. Two of the most widely used
biomarkers are the exhalation of pentane (sometimes ethane as well)[55] and the
amount of isoprostane in urine.[56]
CH2NH2 Cl
O Me O O
O FluorazophoreL FluorazophoreA FluorazophoreR
Si
Ph Me
N FluorazophoreA250
N
N
N
O N
N
O
O
* O FluorazophoreP NC(H3C)2
P
N(iPr)2
O Fluorazophore-amidite
N
FluorazophoreC N
O
S
N N N
O HN
N N N
O
FmocHN COOH
"caged" CH2OH
FluorazophoreS Fluorazophore FluorazophoreH Fmoc-Fluorazophore FluorazophoreLE
way to monitor antioxidant behavior in solution, with the major advantages of the
high resolution inherent to fluorescence techniques and the high photostability of
DBO (i.e., the probe is not consumed in the experiment), which makes the elucidation
of kinetics relatively easy and straightforward. Although the solvent effects on DBO
fluorescence are quite severe[63] it has been shown that a derivative of DBO, dubbed
Fluorazophore-S, exhibits a higher selectivity for antioxidants at the cost of lower
reactivity.[64] In addition to the assessment of the antioxidant capabilities of vitamin E
and C, discussed below, other antioxidants, for example melanin and its precursors,
have also been successfully analyzed with DBO as a probe.[65]
Fatty acids can be converted to their ester derivatives by activating the carboxylic
acid functionality, e.g. as an acid chloride (see Scheme 1.8).[68] Since palmitoyl
chloride is commercially available, it was used as the reagent of choice to prepare the
Fluorazophore-H ester compound. The acid chloride reacts with the hydroxy group of
the alcohol to form the ester and hydrogen chloride. The formed hydrogen chloride is
trapped by addition of the base triethylamine, which pulls the equilibrium of this
reversible reaction to the side of the ester. That causes the precipitation of its
hydrochloride salt, which, at the end, is simply filtered off. The addition of a catalytic
amount of 4-dimethylaminopyridine further improves the reaction rate and the final
yield of the ester compound (approx. 96%).[69]
Chapter 1: Introduction 19
NEt2
O H NEt2
1) K2CO3, 2 HNEt2 CH2CHCHO, Et2O CHO
2) !, HNEt2 0 C, 5 h
1 2 3
CHO
conc. HCl NaBH4, MeOH OH
r.t., 90 min 0 C, 18 h
4 5
O O
MTAD, CH2Cl2 N H2, Pd/C N
0 C N N CH3 EtOH N N CH3
OH O OH O
6 7
1) i-PrOH/KOH
N
2) !, 15 h, O2
N
OH
8
N
N
OH
Fluorazophore-H
Cl
O palmitoyl chloride
CH2Cl2 / NEt3 / DMAP
N 0C to r.t. / 18h
N
O
O
1-hydroxymehtyl-DBO-palmitoyl ester
(Fluorazophore-L)
Chapter 1: Introduction 20
O
HOCH2 O
HO
H O OH
N * HO *
N
N N HO
N N
O O O
O O O O O
h! h!
Minor pathway Major pathway
kback DL
Fast process Lateral diffusion
DL
N H O N *HO
N N
O O
O O O O
kq
Chapter 1: Introduction 21
In solution, molecular motion occurs at the rate of diffusion, but in the more rigid
lipid environment diffusion is markedly decreased. The different lipid-soluble
antioxidants display different diffusion according to the shape and size of the
membrane into which they are integrated. SDS micelles, t-octyl-
cyclohexylpolyethoxyethanol (Triton XR-100) micelles and POPC liposomes have to
be treated in a different fashion when mathematically describing the diffusion
processes in their membranes. SDS micelles, with a diameter of 2 nm, can be treated
according to the ideal micellar quenching model with a Poissonian statistical
distribution of quencher among the micelles.[31a, 72] The unimolecular quenching rate
constant was found to be 2.4 0.4 x 107 s1 at 27 C .[31a] For the similarly built but
larger (4 nm in diameter) Triton micelles the ideal micellar quenching model is no
longer applicable.[73] The two possible diffusion models are the free three-
dimensional diffusion and the lateral, or two-dimensional, diffusion. Lateral diffusion
describes processes where molecules move in a 2D layer, for example on the surface
of a sphere. It has been inferred that the 2D diffusion model is better able to describe
the experimental data (refer to Section 2.5 for a detailed description of the fitting
procedure). The mutual lateral diffusion (DL) coefficient describes the movement of
the probe Fluorazophore-L and its quencher -tocopherol in the confines of the lipid
layer, and is 3.5 0.1 x 107 cm2 s1 at 27 C for Triton XR-100 micelles.[31a] POPC
liposomes are not only much larger (70 nm in diameter) but also consist of a double
layer. This makes them the investigated lipid ensemble that most closely resembles
actual biomembranes. POPC is a monounsaturated phospholipid with a fatty acid
Chapter 1: Introduction 23
chain length of 16:0 (palmitoyl) and 18:1 (oleoyl), and a phase transition temperature
of 2 C. The treatment of the fluorescence decay traces with a global fitting
procedure allows the determination of DL, which is at 1.8 0.1 107 cm2 s1 at 27
C.[31a] With this result, Fluorazophore-L could be established as a sensitive and
relatively simple probe for antioxidant activity in membrane model systems (see also
Figure 1.1).[31a] The diffusion coefficients recovered by this method are mutual lateral
diffusion coefficients, i.e., the movement of probe and quencher, but due to the close
structural resemblance of Fluorazophore-L and -tocopherol it can be assumed that
both contribute by approximately 50%. Also of note is the high temperature
dependence of -tocopherol diffusion, and thus its high impact on the quenching rate.
coefficient is one order of magnitude smaller (0.06 x 107 cm2 s1 at 25C). The
calculated EA of 49 5 kJ mol1 is again in accordance with the values for the
vitamin E constituents. This finding can be explained by the charge carried by the
headgroup of L-ascorbyl-6-palmitate. In contrast to the uncharged chromanol group
the negative charge effectively displaces L-ascorbyl-6-palmitate from the membrane,
thus leading to an unfavorable encounter complex, requiring an up-down transversal
movement. This is similar to the quenching of Fluorazophore-L by vitamin C, which
is even farther dislocated from the membrane.[21]
Chapter 2
Materials and Methods
Chapter 2: Materials and Methods 29
2.1 Materials
-Tocopherol was used in its all-rac form (99.6%, donation from DSM
Nutritional Products, Kaiseraugst, Switzerland). L-ascorbyl-6-palmitate was
purchased from Sigma (Seelze, Germany) and recrystallized from hexane prior to
use. 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) and 1,2-Dipalmitoyl-
sn-glycero-3-phosphocholine (DPPC) were obtained from Sigma and used as
delivered. All solvents were of spectroscopic grade purity; all other chemicals were
p.a. purity. The water used was always of ultra-pure grade.
Chapter 2: Materials and Methods 30
[
I(t) = I 0 exp ( k0 t + 2.31DL N a ) [Q2D ]t + 7.61 DL RN a [Q2D ] t ] (1)
HO
N N
N-TOH
Chapter 3: Antioxidant Activity Measured by Fluorescence 36
Antioxidant and Probe Structure and Function
Figure 3.1: N-tocopherol lifetime trace with quencher, note the bi-exponential
lifetime
Cl
N N N
N N N
Cl
DBO-P DBO-S DBO-R
Chapter 3: Antioxidant Activity Measured by Fluorescence 40
Antioxidant and Probe Structure and Function
CCl4 72 12 d 403
CHCl3 13 65 12
Chapter 3: Antioxidant Activity Measured by Fluorescence 41
Antioxidant and Probe Structure and Function
The four main driving forces that determine the quenching are steric arguments,
the shift in absorption maxima, the nucleophilicity and the presence of charge-
transfer induced quenching.
The long lifetime of DBO-P[86] in aerated solvents arises due to its small singlet-
triplet gap (20-23 kcal mol1) which does not allow quenching by energy transfer, and
an oxidation potential that is too high to allow electron transfer processes (EP = 1.45
V vs. SCE).[87] This leaves only oxygen-assisted intersystem crossing (ISC) as the
main interaction channel. The low bimolecular oxygen quenching rate constant for
DBO-R (320 106 M1 s1, 6-8 times smaller than those of DBO-P and DBO-S)
confirms the notion that charge-transfer interactions can contribute significantly to
the quenching by oxygen.
(p-methoxy) group, have been employed to assess the philicity of the fluorazophores.
Singlet-excited DBO-P and DBO-S must be qualified as nucleophilic species,
whereas DBO-R is philoneutral or even mildly electrophilic.
Figure 3.2: Schematic representation of the phases in DPPC liposomes with respect
to dependence on temperature, where the patterned grey and blue regions signify rigid
and more fluid regions with negligible or sizable diffusion, respectively.
As our measurement system does not yield structural data, the interpretation is
done in a way that explains the observations in the most elegant and plausible way
possible.
Three different ranges for the mutual lateral diffusion coefficients DL were
identified. In the solid-gel phase, below 30 C, the DL can be assumed to be smaller
than 109 cm2 s1, below the detection limit of our method. Above the main phase
transition temperature, in the liquid-crystalline phase, DL values of 107 cm2 s1 are
found, analogous to POPC, albeit slightly lower. The third, with DL values of 108
cm2 s1, is the ripple phase, in which only those antioxidants and probes located in the
already melted regions, the ripples, can diffuse with relative ease, while those still
Chapter 3: Antioxidant Activity Measured by Fluorescence 45
Antioxidant and Probe Structure and Function
located in the solid-gel like part of the liposome do not move at all. In order to
calculate the DL in the ripple phase, the original equation (see Section 2.5) had to be
expanded (see equation 2 and the corresponding simplified equation 3).
The recovered DL values were in good agreement with the previously published
literature values, both by us and by others (see the full article, Appendix IV). For
DPPC in the liquid-crystalline phase the values are close to the ones for POPC, and
the slopes are almost parallel (see Fig. 3.3). This leads to essentially identical
activation energies (49 5 kJ/mol for DPPC vs. 47 5 kJ/mol for POPC). In the
ripple phase, the activation energy is much higher, 175 50 kJ/mol.
Chapter 3: Antioxidant Activity Measured by Fluorescence 46
Antioxidant and Probe Structure and Function
As outlined in Section 1.6.2 the diffusion studies yielded only a very low diffusion
coefficient of A6P inside POPC liposomes, whereas the diffusion in solution is very
similar to tocopherols and tocotrienols. This does not necessarily mean that A6P does
not diffuse as well as the vitamin E constituents in liposomes, since the assay
procedure is based on a contact quenching of the antioxidant with the probe
Fluorophore-L. The aborted hydrogen abstraction mechanism, by which the n,*
excited state of DBO is quenched, has an interaction radius of approximately 8 , i.e.
the probe and quencher need to be in very close proximity. This means, by default,
that anything changing the penetration depth of the antioxidant also influences the
encounter probability of probe and quencher, and, thus, the extracted mutual lateral
diffusion coefficient.
Ascorbic acid, and A6P accordingly, has a pKa of 4.25. This means that at pH 7 a
high amount of the A6P molecules will be deprotonated and thus charged. This may
lead to a dislocation from the membrane to the surrounding water. If the A6P
molecule sticks out of the membrane, it will of course not be able to undergo
contact quenching with the Fluorazophore-L, and therefore only the uncharged
molecules will quench the fluorescence (see Figure 3.4). This leads to a lower
observed lateral diffusion coefficient, and even though it is not an indicator of actual
lateral diffusion, it is an indicator of how well the antioxidant is able to interact with
radicals.
Chapter 3: Antioxidant Activity Measured by Fluorescence 48
Antioxidant & Probe Structure and Function
pH 7
pH 3
Figure 3.4: Placement of the A6P molecule (red) at high and low pH. Probes,
Fluorazophore-L and Fluorazophore-LE, shown in blue.
100
DBO-OH
101
Normalized Counts
102 Fluorazophore-L
103
Fluorazophore-LE
104
! in ns
Figure 3.5: Lifetime decay traces of various DBO derivatives at pH 2. DBO-OH
traces recorded in water. Fluorazophore-L traces recorded in POPC liposomes, with
progressing time (light color to darker color), directly after liposome creation, after 4
hours, 8 hours and after 20 hours at 50 C. Fluorazophore-LE traces were recorded
after 20 hours at 50 C.
Chapter 3: Antioxidant Activity Measured by Fluorescence 50
Antioxidant & Probe Structure and Function
Preliminary experiments with the new probe suggest that the observable mutual
lateral diffusion coefficients are one order of magnitude greater at lower pH than at
pH 7, very similar to those recovered for the vitamin E constituents. This would mean
that A6P is an efficient lipid antioxidant only in acidic environments, and should only
be used as such if the pH value is low enough, such that A6P predominantly adopts
its neutral form. At neutral pH vitamin E should be used as a lipid-soluble
antioxidant. We could also successfully increased our toolbox of available probes by
the addition of an acid-stable lipid-soluble derivative, Fluorazophore-LE, which has
been synthesized by Dipl.-Chem. T. Schwarzlose.
Chapter 3: Antioxidant Activity Measured by Fluorescence 51
Antioxidant & Probe Structure and Function
3.5 Conclusions
During the course of this Ph.D. work it could be shown that DBO based fluorescent
probes are especially suited to investigate antioxidant behavior. Dyes from the
fluorazophore family allow both the determination of the hydrogen atom donor
propensity of an antioxidant, as well as the mutual lateral diffusion coefficient of a
lipid soluble antioxidant in membrane systems. The methodology is sensitive enough
to allow even the measurement of diffusion processes in the ripple phases of
membranes, with mutual lateral diffusion coefficients as low as 0.2 108 cm2 s1.
The diffusion of antioxidants in the ripple phase has been studied with fluorescence
for the first time. The high degree of modularity of the dye, afforded by the
substitution at the bridgehead position, is beneficial for other purposes as well, for
example in acidic media, made possible by changing the ester to an ether linkage.
Additionally, it could be demonstrated that the lifetime of the DBO dyes can yield
additional information about the position or environment of the probe, for example in
a lipid system. It is now possible to elucidate synthetic antioxidants as well, because
they can be compared to the naturally occurring ones. This yields, for the first time,
an accurate assessment method to gauge the potency of a synthetic antioxidant.
3.6 Perspectives
There are several promising routes to take in order to advance the projects conducted
in this Ph.D. work. One of the first steps would be to determine the individual lateral
diffusion coefficient of Fluorazophore-L. This would allow the determination of
lateral diffusion coefficients of antioxidants, without the need to factor in the
diffusion of the probe as well. The most promising approach for this problem would
be to take a fluorescent probe with a known lateral diffusion coefficient (NBD-
derivatives, for example) and to cross-correlate this with our mutual lateral diffusion
coefficients. Then, our methodology can be expanded to different lipids
(phosphoethanolamines or sphingomyelins) or to liposomes composed of multiple
lipids (POPC and DPPC, for example), in order to investigate situations similar to the
lipid raft formation observed in biological membranes. Also, the addition of
biologically relevant membrane additives, for example membrane-bound proteins,
Chapter 3: Antioxidant Activity Measured by Fluorescence 52
Antioxidant & Probe Structure and Function
channels, or protein anchors, could yield valuable insights into in vivo membrane
function. Other relevant antioxidants, like curcumin, could also be investigated with
our method. A long-term goal would be to determine another important process in
membranes, the flip-flop, or transversal diffusion, where a molecule changes
between the inner and outer leaflet of the membrane. To measure this very slow
process, substantial alterations to our measurement method will have to be made. One
idea would be to destroy the fluorescent probe in the outer leaflet, and measure the
destruction of flip-flopping probes over time. The time-range necessary for these
measurements is quite large, as transversal diffusion occurs over multiple hours or
even days. This might be remedied by employing bolaamphiphiles, be they simple
molecules or membrane spanning peptides, which facilitate transversal diffusion.
Chapter 4
Industry Project
Chapter 4: Industry Project 57
4 Industry Project
I have also been involved in an industry project during my Ph.D. regimen. I
remain under a non-disclosure agreement, so I will only give general information
regarding the goals of the study and the experiments performed in order to achieve
them.
The company that commissioned the survey had developed a food additive, based
on various ingredients found in fruit and vegetables that should be able to increase the
antioxidant potential in humans. The objective of the test was to determine how a pill
containing these ingredients would alter the antioxidant potential and population in
the body, or more specifically, in bodily fluids. In order to accomplish this, blood
serum and urine samples were analyzed for their antioxidant content or antioxidant
potential.
4.1 Samples
The samples were collected by qualified medical personnel and shipped to our
laboratory on dry ice. These samples were anonymous, containing no information
about the donor or whether or not the person was part of the test or control group
(who were given placebos).
4.3 Vitamin E
For a description of vitamin E as an antioxidant see Section 1.4.1. The method
used for HPLC determination of vitamin E employed a Polaris Ether-RP-18-A-
250/4.6/5 column with an oven temperature of 25C and a flow of 1.0 ml/min at the
monitoring wavelength of 280 nm. The eluent was a 75% acetonitrile/25% methanol
mixture. The samples were prepared by diluting 100 l sample with 400 l ethanol in
order to precipitate the proteins. After centrifugation for 6 min, 10 l of the
supernatant were injected. If the sensitivity was to low, the injection amount was
increased to 20 l.
For the parallel HPLC determination of uric acid and ascorbic acid the column
used was a Polaris Ether-RP-18-A 250/4.6/5, 20 mmol/L KH2PO4, 3.9 mmol/L
phosphoric acid and 5% acetonitrile eluent-mixture. At a 1.0 ml/min flowrate 10L
sample were injected and measured at 265 nm at 25C oven temperature. Sample
preparation consisted of mixing 200 L sample with a 200 L orthophosphoric acid
and perchloric acid mixture (6:3), after which 20 mmol/L of
ethylenediaminetetraacetate (EDTA, to prevent transition metal catalyzed
deactivation of the antioxidants) was added. This mixture was centrifuged for 6
minutes and 10 L of the supernatant was measured. If the signal was too low, a 20
L sample was injected.
Chapter 4: Industry Project 59
H 2C O Fatty Acid
HC O Arachidonate R=(CH2)2N(CH3)2
H 2C O PO3 R+
-O2 or R
O
H 2C O Fatty Acid
!-Cleavage H
HC O Peroxy Acid
OH
H 2C O PO3 R+
4-hydroxy nonenal and other aldehydes
Rearrangement
COOH
H 2C O Fatty Acid O O
HC O Endoperoxide
H H
H 2C O PO3 R+ malondialdehyde
Reduction by 12(S)-HHTrE
cellular [12(S)-HHT]
OH
peroxidases OH
H 2C O Fatty Acid
Phospholipas A2
HC O Isoprostanes COOH
H 2C O PO3 R+
HO
OH
ELISA!
isoprostane antibody. The amount of tracer able to bind to the antigen binding sites
on the antibody is inversely proportional to the concentration of 8-isoprostane in the
sample. The 96-well plate is coated with mouse anti-rabbit antibodies that bind to the
Enzyme Linked Immunosorbent Assay!
Fc-portion of the rabbit antibodies (see Scheme 4.2).
Free 8-Isoprostane!
Mouse Monoclonal Antibody!
Acetylcholinesterase linked !
to 8-Isoprostane (Tracer)!
Chapter 4: Industry Project 61
O
N Acetylthiocholine
S
Acetylcholinesterase
O
N Thiocholine
O S
NO2 S N S NO2
S
OOC COO
5-Thio-2-nitrobenzoic acid
It is not possible to directly use the data recovered by the 8-isoprostane assay. This
is due to the widely varying behavior of the test subjects. For example, a person who
drinks a lot of fluids will produce more urine, so the concentration of 8-isoprostane
will be lower. To account for this, a concomitant creatinine assay has to be
performed. The usual unit used to report urinary 8-isoprostane levels is ng/mmol
creatinine.
Creatine, produced in the kidney, liver, and pancreas is used in brain and muscle
cells, where it is phosphorylated and used as an energy source.[96] A small portion is,
Chapter 4: Industry Project 62
a)
N N
NH NH2
N N
O O
H
OH
O2N NO2
b)
NO2
4.7 GSH[101]
GSH is a tripeptide (-glutamyl-cysteinylglycine) and the major free thiol in most
living cells. It is involved in a variety of biologically important processes and the
major antioxidant in animal tissues.[102] Most of the cellular glutathione is in its
reduced form (90-95% of the total glutathione). Oxidation leads to the formation of
glutathione disulfide, GSSG. In addition to being an important indicator of overall
cell health, elevated levels of GSH may indicate pathological changes in biological
Chapter 4: Industry Project 63
samples.[103] The Glutathione Assay Kit CS0260 by Sigma employed here uses the
conversion of DTNB by GSH to a yellow product, TNB, which can be quantified by
absorption measurements at 412 nm with a kinetic read out. GSH is hereby
regenerated from GSSG by glutathione reductase and the reduced form of
nicotinamide adenine dinucleotide phosphate (NADPH) (see Scheme 4.5)
O O NO2 O O O O
C OOC C C
H C H H C H H C H
N H N H H N
S
O C H O C H H2 C O
2 S 2
2 H C C SH
S
H C C S S C C H 2
N H N H H N
OOC
O C O C C O
NO2
CH2 CH2 CH2
CH2 OOC CH2 CH2
NO2
H3N C H NH3 C H H C NH3
C C C
O O 5,5'-Dithio-bis- O O O O
5-Thio-2-nitrobenzoic acid
(2-nitrobenzoic acid)
Scheme 4.5: Colorimetric GSH assay principle
Because the conversion rate is proportional to the GSH content up to very high
levels, it is a reliable way to elucidate the total glutathione content of a sample.
Because of the low content of GSH in blood serum, it became necessary to measure
all samples individually on a Cary 4000 UV spectrophotometer; the multiplate reader
did not offer sufficient resolution to guarantee accurate results.
Glutathione reductase
GSSG + NADPH + H+ 2 GSH + NADP+
References 65
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Chapter 5
Appendix
Chapter 5: Appendix I 73
Global Fitting Procedure
The lifetimes are recorded in the same time frame, 40 min, and with the exact
same slits. Each fluorescence decay trace is exported from the Edinburgh Instruments
software as a .txt file. The global fit is based on data at the same temperature, but
with different quencher (i.e. antioxidant) concentrations. It is helpful to make new
folders for each temperature and copy the corresponding traces at the varying
temperatures (hereafter referred to as Sn, where n is the amount of quencher added to
the mixture in the experiment, Ref is the reference measurement containing neither
probe nor quencher) into them, labeling them according to temperature.
Now it is time to create the Mastertable for each temperature, containing all the
information needed to proceed with the global fitting. The function New Data is
used to bring up a blank data file. A standard data file in ProFit contains 10 columns,
which is insufficient. After marking the rightmost column, Calc and Insert
Rows/Columns will bring up a window. Checking Insert at the right of selection,
and inserting 10 additional columns will be sufficient. The columns are named as
shown in Table 5.1. Additional data measured, i.e. S4, S6 etc., should be included as
well (for example, a setup with 4 concentrations should consist of 4 Sn values, 4 Sn
Ref columns and 4 Error Sn columns).
Time/ns Time/s Sn1 Sn2 Ref Sn1Ref Sn2Ref Error Sn1 Error Sn2
The .txt files are then imported into ProFit, but care has to be taken to use the
correct delimiters. The imported files tend to contain file information that is not
necessary, so the real data trace is cut out and pasted into the corresponding column
in the Mastertable, see Table 5.2.
Chapter 5: Appendix I 74
Global Fitting Procedure
Labels 060221DPPC_a-Toc_S0_48
Type Time Scan
Comment
start(nm) 0.00
stop(nm) 999.511.720 unnecessary
step(nm) 0.488281
fixed/offset(nm)
Xaxis Time
Yaxis Counts
0.00 1,00E+04
0.488281 1,00E+04
0.976563 1,00E+04
1.464.844 7,00E+03
1.953.125 1,00E+04
The Time/ns column need only be pasted once, as the time information is the
same for all traces. After all the experimental information has been compiled into the
Mastertable, convert the Time/ns column to the Time/s column. The option Data
Transform in the Calc tab is selected, minding the right in and out columns,
and with Simple Arithmetics the Time/ns column is multiplied by 109. Next the
reference values are subtracted from the decay traces. Again, Data Transform from
the Calc tab has to be selected, this time with Column Artihmetics, substracting
Ref from all the Sn columns, yielding the SnRef columns.
In order to calculate the individual error for each data point, the square root of the
unmodified traces, i.e. not subtracting the reference, is calculated. To each decay
traces Sn, +1 is added, again via Calc, Data Transform and Simple
Arithmetics, taking the same Sn column as the input and output columns, i.e.
overwriting the columns, then in the same window Various Functions and sqrt(x)
Chapter 5: Appendix I 75
Global Fitting Procedure
are used to calculate the error values Error Sn. The Mastertable is now complete
and should be saved.
The decay traces still contain information that is detrimental to the fitting
procedure, i.e. elastic scattered light and instrumental noise. That is why the first part
of the traces is discarded. The lifetime of the probe is sufficiently long to ensure
enough data stability, even if the first 100 ns are omitted from the global fitting. As a
general rule, all datapoints prior to the maximum have to be cut via Calc and
Delete Rows and Columns, and some more might be cut. As a rule of thumb,
anywhere between 70 ns to 100 ns will give a good fit.
A new file, the so-called Fitting-file, will now be created. This contains 5 columns:
N (which is just a running number), T/s, Counts, 2D-Conc. and Error (see Table 5.3).
The data from the Mastertable are now pasted underneath each other for the
columns T/s (which is always the same), Counts (the SnRef columns) and Error.
The two-dimensional quencher concentration (2D-Conc) is calculated by determining
the number of quencher molecules per m2 of lipid. This is achieved by calculating the
amount of molecules in the experimental setup and multiplying this value by the area
per molecule (70 for POPC, 63 for DPPC and 34 for Fluorazophore-L). These
values are then pasted into the file corresponding to their decay traces (Sx). For
example, S0, the sample containing no quencher, will have a 2D-Conc of zero.
Now the part of the 2D-Conc-column referring to the S0 sample is highlighted,
Calc Data Transform is used and the tab Formula with the value 0 is used. In
order for this to be restricted to just the selected cells, the box Use selected rows
only has to be checked. This process is repeated for the other concentrations.
Finally, the row index is multiplied by 1 to give the N column, using Simple
Arithmetics from the Data Transform option. The file is now prepared for the
Chapter 5: Appendix I 76
Global Fitting Procedure
global fitting procedure and should be saved. Figure 5.1 shows an example how the
data should look like in the Preview window.
Fitting
Load the function, click To menu in the function window and switch to the
Parameters window (see below for an example of a function). Make sure the two-
dimensional quencher concentration in the function and in your Fitting file match. Put
in the initial values as follows: all cts=10000, all base=0, const1 and const2=0,
conc=0 (the last three are already integrated into the function), t0= the fluorescence
lifetime of the S0 trace as determined by the Edinburgh Instruments software, R=8
1010 (distance for contact quenching in ) and D=0. Now the following parameters
are deactivated by either left clicking on them or unchecking the box used for
fitting: t0, const1, const2, conc and R. The only parameters varied in the fitting are
now the counts of the traces, the baselines and our goal parameter, the mutual lateral
diffusion coefficient D, for which the lower limit should be set to 0 in the parameters
Chapter 5: Appendix I 77
Global Fitting Procedure
Sample function for DPPC with four different quencher concentrations (0,
1.714E+16, 3.428E+16 and 5.142E+16):
begin
a[6]:=data[x,4];
a[4]:=7.61;
a[5]:=2.31;
if data[x,4]=0.00000 then
y:=a[3]+(a[1]*(exp(-(data[x,2])/a[2])))
y:=a[7]+(a[8]*(exp((-(data[x,2])/a[2])-(a[4]*a[6]*a[13]*sqrt(abs(a[14]*abs(data[x,2]))))-(a[5]*a[6]*a[14]*(data[x,2])))))
y:=a[9]+(a[10]*(exp((-(data[x,2])/a[2])-(a[4]*a[6]*a[13]*sqrt(abs(a[14]*abs(data[x,2]))))-(a[5]*a[6]*a[14]*(data[x,2])))))
y:=a[11]+(a[12]*(exp((-(data[x,2])/a[2])-(a[4]*a[6]*a[13]*sqrt(abs(a[14]*abs(data[x,2]))))-(a[5]*a[6]*a[14]*(data[x,2])))));
end;
Chapter 5: Appendix II, III and IV 78
Articles
Please find the articles mentionend in the previous chapters in their respective
journals:
AppendixV:Lebenslauf
Schulische Ausbildung
Zivildienst
Studium
Note: 1.8
Chapter 5: Appendix V 128
Lebenslauf
Mehrmonatige Forschungsaufenthalte whrend des Masterstudienganges
09/2005 Heute Doktorarbeit bei Prof. Dr. Werner M. Nau mit dem Thema
Antioxidant Activity Measured by Fluorescence:
Investigation of Antioxidant and Probe Structure as well as
their Mobility and Position, Jacobs University Bremen
EDV Fhigkeiten
EndNote
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Muttersprache: Deutsch
ChemieContact Innovation sucht Partner des VCI (Verband der Chemischen Industrie
e.V.), 10.10.2006, Hamburg (D)
21. Lecture Conference der Fachgruppe Photochemie, 06.10. - 08.10.2008, Bielefeld (D)
Bremen Molecular and Marine Biology Retreat, 26.01 27.01.2007, Etelsen (D)
NanoFun Center and Nanomol Graduate Retreat, 12.01 14.01.2011 Flammbacher Mhle,
Clausthal-Zellerfeld (D)
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