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REVIEW

CURRENT
OPINION ICU management based on big data
Stefano Falini a, Giovanni Angelotti b, and Maurizio Cecconi a,c

Purpose of review
The availability of large datasets and computational power has prompted a revolution in Intensive Care.
Data represent a great opportunity for clinical practice, benchmarking, and research. Machine learning
algorithms can help predict events in a way the human brain can simply not process. This possibility comes
with benefits and risks for the clinician, as finding associations does not mean proving causality.
Recent findings
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Current applications of Data Science still focus on data documentation and visualization, and on basic
rules to identify critical lab values. Recently, algorithms have been put in place for prediction of outcomes
such as length of stay, mortality, and development of complications. These results have begun being
implemented for more efficient allocation of resources and in benchmarking processes, to allow
identification of successful practices and margins for improvement. In parallel, machine learning models
are increasingly being applied in research to expand medical knowledge.
Summary
Data have always been part of the work of intensivists, but the current availability has not been completely
exploited. The intensive care community has to embrace and guide the data science revolution in order to
decline it in favor of patients’ care.
Keywords
benchmarking, big data, clinical prediction model, data science, intensive care medicine

INTRODUCTION Attempts to improve patients’ safety via check-


We have been raised with the idea of increasingly lists [4,5] have shown to improve outcomes, but this
capable machines to help us with manual labor approach cannot be applied to every single medical
because it is a phenomenon that had already largely diagnosis or treatment that physicians have to per-
taken place before we were born. We have grown form. Patients are different from each other, and
accustomed with computers supporting us with cal- physiology is in a continuous state of change. A
culation power and storage capacity because it has resource capable of identifying the most relevant
occurred gradually in the arc of a few decades. In information for ‘this patient, at this moment’ would
contrast, most of us are still skeptical to the perspec- be extremely welcomed by clinicians at the bedside.
tive of artificial intelligence, likely because we feel it This is where the big hope for artificial intelligence
has arrived too recently, and too abruptly. Mostly, support for clinical practice stands. But where are we
we cannot understand it: can machines provide us today? And before artificial intelligence becomes a
with reasoning power? Could it mean they have standard tool in our ICUs, what can we do with the
more to spare, more than we do? available data?
Isaac Asimov’s first rule or robotics ‘A robot may It is ironic that despite the countless articles on
not injure a human being or, through inaction, the subject, clinicians are still intimidated when the
allow a human being to come to harm’ [1] is remark- topic of artificial intelligence is brought up. After all,
ably similar to the primum non nocere principle of
good clinical practice. As physicians, we swear not to a
Department of Anesthesia and Intensive Care, bData Science Core
harm our patients [2]. Nevertheless, unintentional Facility, Humanitas Clinical and Research Center, Rozzano and cHuma-
mistreat happens frequently, with some statistics nitas University, Milano, Italy
reporting up to a third of hospital deaths linked Correspondence to Stefano Falini, c/o Istituto Clinico Humanitas, Via
to some form of medical error [3]. Healthcare pro- Alessandro Manzoni 56, 20089 Rozzano, Italy. Tel: +39 335 812 6498;
fessionals often make mistakes because they clearly e-mail: stefano.falini@humanitas.it
cannot see the information laid in front of their Curr Opin Anesthesiol 2020, 33:162–169
eyes. DOI:10.1097/ACO.0000000000000834

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ICU management based on big data Falini et al.

implicit attributes, so it should not come as a sur-


KEY POINTS prise that advanced mathematical models and com-
 In medicine, appreciation of data is key to gain real plex deciphering algorithms are required to make
knowledge. If properly trained, computer will enable us sense of such tangled mess.
to make sense of the overwhelming amount that we are The discipline dedicated to the task is called data
accumulating nowadays. science, and it draws concepts from mathematics,
statistics, informatics, and computer science. It
 The Intensive Care community has to embrace and
guide the Data Science revolution to provide better relies on machine learning, which is, in most cases,
care to critical patients and improve their outcomes. just a fancier way to refer to statistical modelling
&&
[9 ]. In a broader sense, it defines the set of meth-
 There is an urgent need for data sharing and common ods, processes, and algorithms aimed at extracting
data dictionaries: this will allow not only better training
knowledge from structured and unstructured data.
of models, but also more generalizability and greater
external validation. Machine learning models are basically frameworks
on which, by fitting certain parameters, the com-
puter tries to draw inference about the original
data. Fitting a model is similar to adapting the
equation of a straight line to impose its passage in
they have witnessed the breakthrough that the data two points, by adapting the parameters of slope and
science revolution has brought in the latest years to y-axis interception.
most other fields. The new thing machines are sup- For most projects, innumerous models can be
plying is novel insight into the data that we have trained and fit. Something can be read in this abun-
been collecting, better analytical power to interpret dance, i.e. that no method is inherently superior to
patterns, and more efficiency at extrapolating the others on all datasets. An algorithm may in fact
knowledge from our sources. It’s not that we hadn’t excel in certain contexts, but lack in others. Assess-
grasped that data had value: it is that computers are ing the performance of several models in relation to
helping us understand its magnitude. the required goal, e.g. clinical prediction, becomes
&
paramount in order to choose the best one [10 ].

MAKING SENSE OF DATA: DATA SCIENCE


The realization that true knowledge can only be HISTORY OF MEDICAL DATA
achieved through effective measurement and The first documented medical record is inscribed
translation into data can be traced back for centu- on papyrus and it is from Ancient Egypt, in the year
ries, and it was certainly evident to William Thom- 1600 BC [11]. By Hippocrates’ times, the idea of
son, commonly known as Lord Kelvin. Beyond his recording data (in this case, notes) about single
contributions on thermodynamics, he is famous patients was formed. Accordingly, the alleged
for stating: ‘I often say that when you can measure founder of medicine must have been already aware
what you are speaking about, and express it in of the value of keeping track of patients’ history and
numbers, you know something about it; but when vitals to provide them with better care, as he sug-
you cannot [...] you have scarcely, in your gested that such documents be stored and con-
thoughts, advanced to the stage of science, what- sulted for future treatment of the same patient
ever the matter may be’ [6]. The American statisti- [12]. Following this principle, medical charts have
cian William Edwards Deming summarized these kept growing, and with electronic health records
concepts further: ‘Without data, you are just (EHRs) they nowadays record thousands of data
another person with an opinion’ [7]. points per patient.
Additional meaning emerges when considering We are living a paradox in the evolution of
large amounts of data at once. The expression ‘big medical data: although in the past there was not
data’ is by now ostensibly familiar to everybody, yet enough data recorded from the available informa-
a formal definition has never been established and tion, these days there is no readily intelligible
the true concept often slips those who have not been information from the overwhelming amount of
actively investing in the topic. A fairly practical and available data. Processing this data is our current
intuitive way to describe it is by referring to datasets &&
challenge [13 ].
whose size, complexity and dynamic nature are Medicine has distinguished itself from other
beyond the scope of traditional analysis methods industries by being among the first to recognize
[8]. The lack of structure of the information con- the value of data [14]. The past decades have marked
tained in such datasets, its unruliness, and the fact of increasing belief in the need for experimental proof
not being immediately intelligible are all considered to guide clinical practice and the birth of an entire

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Intensive care and resuscitation

movement of evidence-based medicine [15]. For i.e. the parts where engineers had found most dam-
years, the imperative has been to only accept evi- ages. Wald realized that this approach was flawed as
dence of the highest quality, that is randomized it focused only on the planes that made it the
controlled trials (RCTs) planned with statistical ground, while the truly critical injuries had pre-
rigor, thoroughly conducted, and possibly with an vented airplanes to land, making their data unavail-
ever-increasing number of participants. Unfortu- able for inspection. Engineers were just making the
nately, these expectations have proved hard to airplanes heavier without realizing where the real
meet: the proportion of clinical interventions based problem was (engines and cockpit) [23].
on quality evidence rarely exceeds 50% [16], and Reversely, it is undeniable that with proper
earlier estimates report figures even lower than 20% observation and empirical testing improvement
[17]. Recently, the disadvantages of pursuing exclu- can be achieved quickly. One of the first applica-
sively this approach have been pointed out. tions of Data Science that led from observations to a
Although still considered the strongest study design precise intervention is the cholera outbreak in Broad
to eliminate confounders, RCTs have been criticized Street, London in 1854. Anesthesiologist and epide-
for lacking external validity; also, they impose sig- miologist John Snow was able to identify the asso-
nificant costs and long periods of observation ciation between cholera deaths and the use of water
&
[18,19 ]. Although it would be nice to test every from a specific water pump. His hypothesis found
single intervention with trials, it is simply not feasi- confirmation when the simple intervention of
ble. They cannot represent the only framework for removing the water handle solved the outbreak [24].
advancing our knowledge. Although there are reports of a very high degree
of correlation between findings of randomized and
nonrandomized trials [25,26], it would be a mistake
EXTRAPOLATING KNOWLEDGE IN to get rid of RCTs. Research has to find a way to work
MEDICINE with observational studies and trials in a synergic
When, in the 1960s, the first prototype of EHR was way [27]. Big Data needs to meet Big Trials. Data
elaborated, the premise was to ease access to patient Science could help stratify in a more precise fashion
information. Since then, advancements and avail- the phenotypes of patients in which interventions
&
ability of computing power, storage capacity and can be tested better and faster [28 ].
networks have allowed EHRs to grow exponen-
tially, and become increasingly more advanced
and pervasive. Nowadays, they can capture many INTENSIVE CARE DATA
aspects of patients’ physiology in a progressively In general, EHRs mostly collect text data, such as
automated fashion [11]. These features, coupled clinical notes, and, to a minor extent, structured
with their ongoing diffusion, have allowed massive data, such as vital parameters and lab results. For
amounts of patient data to become available for noncritical patients, the rate at which data is entered
retrospective studies. into EHRs is relatively low, and only comprise rou-
Longitudinal analysis of EHRs has reinstated the tinely vitals check followed by an assessment note
once deprecated concept of observational studies from the clinician. On the contrary, in ICUs, where
[20]. Until not so long ago, these used to be relegated patients’ health is at risk and must be judiciously
to small physiological studies, or to evaluate inter- kept under surveillance, routine checks are espe-
ventions in real-life scenarios, but have been cially frequent and vitals are continuously moni-
revamped after the criticism moved to RCTs, espe- tored in high resolution [29].
&
cially in ICU [21,22 ]. The innovation is that thanks For this reason, Intensive Care Medicine (ICM),
to the increasing adoption of EHRs, they can now be compared with other medical specialities, is partic-
run with very large samples. In comparison to RCTs, ularly keen on generating large volumes of data.
observational studies are appealing for higher effi- True, it does not yet embed the -omic components
ciency, lower costs, limited research times, that oncology or haematology can boast, but it is
and reproducibility. likely only a matter of time: studies that focus on the
On the other hand, they are by definition non- different responses to therapies based on gene
randomized, and theoretically more prone to bias. expression profiling are already being published in
&
Indeed, association and causality can be difficult to swarms [30,31 ,32]. Likewise, it does not offer as
discriminate only by observations. During World much high-resolution imaging as radiology or
War II, statistician Abraham Wald helped the US pathology. Yet the instability that characterizes
Navy solving the problem of reinforcing war air- the typical ICU patient requires uninterrupted mon-
planes after air battles. Before his contribution, air- itoring of physiological parameters, frequent blood
crafts were being reinforced on wingtips and body, sampling, multiple clinical examinations per day,

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ICU management based on big data Falini et al.

Table 1. Types of data recorded regarding ICU patients and their frequency

Type Density Examples

Demographics Single value Age, sex, height, BMI, comorbidities


Blood tests At least 1/day Electrolytes, blood count
Finger stick test 0–1 times/hour Glucose if decompensated diabetes
Blood-gas analysis 1–12 times/day pH, PaCO2, PaO2, electrolytes, lactate levels
Bedside radiology 2–7 times/week Chest X-ray
Advanced imaging 0–3 times/week CT scan, MNR scan
Microbiology 1–5 times/week Culture from specimens
Intermittent monitoring 0.5–12 times/hour Noninvasive blood pressure measurement, urine output
Continuous monitoring 1–30 times/second ECG, SpO2, temperature, invasive arterial pressure, ventilator curves
Ventilatory settings 1–20 times/day Mode of ventilation, end-expiratory pressure, respiratory rate
Bolus medication dose 1–6 times/day Antibiotics, proton pump inhibitors, corticosteroids
Continuous infusion dose 1 times/minute Noradrenaline, propofol, maintenance fluids
Clinical evaluation 3–12 times/day Doctor’s notes, nursing
Special interventions 0–5 times/week Admission, discharge, CVC insertion, surgery

and often even recurrent X-rays and scans. This at identifying suboptimal processes and at generat-
attitude results in a huge amount and variety of ing ideas for improvement.
data generated by every single patient, ranging from Similarly, experts and medical societies have
notes to waveforms and structured data (Table 1). explicitly endorsed the adoption of quality indica-
This immense resource, is, as a matter of fact, tors and performance assessment of ICUs [34,35].
heavily underused. It appears in the fact that, on Intuitively, it is only by measuring performance that
average, humans can process no more than 3 or 4 upgrades from baseline can be appreciated, and thus
independent variables at the time [33]. Decision that the efficacy of certain interventions be recog-
making in ICM is therefore limited to a relatively nized and quantified [36]. Furthermore, there is
small number of variables, indicated by clinical increasing evidence arguing that investments in this
guidelines or picked by physicians’ experience, direction are cost-effective and have been a major
and ultimately chosen as key indicators of health force in improving outcomes of critical patients
deterioration. This limitation does not hold for by minimizing diagnostic error and therapeutic
&
computers. Indeed, machine learning shines in this harm [19 ].
context, as it can see through thousands of variables Despite the positive trend toward better patient
in a very short time, and could be of help with at outcomes, it appears in fact that the choice of func-
least two critical aspects in intensive care: prompt- tional indicators for benchmarking is far from
ness of response and feature selection. straight-forward, and their implementation is rife
with challenges [37]. For example, standardized
mortality ratios have long been used for this pur-
BENCHMARKING INTENSIVE CARE pose, yet they rely on prognostic scores that have
The term benchmarking originates from the field of ultimately failed to test for external validation, and
land surveying, where it refers to the practice of thus they have been criticized for substantial bias;
carving horizontal marks in stone structures to form the same can be said about ICU length of stay, too
a ‘bench’ for the placement of a levelling rod. Such heavily influenced by the availability of step-down
benchmarks ensure that levelling rods can be repo- units or extra-hospital postacute care facilities [38].
sitioned identically in future occasions, and conse- Big data tools, in the form of predictive models or
quently that comparison between measurements cluster analyses, are expected to improve this aspect
made at different times can be accurate. The expres- by allowing more accurate profiling of patients and
sion has then spread to the business sector, where it better corrections for the case-mix bias [39].
broadly indicates the custom of measuring the per-
formance of a company or its processes against those
of the competitors, and more typically of the indus- ISSUES IN THE IMPLEMENTATION
try leaders, which are thus taken as reference. By If it truly could be so helpful and in so many ways,
using a series of standardized indicators, it is aimed why is not machine learning already in use in ICU?

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Intensive care and resuscitation

The first issue is that algorithms need data to be outputs must therefore be inspected with extra
viable. For some models, especially those falling in care to make sure that learning is being done coher-
&
the ‘deep learning’ umbrella, data from millions of ently [45 ]. Hence, clinical input from physicians
patients. Such amounts are only now starting to be will continue playing a major role for the full
available. Often all this data is collected exclusively development pipeline of artificial intelligence
for administrative purposes in hospital servers, or is algorithms, as in them resides the experience and
secured by EHR manufacturers, and not made avail- generalized knowledge that current technology
&&
able to the extended research community. It is only cannot sustain [13 ,46].
recently that the researchers have had the opportu-
nity to work with vast ICU databases, first among all
the Medical Information Mart for Intensive Care III USE CASES
(MIMIC-III), developed by MIT’s Laboratory for Reports of machine learning algorithms in ICM have
Computational Physiology in collaboration with so far been copious, but so far limited to research
&& & &
Beth Israel Deaconess Medical Center in Boston [47 ], with very few exceptions [48 ,49 ]. Indeed,
[29]. MIMIC-III was a milestone in the field, offering barriers to the prospective implementation of learn-
structured and waveform data from more than 40 ing models are still holding strong, yet multiple
000 ICU patients. Afterwards, other major databases scenarios of application can be hypothesized.
were publicly released, such as the eICU, with more Assuming unsupervised, supervised, and reinforce-
than 200 000 admissions from several hospitals ment learning (Fig. 1), and data augmentation as the
&&
around the United States [40 ]. Among the latest major areas of machine learning research, some use
releases is Amsterdam UMC’s database, providing a cases can be found for each.
&&
first insight into the European population [41 ]. Unsupervised models (Table 2) are used to find
A second, greater, bottleneck in the application patterns in data and differ from supervised models as
of machine learning in ICM is the lack of standardi- they don’t require any outcome. These algorithms
zation. Different standards in data collection repre- compute distances between observations and then
sent a steep barrier to overcome, and ultimately infer a degree of similarity amongst those. The
translate into major difficulties when trying to concept of distance here can take several different
aggregate multiple data sets in a single workable meanings and formulations depending on the con-
database. Realistically, a solution to this problem text, but the key is to identify analogies between
can only be found by healthcare workers and data observations. For instance, responses to medications
scientists together. A shared infrastructure is yet to (i.e. vasopressors) are also a function of a patient’s
be developed, but signs of progress can be seen in the physiology, and not all patients respond in the same
identification of standards for the exchange of clin- manner. Clustering models could help in detecting
ical data [42]. Common ICU dictionaries are subgroups with similar responses to treatment,
largely awaited. based on additional covariates related to their
The third issue, partly a consequence of the first health history or parameters. Clusters would also
two, is the external validity of the analyses per- be of use to fine-tune doses and medications, thus
formed on such databases. For example, MIMIC- providing support to clinicians in the decision
III only stores data collected between 2001 and process.
2012 (time constraint), in the Boston area (geo- Supervised models, on the other hand, require
graphical constraint), and regarding mostly Cauca- an outcome or classification to be trained on. They
sian patients (variety constraint). It is hard to assess answer questions like ‘how likely is this observation
if models trained on such data could be reliable in to belong to class X?’, which can be easily turned in a
other contexts, and it is likely that they would favor prediction framework. Examples of supervised mod-
patients with characteristics similar to those of the els can be found in the yearly CinC/Physionet chal-
original data. Only when both handicaps of quan- lenges on physiological data, such as the automatic
tity and variety will be solved we will be able to talk classification of ECGs, or prediction of severe hypo-
&&
about true Big Data in ICU. The prospects are com- tension and sepsis [50 ,51,52].
pelling, major initiatives are being taken all around Reinforcement learning refers to a family of
the world, and the outlook is favorable as awareness models that falls somewhat in-between the previous
grows [43]. two. They learn from interacting in an environment
One final consideration regarding the aforemen- to take the action that yields to the highest reward.
tioned ‘correlation versus causation’ issue is due: as In a recent example, the titular ‘AI clinician’ is
already stated, when using observational data, it is reported learning the best strategy to maximize
not possible to assert the causality of events, survival of a septic patient by choosing between
&&
but only correlation amongst those [44]. Model supplying fluids and dosing vasopressors [53 ].

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ICU management based on big data Falini et al.

FIGURE 1. Three major types of machine learning paradigms. From top to bottom: in supervised frameworks the training set is
labelled and a prediction has to be made regarding a new value; unsupervised models find patterns in unlabeled data using
distances; in reinforcement learning, the agent tests actions and maximizes the reward function.

Finally, data augmentation models, namely gen- synthesized, and the generator, whose goal is
erative adversarial networks [54], leverage two com- deceiving the first. Ultimately, after training on
peting algorithms: the discriminator, whose goal is data, the generator should be able to create data
understanding if the output of the other is real or so similar to the original that the discriminator

Table 2. Paradigms of machine learning models and their application

Paradigm Techniques Scope Examples

Unsupervised learning K-Means Pattern discovery Identification of ICU patients with similar clinical trajectories
Hierarchical clustering Susceptibility of response to therapies
Biclustering Phenotypes of septic patients
Self-organizing maps
Supervised learning K-nearest neighbors Regression / prediction Prediction of hypotensive episodes
Linear regression Prediction of length of stay in ICU
Logistic regression Estimation of risk of mortality
Random forests Classification Assessment of sedation
X gradient boosting Prediction of survival
Neural networks
Reinforcement learning SARSA Policy discovery Weaning from mechanical ventilation
Deep Q network Optimal sepsis treatment
DDPG Antibiotic dosing strategy

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Intensive care and resuscitation

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Conflicts of interest Using Monte Carlo simulations, the authors demonstrate that syndrome-attribu-
There are no conflicts of interest. table risks of ICM diagnoses are often overestimated, and how this phenomenon
leads to underpowering of RCTs and ultimately to their often negative results: a
renewed focus on mechanistic research is seeked.
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The present review remarks the necessity of quality data to produce robust AI terms of mortality in septic patients. It is the first study addressing gene expression
models for clinical purposes. Open databases for research and the development of profiling in critically-ill adults receiving steroids and adds experimental evidence to
a collaborative form of clinical data science should be endorsed in this delicate the growing awareness that the ‘one size fits all’ approach is often not appropriate,
transition phase. and possibly a cause of many negative trials.

168 www.co-anesthesiology.com Volume 33  Number 2  April 2020

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ICU management based on big data Falini et al.

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