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RECEIVED JUNE 29, 2012; REVISED OCTOBER 3, 2012; ACCEPTED OCTOBER 10, 2012
Abstract. The condensation reaction between carbohydrazide and salicylaldehyde in different solvents
gave mono(salicylidene)carbohydrazide (1). The structure of 1 in solution has been determined by using
experimental (NMR and UV spectroscopies and Mass spectrometry) and quantum chemical (DFT) meth-
ods. It has been demonstrated that 1 adopts the hydroxy-one tautomeric form which is in accordance with
previously published results for the related systems. Changes in NMR chemical shifts and calculations
have pointed towards a formation of intra- and intermolecular hydrogen bonds, the later being weaker and
easily broken at higher temperatures. These results can further be exploited for better understanding of the
role hydrogen bonds can play in bioactivity of related derivatives. (doi: 10.5562/cca2123)
Keywords: mono(salicylidene)carbohydrazide, hydrogen bonding, NMR and UV spectroscopy, mass
spectrometry, quantum chemical calculations
†
This article belongs to the Special Issue devoted to the 85th anniversary of Croatica Chemica Acta.
* Author to whom correspondence should be addressed. (E-mail: pnovak@chem.pmf.hr)
452 P. Novak et al., Synthesis, Structural Characterization and Hydrogen Bonding of Mono(salicylidene)carbohydrazide
Solution of 1 for acquiring MS spectra was pre- Table 1. 1H and 13C NMR chemical shifts for 1 in DMSO-d6
pared by dissolving 1 mg of solid in 0.1 cm3 of DMSO, and DMF-d7 at ambient temperature
and adding 0.9 cm3 of methanol.
δ / ppm (DMSO) δ / ppm (DMF)
Atom 1 13 13
UV Spectroscopy H C C(a) 1
H 13
C
α 8.20 140.05 151.37 8.46 -
UV-Vis spectra in the spectral range from 250 to 500
nm were acquired by means of a Varian Cary 3 spec- 1' 10.40 10.99
trometer using conventional quartz cells (10×10 mm). 2' 157.30 162.55 157.24
Stock solution of 1 was prepared by dissolving 3' 7.90 8.05
weighted solid in DMSO. The working solutions were 4' 4.12 4.32
prepared in 10.0 cm3 flask by adding stock solution, 1 120.49 125.70 120.01
appropriate amount of water and DMSO, resulting in
2 156.60 168.14 157.00
the mixed solvents of the volume ratios V(DMSO)/
V(H2O) = 9/1 to 1/9. 3 6.84 116.46 122.97 6.95 116.25
4 7.18 130.61 138.54 7.25 130.27
Quantum Chemical Calculations 5 6.81 119.62 125.73 6.90 119.22
All quantum chemical calculations were performed using 6 7.66 128.12 138.25 7.61 128.68
the Gaussian 09 program package.19 Geometry optimiza- OH 10.40 10.53
tion for ground and transition states were (a)
Calculated GIAO 13C chemical shifts (with respect to TMS)
performed at the B3LYP/6 311++G(d,p) level of the theo- at the B3LYP/6-311++G(d,p) level of theory.
ry.20,21 In order to increase numerical accuracy, verytight
optimization convergence criteria was used while two- 1 in solution two-dimensional NOESY sequence was
electron integrals and their derivatives were calculated by applied. Owing to a very low solubility of 1 in most of
using the pruned integration grid having 99590 points. For NMR solvents, the spectra were recorded only in
all optimized structures harmonic frequencies were calcu- DMSO-d6 and DMF-d7 solutions. The chemical shifts in
lated to insure that obtained geometries correspond to the two solvents are very similar and are given in Table 1.
local minimum (or maximum) on the potential energy Calculated GIAO 13C chemical shift shows a good
surface. Solvation effects were incorporated in the calcula- agreement with the experimental values confirming our
tions using the reformulation of polarizable continuum initial assignments. Systematic differences in calculated
model (PCM)22,23 known as integral equation formalism shifts emerge due to a balance between the accuracy
(IEFPCM) of Tomasi and coworkers.24–27 The standard determined by the method used and computational costs.
Gibbs energies of binding was calculated at T = 298.15 K As already mentioned, 1 might exist in several
and p = 101325 Pa by subtraction of Gibbs energies for tautomeric forms shown in Figure 1. Additionally, the
separate molecules from the Gibbs energy of complex. keto-tautomer in the benzene ring is also possible but it
Isotropic shieldings in vacuo and in solvent were calculat- was excluded on the basis of proton and carbon chemi-
ed by applying the gauge-independent atomic orbital cal shift values. The molecule can also adopt cis- or
(GIAO) and PCM GIAO28,29 methods on the previously trans-configuration around the C=N double bond. The
optimized geometries using the same basis set as that trans-isomer is stabilized by an intramolecular OH···N
above. Chemical shifts were calculated with respect to hydrogen bond. On the basis of NMR spectral analysis
tetramethylsilane (TMS). no trace of cis-isomer was found.
The presence of COSY correlation peak between
RESULTS AND DISCUSSION NH2 protons and neighboring NH3' proton and NOESY
cross peak between CHα and NH1' indicate that the
Synthesis dominant form in both solvents is tautomeric form 1a.
Signals of all OH and NH protons are significantly
The condensation reaction in methanol between carbo-
broadened indicating the presence of hydrogen bonding
hydrazide and salicylaldehyde in 1:1 molar ratio afford-
and chemical exchange. The large up-field shift of OH
ed mono(salicylidene)carbohydrazide.
over 10 ppm reflects strong OH···N intramolecular hydro-
gen bond (Figure 1).
NMR Assignments and Structure Elucidation
NMR chemical shifts of OH and NH1' protons
Proton and carbon chemical shifts were assigned by a show only very small changes with different solution
combined use of one- (1H, APT or 13C proton decou- concentrations, as previously reported for related sys-
pled) and two-dimensional NMR experiments (COSY, tems,12,14 corroborating that intramolecular hydrogen
HSQC and HMBC). In order to assess conformation of bonds dominate here.
320 (1.2553)
DMF 288 (1.5565)
281 (1.5986)
Figure 3. MS/MS spectrum of 1 (m/z = 195.1) at 10 eV.
ΔrG° / kJ mol–1
Molecule
in vacuo DMSO (εr = 46.826)
1a 0.00 0.00
1b 36.45 56.56
1c 62.25 76.31
CONCLUSION
lations supported experimental findings based on NMR 17. P. Novak, K. Pičuljan, T. Biljan, T. Hrenar, M. Cindrić, M.
measurements that the intermolecular hydrogen bonds Rubčić, and Z. Meić, Croat. Chem. Acta 80 (3–4) (2007) 575–581.
18. T. Jednačak, P. Novak, K. Užarević, I. Bratoš, J. Marković, and
with solvent molecules are much weaker than the M. Cindrić, Croat. Chem. Acta 84 (2011) 203–209.
intramolecular ones and hence easier to break at higher 19. M. J. Frisch, G. W. Trucks, H. B. Schlegel, G. E. Scuseria, M. A.
temperature. Robb, J. R. Cheeseman, G. Scalmani, V. Barone, B. Mennucci,
G. A. Petersson, H. Nakatsuji, M. Caricato, X. Li, H. P.
Acknowledgements. We thank the Ministry of Science, Educa- Hratchian, A. F. Izmaylov, J. Bloino, G. Zheng, J. L.
tion and Sports of the Republic of Croatia (Project No. 119- Sonnenberg, M. Hada, M. Ehara, K. Toyota, R. Fukuda, J. Ha-
1191342-1083 and 119-1191342-1082) for the financial sup- segawa, M. Ishida, T. Nakajima, Y. Honda, O. Kitao, H. Nakai,
port. T. Vreven, J. A. Montgomery, Jr., J. E. Peralta, F. Ogliaro, M.
Bearpark, J. J. Heyd, E. Brothers, K. N. Kudin, V. N. Staroverov,
R. Kobayashi, J. Normand, K. Raghavachari, A. Rendell, J. C.
Burant, S. S. Iyengar, J. Tomasi, M. Cossi, N. Rega, J. M.
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