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Index
Index
Index
Abiotic soil characteristics 152 antagonist 151, 161, 227, 286, 294,
Acalymma vittatum 202 298
Acetobacter 108 antagonistic ability 146
A. diazotrophicus 92, 103 antagonistic capacity 114
Acremonium 4, 38 Anthoxanhum odoratum 290
A. zonatum 210 Anthracoidea fischieri 4
Actinomycetes 286 antibiosis 2, 76, 105, 106, 107, 138,
Agrobacterium 7, 93, 97, 162 145, 160, 239
A. radiobacter 104, 111, 162 antibiotics 121, 125, 133
A. rhizogenes 108 Aphelenchoides 52, 54, 271
A. tumefaciens 104 A. cibolensis 71, 271
Alcaligenes faecalis 99 Aphelenchus avenae 66, 271
Alcaligenes piechaudii 104 Aphidius ervi 20, 21
allelochemicals 231, 257 aphids 5, 16, 182, 195, 196, 198,
allelopathy effects 40, 108, 231, 257 199
Allium porrum 74, 199 aphid movement 21
Alternaria alternata 76, 200, 210 Aphis fabae 214
Ammophila arenaria 290, 293, 294, Aphis gossypii 308, 313, 314, 318,
300 326
Ammophila breviligulata 290 Aploneura lentisci 42
amoebae 64, 67 Arctorthezia cataphracta 194
Ampelomyces 230, 233 Armillaria luteobubalina 294
anastomosis 27, 28, 32 Armillaria mellea 72, 196, 273
Andropogon gerardii 291, 292 Arthrocladiella mougeotii 233
Aniulus bollmani 196 Avena sativa 21
antagonism 4, 5, 35, 106, 160, 165, Avirulence 162, 165
168, 237, 238, 242, 286, 299 Azoarcus 99, 108, 109
345
357
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30 May 2001 16:04:10
346 Index
Azospirillum 108, 109 Botryllus schlosseri 31

A. brasilense 95 Botryosphaeria ribis 196
Botrytis 199
B. cinerea 73, 199
Bacillus 93, 152 Bradyrhizobium japonicum 108, 113
B. brevis 108 Bradysia 195, 196
B. insolitus 108 Brevundimona vesicularis 105
B. pumilus 106, 111 Burkholderia cepacia 110
B. sphaericus 93 Burkholderia glumae 161
B. thuringiensis subsp. kurstaki 104
bacteria
bacterial chitinases 121 Cactoblastis cactorum 193
bacterial colonization 101 Cajanus cajan 272
bacterial community 107, 110, carbon starvation 125
114 Carduus 211, 216
bacterial localization 103 C. thoermeri 207
bacterial movement 95 Carex 4
bacterial multiplication 99 C. arenaria 291
bacterial N-fixation 212 Cassida rubiginosa 207
bacterial pathogens 104 Castanea sativa 287
bacterial penetration 99 Cenchrus biflorus 293
bacterial populations 3, 89, 101 Ceratocystiopsis ranaculosus 241, 243,
bacterial specificity 112, 113 245, 253, 258, 259
bacterial survival 103 Ceratocystis 239
bacterial transmission 92 C. fagacearum 105
bacteriocin 162, 163, 164, 168 Cercospora piaropi 210
bacterivores 66, 69 Cercospora rodmanii 210
beetles 4, 6, 16, 22, 53, 195, 196, 197, Cercospora sojinae 203
198, 203, 206, 207, 237, 239, Cerotoma trifurcata 22
257 Chaetomium globosum 123
Begomoviruses 5, 19, 20, 331 Chamaecrista fasciculata 291
Bemisia argentifolii 333 chitin 7, 72, 110, 111, 114, 121, 122,
Bemisia tabaci 6, 19, 331, 332, 333 125
Betula pubescens 194, 201 chitinases 121, 143
binomial distribution 311, 312, 315, chitinolytic activity 105
317 chitinolytic soil bacteria 7, 121
biocontrol 122, 124, 126, 196, 216 Chromobacterium violaceum 124, 125
biocontrol agents 135, 141, 163, 209, Chryphonectria parasitica 232
262 Chrysolina hyperici 195
biodiversity 189, 269, 298, 300 Cinara pinea 195
biological control 2, 6, 7, 8, 9, 28, 32, Citrus chlorotic dwarf 325
76, 103, 105, 108, 113, 127, citrus greening 324
132, 134, 144, 145, 148, 150, Citrus limon 271
151, 152, 160, 161, 162, 164, citrus tristeza 9, 188, 308
168, 169, 194, 185, 215, 227, citrus variegated chlorosis 325
230, 270, 271, 299, 300 Cladosporium 65
biosafety 167, 189 C. cucumerinum 198
Bipolaris sorokiniana 274 Clavibacter michiganensis subsp.
Blumeria graminis 233 sepedonicus 104
358
30 May 2001 16:04:11
Index 347
Clavibacter xyli subsp. cynodontis 104 Diabrotica undecimpunctata 198

coat protein 178, 179 Diaporthe phaseolorum 198, 212
Cochliobolus 67 Dioryctria albouitella 4
C. sativus 67 disease complexes 1, 2, 8, 9, 237, 263,
Coleosporium tussilaginis 200 274, 275, 276, 278, 294, 297
collembola 64, 65, 66, 70, 71, 73, 74, disease suppression 63, 65, 88,
76 141,150, 151
Colletotrichum gloesporiodes 195 diversity 132, 133, 134, 135, 136,
Colletotrichum graminicola 198 144, 159, 178, 287, 299
Colletotrichum lagenarium 201, 202 dose–response 151
Colletotrichum obiculare 195, 198 dose–response association 107
community 258 dose–response relationships 150
community function 69 dsRNA viruses 3, 27, 29, 31
community structure 63
competition 2, 7, 20, 32, 76, 93, 94,
107, 108, 113, 141, 144, 145, endotoxin 104
146, 160, 165, 238, 252, 253, ecosystem function 5, 77
254, 297, 334 ectomycorrhizal fungi 72, 76, 77, 122
competitive ability 253, 290 ectoparasites 51, 273
competitive interactions 54, 76, effective sample size 315, 318
238, 262 Eichhornia crassipes 210
competitive relationship 238 Elaeagnus umbellata 69
competitiveness index 139, 144 Embellisia chlamydospora 75, 292
complex aetiology 2, 8 Emex 210, 211, 216
Coniothyrium minitans 228, 233 E. australis 209, 216
Coriolus versicolor 74, 196 emigration rate 336, 339
cotton 92, 105, 111, 112, 271, 272, endophytes 2, 4, 36, 194
275 endophytic bacteria 5, 87, 88, 89,
cowpea 272, 275 98
Cronartium comandrae 196 endophytic colonization 112
cross-protection 177, 178, 180, 184, endophytic communities 87, 96,
186, 187, 188 108, 111, 114
Cryphonectria parasitica 3, 29, 31 endophytic community
cucumber 92, 112, 181, 198 structure 109, 110
cucumber mosaic virus 184, 188 endophytic population 92, 104,
Cucumovirus 178, 184 105, 110, 114
Curtobacterium flaccumfaciens 109 Endothia gyrosa 196
Curtobacterium luteum 110 Enterobacter 93, 104, 108
cyst nematodes 106, 107, 111 Enterobacter asburiae 94, 97, 101, 106
cytoplasmic elements 31 Entomocorticium 241, 243, 243, 245,
253, 258, 259, 262
enzyme activity 108, 111
Daiphorina citri 324 Epichloë 4, 38
Danthonia spicata 290 E. typhina 196
decision making 317, 318, 326 Epilachna varivestis 22
defence mechanisms 75, 278 Epirrita autumnata 201
Dendroctonus frontalis 239 Eragrostis lehmanniana 293
density-dependence mechanism 124, ergot alkaloids 40, 44
125 ergovaline 44, 55
359
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348 Index
Erwinia amylovora 104, 161 F. oxysporum f. sp. cucumerinu

Erwinia carotovera var. atroseptica 5, 65
104, 105 F. oxysporum f. sp. lini 138,
Erwinia carotovera var. caratovera 5 144
Erwinia uredovora 231 F. oxysporum f. sp. lycopersici
Erysiphe graminis 197, 201 3, 68, 143, 278
Eucalyptus 196, 294 F. oxysporum f. sp. pisi 66,
Eudarluca caricis 230, 232 105, 111
exotic species 294, 300, 307 F. oxysporum f. sp.
radicis-lycopersici 231
F. oxysporum f. sp. vasinfectum
Festuca 36 105, 111, 112, 273, 275,
F. arundinacea 36, 41 278
F. pratensis 42, 51, 52 F. sambucinum 105, 107
F. rubra 51, 52, 291 F. solani 66
fitness 28, 30, 127, 203, 227, 228, F. udum 279
232, 297, 298, 338
flax 135, 144
Folsomia candida 71 Gaeumannomyces 67, 73
Folsomia fimetaria 65 G. graminis tritici 67
Folsomia hidakana 65 Gastrophysa viridula 197, 199, 203,
fungi 204, 205, 207
fungal community 5, 75, 131 genetic diversity 21, 25, 42, 216
fungal community structure 70, genetic modification 163, 167
77 genetic recombination 189
fungal competition 252, 258, 259 genetic resistance 56
fungal endophytes 35, 37 genetic variation 296
fungal mutualists 35 Geranium robertianum 74
fungal pathogens 31, 128 Gigaspora margarita 271
fungal populations 28, 31, 32 Gliocladium virens 76, 77
fungal toxins 36 Globodera pallida 107, 111
fungivores 69 Globodera rostochiensis 111
fungivorous nematodes 64, 66 Gloesporium lunatum 193
Fusarium 4, 65, 66, 67, 75, 76, 106, Glomus 271, 292
112, 133, 196, 201, 210, 273, G. etunicaturn 271
275 G. intraradices 272
F. avenaceum 105, 107 Glummus mosae 271
F. candida 73 Gnomonia leptostyla 69
F. culmorum 123 Gossypium spp. 272
F. equiseti 76 grazing 5, 36, 198
F. graminearum 198, 274 Gremmeniella abietina 195, 196
F. moniliforme 105, 200 group testing 310, 311, 314, 316, 322
F. oxysporum 6, 8, 72, 73, 75,
105, 131, 132, 133, 134,
135, 137, 139, 140, 142, Heliothis virescens 200, 202
143, 146, 200, 201, 278, Heliothis zea 203
292, 292 helper-dependent virus complexes 6,
F. oxysporum f. sp. cubense 18, 25, 184
278 herbivory 4, 35, 231
360
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Index 349
Heterodera 274, 290 Longitarsus jacobaeae 211

H. cajani 272
Heterorhabditis bacteriophora 52
hierarchial sampling scheme 316, 317, Macrophomina phaseolina 273, 275
318 Macrosiphum avenae 197
Hippophaë rhamnoides 290, 295 Magnaporthe grisea 202
Holcus mollis 52 maize 210, 275
Homoptera 16, 17 maize rough dwarf virus 332
Hoplolaimus galeatus 278 Marasmius androsaceous 70
host defence 105, 163, 168 mathematical models 9, 15, 18, 19,
host plant quality 201, 332, 339 150, 233, 340
host plant resistance 159, 202 Melaleuca quinquenervia 196
Hypericum perforatum 195 Melampsoridium betulinum 194, 201
hyperparasites 7, 31, 227, 228, 229, Meloidogyne 53, 274, 277, 278
231, 232, 233 M. graminis 44
hyperparasitism 76, 145, 227, 230, M. hapla 278
233 M. incognita 105, 110, 111, 112,
hypovirulence 2, 31, 232 272, 275, 278
M. javanica 278
M. marylandi 44, 53
induced resistance 6, 96, 104, 105, M. naasi 44, 54, 55
106, 107, 110, 141, 142, 143, melon 135, 181
145, 146, 160, 194, 197, 201, Merlinius brevidens 51
203 microbial competition 252
invasive plants 292, 300 microarthropods 64
invertebrate 4, 198 microbial community 94, 152, 160
invertebrate grazing 63, 77 Micrococcus agilis 94
invertebrates herbivores 41 mild strains 178, 180, 181, 184, 185,
186
mineralization 72
Juglans nigra 69 mites 6, 16, 64, 69, 196, 201, 231,
239, 249, 257
mite–fungus interactions 258
Kluyvera ascorbata 104 mitochondrial plasmids 27, 31
Kriga dandelion 290 models 2, 9, 17, 28, 29, 29, 31, 32,
Kummerowia stipulacea 292 286, 327, 334
Mortierella isabellina 74
Mucor 66, 123
Lactarius rufus 76 mutualism 4, 31, 35, 237, 238, 249,
Laetisaria arvalis 76 263
leafhoppers 16, 196 Mycena galopus 70
Leptographium terebrantis 259 mycoparasitism 2, 7, 123, 291
Listronotus bonariensis 41 mycophagous nematodes 66, 270
Lobesia botana 199 mycorrhizal fungi 4, 54, 63, 71,
Lolitrem 41, 44, 54, 55 73, 75, 77, 127, 194, 270,
Lolium 36, 38 285, 290, 291, 292, 296,
L. perenne 36, 41 298
Longidorus 22, 23, 274 Mycosphaercella laricinia 9, 201
361
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350 Index
Myrothecium roridum 210 O. minus 241, 245, 253, 258,

Myzus persicae 201 259, 262
O. novo-ulmi 31
O. piliferum 261
natural ecosystems 285, 298, 300 Opuntia 193, 215
nematodes 4, 6, 8, 32, 36, 64, 69, 96 Ostrinia nubilalis 104, 198, 210
nematode community 66
nematode populations 51, 52, 66,
72, 270, 275, 281 Paecilomyces lilacinous 270
nematode reproduction 53 Paenibacillus macerans 94
nematode resistance 276 Panicum sphaerocarpon 290
nematode–fungal interactions papaya ringspot virus 184, 187
269 parasitism 160, 237
nematophagous fungi 270, 296, 298 parasitic fungi 270
Nematophthora gynophila 270 parasitic genetic infections 32
Neochetina bruchi 210 parasitic weeds 8
Neochetina eichhorniae 210 Parthenium hysterophorus 211
Neotyphodium 36, 38 Passiflora mollissima 211
N. coenophialum 38, 43 Pasteuria penetrans 296
N. lolii 38, 43 pathogen suppression 296
N. uncinatum 42 pathogen vector reservoirs 327
Neurospora crassa 30 pathogen-derived resistance 179
Nicotiana benthamiana 179 pathogenic fungi 76, 298
nitrogen fixation 108 Paxillus involutus 76
nitrogen-fixing bacteria 87 Penicillium 64, 66
nitrogen mineralization 68, 69, 76, 77 peramine 41, 44
non-culturability 88, 89 Perapion antiquum 209
non-pathogenic strains 131, 132, 134, Phalacrus substriatus 4
137, 138, 140, 141, 142, 143, Phaseolus vulgaris 69, 98
144, 145, 148, 149, 152 Phellinus weirii 287
non-persistent transmission 16, 181, Phloeospora mimosae-pigrae 211
184 Phomopsis emicis 209
nurseries 318, 327 Phratora polaris 194
nutrition Phyllobacterium rubiacearum 110
nutrient acquisition 63 phyllospheres 93, 96, 109
nutrient availability 334 Phytophthora 67, 275, 286, 287, 292,
nutrient mineralization 63 294
nutrient sink 277 P. cambivore 294
nutritional quality 199 P. cinnamomi 287, 294
nutritional substrate 257 P. erythroseptica 201
P. fragariae 294
P. infestans 106, 107, 112
Olpidium 23, 24 P. nicotianae var. nicotianae 68
O. armatus 76 P. parasitica 201
O. brassicae 24 Pinus edulis 4
O. encarpatus 76 Pinus sylvestris 195, 196
Ophiostoma 9, 239 plants
O. ips 259 plant communities 286
362
30 May 2001 16:04:12
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Index 351
plant defence 75, 87, 97, 104, P. syzygii 161

107, 108, 114, 143, 231, Pseudoplusia includens 198, 212
232 Pseudotsuja menziesii 287
plant growth promotion 113 Puccinia carduorum 207
plant growth substrates 94 Puccinia expansa 211
plant health 1, 87, 88, 106, 113, Puccinia lagenophorae 199, 208
271, 318 Puccinia monoica 3
plant nutrition 71 Puccinia poarum 199
plant parasitic nematodes 9, 22, Pythium 65, 67, 73, 273, 275, 286,
97, 105, 270, 285, 291, 287, 290, 293
294, 295, 296, 298, 299 P. aphanidermatum 275
plant pathogenic bacteria 95 P. irregulare 292
plant pathogenic fungi 63, 72, 73, P. oligandrum 231
75, 77, 122, 123, 127, 194, P. ultimum 125
199, 227, 229, 234
plant population dynamics 286
plant species diversity 297 quorum sensing 125
plant virus diseases 15, 17
Plantago lanceolata 290
Plasmodiophora brassicae 24, 68, 273 Radopholus similis 271, 278
plasmodiophorid fungi 6, 23 Ralstonia 106
Pnyxia scabiei 67 R. solanacearum 7, 159, 163,
Polymyxa 24 164
P. betae 24 Ramularia rubella 197, 212
P. graminis 24 red clover 93, 113
potato 111, 163, 165, 169 Rhinocyllus conicus 207
potato virus X 179 Rhizobium 98, 113
Potyvirus 18, 178, 184 R. etli 93, 101, 107, 111
Pratylenchus 53, 273, 275, 277, 290 R. leguminosarum 108
P. pratensis 51 R. trifolii 98
P. scribneri 51 Rhizobium–legume 87, 96
P. thornei 51, 274 Rhizobium–legume symbiosis 95
predisposition 215, 277 Rhizoctonia 65, 66, 67, 68, 73, 97,
Pristiphora erichsonnii 201 275
Proisotoma minuta 64, 76 R. solani 3, 64, 65, 66, 67, 68, 97,
propagation 319, 320, 324, 325 98, 105, 273, 275, 277,
Prunus serotina 287, 293, 300 292
Pseudomonas 93, 97, 203 Rhizopus 66
P. aureofaciens 99, 125 R. oryzae 233
P. cichorii 110 rhizosphere 5, 76, 77, 93, 94, 96, 105,
P. fluorescens 95, 96, 97, 104, 107, 109, 110, 112, 113, 114,
105, 106, 107, 111, 112, 122, 127, 131, 160, 269, 277,
113, 125, 140, 143, 160 277
P. putida 107 rhizosphere bacteria 124
P. savastanoi pv. savastanoi 161 rhizosphere communities 93
P. solanacearum 107 rhizosphere population 109
P. syringae 104, 202 Rhopalosiphum padi 21, 42
P. syringae pv. lachrymans 104, Rhopalosiphum poae 42
112 roguing 17, 24
363
Z:\Customer\CABI\A3943 - Jeger+Spence\A4039 - Jeger and Spence #F.vp
11 June 2001 15:29:12
352 Index
roots Solanum tuberosum 160

root knot nematodes 44, 106, southern pine beetle 237, 239
110, 111, 163, 275 soybean 108, 113, 203, 212, 271
root lesion nematodes 51, 52, 54, specificity 23, 29, 75, 88, 109, 110,
55 111, 113, 114, 131, 152, 188,
root parasitic nematodes 4 296, 298
root pathogens 54 specific infectivity 187
root-feeding grubs 42, 43 specific interactions 279
root-feeding nematodes 44 Sphingomonas thalpophilum 110
Rotylenchus 273 split root experiments 142, 278
R. reniformis 275 Spodoptera eridania 200
Rumex 199, 207, 210, 211, 216 Spodoptera exigua 202
R. crispus 197, 199, 200, 204, Spodoptera frugiperda 201
205, 206, 207 Spongospora subterranea 24
R. obtusifolius 197, 200, 203, 204, Sporidesmium sclerotivorum 229
205, 206, 212 Springtails 64, 71
stress 5, 35, 37, 39, 53, 113, 184,
196, 216
Sameodes albiguttalis 210 Striga 8
sampling protocols 320, 327 succession 285, 286, 287, 290, 296,
sampling scheme 309, 310, 311, 314, 297, 298, 299
315, 317, 326 sugarcane 92, 103
saprotrophic fungi 63, 70, 76, 77, 123, suppressive soils 67, 137, 152, 160
124, 160, 170 symbiosis 39, 42, 55, 87, 89, 238
Scheloribates axumaensis 65 symbiotic interaction 55
Sclerotinia sclerotiorum 195, 196, 233 symbiotic organisms 262
Sclerotium rolfsii 105 Syncephalis californica 233
Scytonema ocellatum 125 Synchitrium endobioticum 273
Senecio 211 synergism 2, 4, 187, 189, 215, 296
S. jacobaea 211 synergistic effects 204, 207, 216, 274,
S. vulgaris 199, 208, 212 275, 280
Septoria passiflorae 211
Serratia marcescens 105, 127
severe strains 178, 180, 181, 183, Tagetes patula 160
185, 187 Tarsonemus 249, 258
Sinella curviseta 65 Tetranychus urticae 201
Sitobion avenae 20, 21 thrips 6, 16, 198
soil tobacco 163
soil abiotic characteristics 151, tobacco mosaic tobamovirus 22, 23,
152 202
soil communities 131, 290 tobacco mosaic virus 201
soil nitrogen 212 tobacco ringspot nepovirus 22
soil nutrients 271 Tobamovirus 178, 179
soil pathogen complexes 291, 296 tomato 111, 135, 143, 146, 163, 168,
soil suppressiveness 131, 137, 186, 187, 231, 333
144, 151, 298 tomato bushy stunt tombusvirus 23
soil-borne disease fungi 64, 66, tomato leaf curl virus disease 333
77, 108, 272, 296 tomato mosaic virus 186
Solanum commersonii 159 Tombusviridae 24
364
30 May 2001 16:04:13
Index 353
toxins 39, 43, 54, 54, 55, 77, 103, vegetative incompatibility 3, 27, 28,
133, 200 29, 30, 31, 32
Toxoptera citricida 308, 313, 315, 318, vegetative planting material 92, 94
324, 326 Venturia rumicis 197, 212
tree pathogens 239, 241 Verticillium 66, 67, 106
Trialeurodes vaporariorum 19, 202 V. albo-atrum 105, 200
Trichoderma harzianium 8, 76, 124 V. chlamydosporum 270
Trichodorus 22, 23 V. dahliae 108, 273
Trichosirocalus horridus 207 Vibrio harveyi 125
Trientalis europaea 194 virulence 31, 163, 232, 239, 245,
trophic interaction 232, 269 286, 339
Tsuga heterophylla 287 viruses
Tussilago farfara 199, 200 virus coat protection 20, 23, 24
Tylenchorhynchus 51, 273 virus detection 317
Tylenchulus 274 virus multiplication 178
Tylenchulus semipenetrans 271 virus–plant interactions 18
Tyria jacobaeae 200, 208, 211 virus testing 322
virus titre 339
virus transmission 2, 6, 17, 286,
Uganda variant geminivirus 331, 334
332 virulence 338, 339, 340
Ulocladium atrum 8 Vulpia ciliata 75, 292, 298
Urocystis trientalis 194
Uromyces appendiculatus 69
Uromyces rumicis 197, 199, 203, 207, watermelon 142, 181, 184, 198
214 weed biocontrol 193, 195, 207, 210,
Uromyces viciae-fabae 200 211, 212
weevils 22, 207, 209, 210, 211
wheat 95, 135
vectors 9 whiteflies 5, 16, 331, 333, 339
vector associations 196
vector behaviour 20, 324, 325
vector emigration 334 Xanthium spinosum 195
vector feeding behaviour 21, 25 Xanthomonas campestris 104, 107
vector feeding period 19 Xanthomonas campestris pv. campestris
vector phylogeny 6 104
vector population 335, 339, 340 Xanthomonas oryzae pv. oryzae 161
vector population dynamics 18 Xanthomonas transluscens pv. graminis
vector transmission 15, 339 161
vector-borne 307 Xiphinema 22, 23, 274
vector-mediated spread 325
vegetation processes 290, 291, 299
vegetative compatibility 3, 28, 134, zucchini 7
135 zucchini yellow mosaic virus 181
365
30 May 2001 16:04:13

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Azospirillum 108, 109 Botryllus schlosseri 31

Clavibacter xyli subsp. cynodontis 104 Diabrotica undecimpunctata 198

Erwinia amylovora 104, 161 F. oxysporum f. sp. cucumerinu

Heterodera 274, 290 Longitarsus jacobaeae 211

Myrothecium roridum 210 O. minus 241, 245, 253, 258,

plant defence 75, 87, 97, 104, P. syzygii 161

roots Solanum tuberosum 160

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