Академический Документы
Профессиональный Документы
Культура Документы
The B. Sc. Honours courses in Genetics shall comprise the courses on Genetics, Biophysics, Chemistry,
Biotechnology, Genetic Engineering, Computer Science and Engineering, Statistics, English and Economics .The
course is spread over four academic years in eight semesters. Each year is divided into two semesters. Final
examinations are held at the end of each semester and also there are in-course examinations. A student must have to
complete successfully at least 160 credit hours of courses to obtain the B.Sc. Honours degree. (A student, if he/she
is not a clearing graduate, has to register for at least 12 credits minimum and 30 credits maximum in a semester). A
student has to complete at least 36 credits hours in a year.
There will be marks for class participation, assignments and mid-semester examination and final examination for
which the distribution of marks is as follows:
The grading system consists of Letter Grading Point Average (GPA), Letter Grade; corresponding Grade Point will
be awarded as follows:
Absence from the final examination will be considered incomplete. The distribution of courses for respective
academic years and semesters is given below along with the detail of the courses.
Detailed Syllabus
Introduction: Historical background of genetics. Modern concept of genetics, Scope and branches, Application and
Importance of genetics in human society. Some important genetical terms. Heredity, Environment and the
continuity of life: Heredity and variation. Reproduction of living organism. The physical basis of Inheritance.
Genotype and Phenotype. distinguisihing heredity and environmental variation. Genotype and environmental
interaction. Mendelian genetics: life history of Mendel. Discovery of Mendel works. Experiment of Mendel work.
Mendels law of segregation and independent assortment. Exception of Mendelism: Modification of Mendelian
ratios. Lack of dominance, co-dominance, Heterodominance, Epistasis, interaction, lethal gene. Multiple factor
inheritance: Multiple allelism, pleotropism and cytoplasmic inheritance in animals, human and plants. Blood
groups inheritance in man and plasma protein polymorphism in man. Linkage and Crossing over: Linkage,
Crossing over, different kinds of linkage and crossing over and their significance, linkage groups. Factor affecting
the strength of linkage, cytological demonstration of crossing over. Linkage maps of Drosophila, chromosome map.
Sex determination: Cytological and genetic basis of sex determination. Different mechanism of sex determination in
plants, animals and its implication. Mutation: Defination, types of mutagen and mutation, characteristics, causes
and effects of gene mutation and mechanism. Chromosomal Aberrations: Types of structural and numerical
changes of chromosome and mechanisms. Genetical consequences of changing chromosome structure and number.
Books Recommended:
1. Verma, P.S. and Agarwal, V.K 1985.: Genetics (6th edn) S. Chand and Co. Ltd. New Delhi.
2. Gardner, E.J., Simmons, M.J. and Snustad. D.P. 1991. : Genetics (18th ed) John Wiley and Sons. New York.
3. Strickberger, M.W. 1968. : Genetics. McMillan, New York.
Introduction: Historical background of cell, cell discovery and organelles. Definition and modern concept of cell,
protoplasm theory. Cell types and structure: Eukaryotic and prokaryotic cells, differences between the two types of
cells. Typical structure of Eukaryotic and prokaryotic cell and their functions. Cellular organelles: Major cellular
organelles, composition, structure and function. Cell wall membrane, plasma membrane, nucleus, endoplasmic
reticulum, golgi bodies, mitochondria, chloroplast, ribosome, lysosome, cytoskeletal structure. Nucleus and
chromosome: Structure of nucleus, morphology and chemistry of chromosome. Special types of chromosome-
Polytene, Lampbrush, Sex, Iso-chromosomes and diplochromosomes, Karyotypes- Definition, characteristics,
variation and significance. Cell division: Types of cell division, steps of mitosis and meosis, Difference between the
two process, Abnormalities in mitosis and meosis, causes and significance. Chromosome replication and cell
separation (on aspect of cell signaling).Physiology of cell: Energy, enzymes and metabolism, cellular respiration,
cell secretion.
Books Recommended:
1. Power, C. B., : Cell Biology.
2. Stern, H. and Nanney, D. L., : The Biology of Cells.
3. Verma, O. P. S. and Agarwal, O. V. K., : Cell Biology, Genetics and Molecular Biology.
4. Rastogi, S. C., : Cell Biology.
Introduction: definition, classification, nomenclature and scope of Biology. Systematic study and
economic importance of different families, origin of life. Plant anatomy: ultrastructure and chemical
nature of cell wall, meristems and meristematic tissue and tissue system, function and distribution of
different plant tissues. Secondary growth of stem and root. Embryology: study of sporogenesis and
gametogenesis, oogenesis and spermatogenesis. Fertilization and development of embryo. Economic
biology: economic importance of plants, apiculture, sericulture, lac culture and fisheries in Bangladesh.
Applied Biology: causes of plant disease, diagnosis, symptoms, importance and control. Concept of insect
pests and pesticides. Definition of bio-agents, predator, parasitoids and vector, disease transmitting insects.
Ecology: Definition, types and fields, importance, habitat, community and ecological factors; Ecosystem:
definition, structure and function, types, energy flow, food chain and webs, Population Ecology.
Evolution: Overview of major phylogenic and evolutionary trends among the simpler plants and animals.
Introduction: Basic concepts of biomolecules. Water: Properties and biological importance of water.
Stereoisomerism: Introduction, enantiomers, chiral centre, configuration, specification of configuration: R and S,
Diastereomers, Meso compound, conformational isomers. Carbohydrates: Definition, classification, physical and
chemical properties, structure and general reactions, mono, di and polysaccharides, amino sugars and other
important saccharides, sources and biological functions of major carbohydrates. Proteins: Definition, classification
based on shape, structure and biological function; sequence determination of protein, preliminary concept on
secondary, tertiary and quaternary structure of proteins; fibrous proteins: α and β keratins, Globular proteins:
Structure of myoglobin, oligomeric proteins and quaternary structure of haemoglobin, oxygen binding curve of
haemoglobin and myoglobin. Amino acids: Definition, structure, properties, optical activity and classification of
amino acids, ionization of amino acids in solutions, titration curve of amino acids, isoelectric properties, general
reactions of amino acids. Peptides of biological interest. Lipids: Definition, classification, chemical and physical
properties, fatty acid composition of fats. Chemical reactions of fatty acids. Edible oils and their characteristic fatty
acid composition. Characterization of fats, oils and waxes, phospholipids with special reference to lecithin and
cephalic. Nucleic acids: Definition, composition and classification, structure and physiochemical properties,
important functions of nucleic acids. Vitamins: Deinitation, clssification, structure and function. Enzymes:
Definition, classification, Physiochemical properties, basic concepts of co-enzymes and prosthetic groups, mode of
action of enzymes, factor affecting enzymatic reactions.
Books Recommended:
1.Lehninger, Albert L.. Nelson David L ., Cox, M ichael M.,: Principle of Biochemistry
2. Murray, R. K., Granner, D. K., Mayes P. A. Riwell, V. W.: Harpers Biochemistry
3. Strayer, Lubert,.: Biochemistry
4. Morrison, R, Thornton, Boyd, R, Neilson. : Organic Chemistry
Books Recommended:
1. Readings from Scientific American., Molecules of Life., W.H. Freeman and Company, New York.
2. Darn ell, J., Lodesh, H. and Baltimore, D. 1986. Molecular Cell Biology., W.H. Freeman and Company, New
York.
3. Stryer, L. 1988. Biochemistry, W.H. Freeman and Company, New York.
4. Alberts, B. Bray, D. Lewis, J., 1989. Molecular Biology of the Cell. Garland Publishing, Inc. New York.
5. Stryer, L. 1989. Molecular Design of Life. W.H. Freeman and Company, New York.
6. Voet & Voet, 1991. Biochemistry.
7. Lehninger, Nelson, Cox, 1990. Principles of Biochemistry.
General physiology: Introduction, definition, branches of physiology, glossary and terminology related to
physiology. Blood circulation and cardiovascular system: Definition and different composition of blood and
plasma proteins, their structure, functions, development and fate. Blood coagulation mechanism, blood groups,
lymphoid system. Structure and properties of cardiac muscle, generation and conduction of cardiac impulse. E.C.G,
events of cardiac cycle and cardiac outputs, factor affecting heart rate, haemodynamics, blood pressure and its
regulation, fetal circulation and maternal circulation. Respiratory system: Different parts of respiratory system,
functions and pulmonary circulation, mechanisms of respiration. O2 and CO2 transport in the body, regulation of
respiration- nervous and chemical.Urinary system: Structure and functions of kidney, renal circulation, urine
formation in mammals, birds, reptiles. Filtration, reabsorption of different components of tubular fluid, excretion,
concentration of urine, concept of plasma clearance, acidification of urine. Digestive system: Structure and
functions of digestive system, digestive enzymes, mechanisms of secretions of gastric juice, physiology of digestion
and absorption of food (carbohydrates, proteins and fats).Reproductive system: Male and female reproductive
system of human, mammals and birds, structure and functions of these organs, puberty, estrous and menstrual cycle,
physiology of pregnancy, fertility, control and sterility. Endocrine system: Endocrine and exocrine glands of male
and female, growth and sex hormones, structure, functions and mechanisms of regulation of hormones. Nervous
system: Classification of nervous system, structure and functions of neuron, synapse, neurotransmitter and
transmission of nerve impulse, control of sensory and motor function. Organization of nervous system, cerebral
cortex, brain stem, cerebellum and spinal cord.
Books Recommended:
1. Ganong, W. F., : Review of Medical Physiology.
2. Guyton, A. C. and Hall, J.E.,: Textbook of Medical Physiology
3. Gottschalk, Gerhard,. : Bacterial Metabolism.
4. Dataa, S. C., : Plant Physiology.
Fine structure of gene: Classical versus molecular concept of gene. Structure and chemistry of nucleotides,
nucleosides and nucleic acids. The Watson and Crick model of DNA structure. Different physico-chemical
properties of DNA (Tm value, cot values, hybridization kinetics, different combinations of DNA). Mutagenesis:
Definition, classification, molecular basis of mutation, kinds of mutagenic agents and their effects on organism,
mutation affecting human beings, detection of mutation in Drosophila by CIB, Muller-5, attached-X methods,
practical methods of mutation. Transposons: Terminology, Insertion sequence, detection of transposons in bacteria,
structure of transposons and its nature, mechanism and role of transposons. Replication of DNA: Mode of
replication, DNA polymerases, mechanism and control of DNA synthesis for prokaryotic and eukaryotic system.
Repair of DNA: Alternation of DNA molecules- biological indication of repair, repair mechanism of thymine
dimers, restriction and modification sites, the role of restriction enzymes in genetic engineering, excision and repair
of mutant sequence. Gene regulation and expression: One gene- one polypeptide concept, protein synthesis
transcription and translation, co-linearity of gene and polypeptide, genes and enzymes involved in the synthesis of
arginine, tryptophan and histidine, gene regulation, structure and function of protein. Transcription: Prokaryotic
and eukaryotic RNA polymerase, mechanism of transcription, reverse transcriptase, regulation of transcription-
operon models and RNA splicing. Translation: Genetic codes, specificity, redundancy and Wobble hypothesis with
experimental evidences, colomearity of gene and protein structure. Protein Synthesis: Ribosome structure, protein
synthesis – initiation, elongation and termination, control of translation of both prokaryote and eukaryotes.
`
Books Recommended:
1. Verma, P. S. and Agarwal, V. K., : Cell Biology, Genetics, Molecular Biology and Evolution
2. Adams, R. L. P.; Burden, R. H., Camphel, L. D. P.; Smiling, R. M. S. : The Biochemistry of the Nuclic Acids.
3. Brown, T.A. (1995). : Gene Cloning: An Introduction
4. Lewin, B. (1996) : Gene VI
5. Peter J. L. and Leegoog, C.R. (1993). : Plant Biochemistry & Molecular Biology
Introduction: Definition, brief history of microbial world discovery, germ theory of disease, place of microbes
found, major classification of living organism by different scientists, distinctive characteristics of major microbes
group scope of microbiology. Characteristics of microorganism, classification, nomenclature and identification:
Morphological characteristics, chemical characteristics, cultural characteristics, metabolic characteristics, antigenic
characteristics, genetic characteristics, pathogenecity, ecological characteristics, classification, nomenclature,
identification. Bacterial world: Morphology, size, shape, external and internal structure of bacteria, classification,
nutritional requirement for bacterial culture, types of bacteriological culture media, physical condition for growth,
reproduction, growth, maintenance and preservation of bacteria, importance and disadvantage of bacteria, bacterial
disease. The virus: Definition, classification, characteristics, bacterio- phages; morphology, structure and
component, replication, lytic cycle and lysogenic cycle, HIV, SARS, Dengue virus-their structure, characteristics
and pathogenecity. Fungi: Molds and yeasts distinguishing characteristics, cultivation, some fungi of special
interest, fungal disease and prevention. Algae: Characteristics, reproduction, biological and economical important
of some species, algae and disease. Control of microorganism: Fundamentals of control, the control of microbes by
physical, chemical and antimicrobial agents, characteristics of these agents, evaluation of antimicrobial chemical
agents.
Books Recommended:
1. Pelezar, M.J; Chan, E.C.S. and Kreig, N.R.(1993). : Microbiology. McGraw Hill Inc. USA.
2. Tortera, G.J.; Funke, B.R. and Case, C.I., (1982). : Microbiology: An Introduction.
3. Stainer. R.Y.; Adelberg and Ingraham, I.J. : General Microbiology, MacMillan USA.
4. Purohit, S. S. (2004): Microbiology; Fundamentals & Applications, India
Introduction: Definition, extent and brief history. The chromosome complement: Morphological structure,
nomenclature and characteristics of chromosome, chemical organization and ultra structure of chromosome, viral
chromosome. Euchromatin, Heterochromatin, karyotype and banding pattern of chromosome, cytogenetics of sex
determination and sex differentiation. Structural changes of chromosome: Deletion, duplication, inversion,
translocation; Definition, types, origin, meiotic behavior and role of evolution, uses in cytogenetical study.
Numerical changes of chromosome: Polyploidy, autopolyploidy, autotetraploids, allopolyploids, trisomic (primary,
secondary and tertiary), monosomic and nullisomic and haploid. Molecular cytogenetics: Nuclear DNA content and
its organization, Genetic, cytogenetic and physical maps using molecular markers.
Books Recommended:
1. Gupta, P. K., : Cytogenetics.
2. Sinha, U. and Sinha, S., : Cytogenetics, Plant Breeding and Evolution.
3. Verma, P. S. and Agarwal, V. K., : Cell biology, Genetics, Molecular biology, Evolution and Ecology.
4. Shukla and Chandel, : Cytogenetics and Evolution.
Introduction: Definition, classification, factors affecting enzyme activity, active site, activation energy, equilibrium
constant, binding energy, interaction between enzyme and substrate, general acid-base catalysis, covalent catalysis,
metal ion catalysis. Enzyme kinetics: Michaelis-Menten equation, Line Weaver-Burk equation. Enzyme inhibition:
Reversible and irreversible inhibition; competative, noncompetative and uncompetative inhibition. Regulatory
Enzymes: Allosteric Enzymes, kinetic behavior of allosteric enzyme, mechanism of regulatory activity of allosteric
enzyme, covalent modification of enzymes isozyme. Enzyme immobilization .Microbial screening, selection and
strain improvement: Sources of industrial used microorganism, techniques of microbial screening, methods of strain
improvement. Enzyme isolation, purification and assay: Objective and stratigies in enzyme purification,clarification
of soluble enzyme, methods of concentrating enzymes, various curomatographic method for enzyme purification,
examples of purification procedure, techniques of enzyme assay, determination of molecular wt and amino acid
compsition. Industrial production of Enzymes: Enzymes isolated on industrial scale and their application.
Bioenergetics and metabolism: Bioenergetics and thermodynamics, high energy compound, the ATP cycle,
occurrences and properties of ATP, ADP and AMP, AP, transfer of phosphate group, ATP as the source of energy,
role of AMP and pyrophosphate, other high energy compounds. Mitochondria: Structure, enzyme localization ,
mitochondrial electron flow, electron carriers. Biological Oxidation and Reduction Reactions: Oxidative
phosphorylation and dephosphorylation: ATP Synthesis: Coupling with respiratory electron flow, the chemiosmotic
model, mitochondrial oxidation of cytosolic NADH, energetic of electron transport, uncoupling and inhibition of
electron transport, regulation of oxidative phosphorylation.
Books Recommended:
1. Wiseman, A. : Principles of Biotechnology.
2. Nicholas C. Price and Lewis Stevens. : Fundamental of Enzymology
3. Watson, J.D. Gilman, M, Witkowskli, J., Zoller, M. : Recombinant DNA Technology
Books recommendation:
1. Steel, R.D.G and Torry, J.H (1960). : Principles and procedures of statistics. McGraw Hill Book Co. Inc. NewYork
2. Mian, M.& Miyan, Alimullah, M. (1984). : Introduction to Statistics.
3. Cochraan . W.G & Cox. G. M., : Experimental Designs.
4. Shill & R Debnath; Introduction to Statistics
5. Mostafa M. N., Method of statistic, Bangladesh
6. Islam M.N Introduction to statistic and probability, 3rd edition.
General aspects of metabolism: Experimental approaches to the study of metabolism, a survey of intermediary
metabolism. Glycolysis: The glycolytic pathway, metabolism of disaccharides, pentoses and hexoses, physiological
importance of anaerobic glycolysis, fructose intolerance, The tricarboxylic acid cycle: Cycle overview, the
discovery of the TCA cycle, amphibolic nature of the cycle, anaplerotic reactions, pyruvate dehydrogenase
deficiency. Other pathways of carbohydrate degradation: The pentose phosphate pathway, the glyoxylate pathway.
Biosynthesis of carbohydrate: Gluconeogenesis, biosynthesis of di-, oligo-, and polysaccharides, glycoproteins
and nucleotide sugar formation. Fatty acid metabolism: Fatty acid oxidation, utilization of fatty acids for energy
production, ketone body formation and utilization.Lipid metabolism: lipid biosynthesis, fatty acid biosynthesis,
storage of fatty acids as triglycerides, , cholesterol metabolism, Disorders of lipid metabolism. Amino acid
metabolism: general reactions of amino acids, oxidative degradation of amino acids, amino acid biosynthesis,
nitrogen fixation, clinical correlations: phenylketonuria, alkaptonuria, folic acid deficiency, hyperammonemia and
hepatic coma, deficiencies of the urea cycle enzymes. Nucleotide metabolism : synthesis of purine and pyrimidine
nucleotides, formation of deoxyribonucleotides, nucleotide degradation, antimetabolites of purine and pyrimidine
nucleotide metabolism. heme metabolism. Xenobiotics : Introduction, general properties, role of liver in such
metabolism, characteristics of cytochrome P450, methods of xenobiotic metabolism. Regulation of enzyme
activity: Enzyme availability, alteration of catalytic efficiency. Hormones: General introduction, classification and
chemistry, feed back control, second messenger, role Camp, ca2+ as 2nd messengers, phosphotidyl inositol,
mechanism of action of Epinephrine, Glucagons, Insulin and steroid hormone. Metabolic Integration: regulation of
metabolism in liver, muscle and adipose tissues.
Books Recommended:
1.Lehninger, Albert L.. Nelson David L ., Cox, M ichael M.,: Principle of Biochemistry
2. Murray, R. K., Granner, D. K., Mayes P. A. Riwell, V. W.: Harpers Biochemistry
3. Strayer, Lubert,.: Biochemistry
Books Recommended:
1. Smith, J.E. : Biotechnology
2. Bubey, R.C. : Introduction to Biotechnology
3. Bilgrami and Pandey. : Introduction to Biotechnology
Introduction: Importance, scope and application of plant physiology. Mineral nutrition: The chemical composition
of plant, classification of plant nutrients, deficiency symptoms, macro and micronutrients.
Hydroponics and its significance. Plant cell specialties, chloroplast: Detailed structure.
Photosynthesis: Photosynthetic apparatus and pigment system, transformation of light energy into
chemical energy, factors affecting photosynthesis, C3, C4 and CAM pathways, significance of
photosynthesis, source and sink relationship. Respiration: respiratory substrates, glycolysis, kreb
cycle and electron transport system, hexos-monophosphate pathway, photorespiration and its
significance. Plant growth regulators: physiological and biochemical role, use of phytohormone in
agriculture and plant tissue culture. Physiology of flowering: Mechanism of flowering, florigen,
light image, photoperiodism and vernalization. Growth and development: factors, kinds, shoot
growth, life processes of plants, leaf area index, and growth rate. Light and plant life --- Light
sensing by plants; Photomorphogenesis; Phytochromoe and blue light photoreceptors; Effect of UV
light on biological systems; Significance of biological clocks. Dormancy and germination of seeds:
definition, germination and seed viability, types and causes, process of germination, causes of
losses of seed viability. Secondary metabolites: Types, Alkaloids and plant phenolics, commercial
application, production via plant cell culture.
Books Recommended:
1. Galstone, A.W. and Davies, P.J. 1970. Control Mechanism in Plant Development., Prentice Hall Inc, Englewood
Cliffs, New Jersey.
2. Galstone, A.W. and Davies, P.J. 1980. A Life of a Green Plant., Prentice Hall Inc, Englewood Cliffs, New Jersey.
3. Noggle, G.R. and Fritz, G.J. 1983., Introductory Plant Physiology., Prentice Hall Inc, Englewood Cliffs, New
Jersey.
4. Salisbury, F.B. and Ross, C.W. 1983., Plant Physiology., Wardsworth Pub. Co. USA.
5. Devlin, R.M. 1988., Plant Physiology., Reinhold Pub. Co. New York.
Books Recommended:
1. Hafez, E.S.E. : 1993. Reproduction in farm animals. (6th edn) Lea & Febiger, Philadelphia.
2. Lamming , G.E. : Marshall’s Physiology of Reproduction. 1990 (4th edn) Churchill Livingstone, London.
3. Austin C.R and Short, R.V. : Reproduction in mammals: Book 1, Germ cells and fertilization.
4. Austin C.R and Short, R.V. : Reproduction in mammals: Book 2. Embryonic an
5. R.K. Ghosh. Primary veterinary anatomy; Current books international, kolkata, 4th edition (2006)
6. Getty, R. : Sisson and Grossman’s The anatomy of the Domestic animals, 5th edition, W.B. Saunders and Co.
Philadelphia (USA)
Books Recommended:
1. Razdan, M.K. : An Introduction to Plant Tissue Culture.
2. Bhojwani, S.S. : Plant Tissue Culture
3. Vasil, I,K. and Thrope. Plant Cell and Tissue Culture.
Introduction: Concept, genetic principles, variable number of tandem repeats (VNTRs)/Minisattellite sequences,
short tandem repeats (STRs)/Microsattellite sequences, hybrid arrester translation, hybrid released translation. DNA
Fingerprinting: Hybridization based DNA fingerprinting (RFLP) - radioactive, fluorescent and chemiluminescent
methods; PCR-based DNA fingerprinting-Single locus and multi-locus DNA fingerprinting, RAPD, AFLP.
Application of PCR, RT-PCR, LCR, differential display, RNA fingerprinting. Polymorphisms: Polymorphism of
some genetic locus in relation to diseases. Applications of DNA Fingerprinting: Identification of
genotypes/varieties/breeds/strains; animal and plant protection right, criminal investigation, immigration, paternity
dispute, identification of missing children, bodies found in plane crush, road accidents etc. Marker assisted
selection: By RAPD, SSR. Gene manipulation: Definition of cloning, types, history, Procedure of cloning: Animal,
plant and microbes. Gene mapping: The human genome project, present status, strategies, potential benefits.
genomic library building, DNA cloning, screening. Cloning for expression, commercial and medical applications
Drawback of cloning: Ethical concerns connected with human gene cloning.
Books Recommended:
1. Fowler, EA. 1993. Techniques for Engineering Genes. Butterworth-Heinemann Ltd., UK.
2. Gupta, P.K. 1997. Cell and Molecular Biology. Rastogi Pub., India.
3. Henry, R.J. 1984. Practical Applications of Plant Molecular Biology. Chapman and Hall Pub., London.
4. Micklos, D.A. and G.A. Freyer. 1990. DNA Science, Cold Spring Harbor Lab Press, New York.
5. Stansfield, W.D. 1996. Theory and Problems of Molecular and Cell Biology. McGraw Hill Co., New York.
6. Weising, K., H. Nybom, K. Woff, and W. Meyer. 1995. DNA Fingerprinting in Plants and Fungi. CRC Press,
USA.
Introduction to immunology and immune system: Innate and adaptive immunity, molecular and cellular basis of
immune system, soluble mediators of immunity, cytokines, antigen, haptens and carriers and inflammation. Cells
involved in immune response: Lymphocytes (T cells, B cells and NK cells), development maturation, activation,
recognition and accessory molecules and T & B cells, Natural killer cells. Antigen, Antibody and T cell receptor:
Antigen antibody reaction, structure and general properties of immunoglobulin, structure of T-cell receptor, theories
of antibody production, purification of antibody, immunoglobulin genes and diversity. Vaccination: Adminstration
of vaccines, antigen used as vaccines, effectiveness of vaccines, adjuvant, active and passive immunity.
Complements: Introduction, nomenclature, activities of complement, activation of complement, classical and
alternative pathways, biological effects of complement. Immunopathology: Hypersensitivity, autoimmunity and
autoimmune disease, Acquired Immune Deficiency Syndrome (AIDS). Immunological techniques:
Immunodiffusion, heamagglutination and complement fixation test, direct and indirect immunoflauroscence, Radio
immune Assay (RIA), enzyme linked immunosorbent assay (ELISA). Some examples of immunological procedures
used in bioassay. MHC molecules: Discovery and function, class, antigen processing and presentation, genomic
organization of MHC, MHC polymorphism. Gene therapy: Definition, history. Human gene therapy: Uses in
different disease recovery. Cancer gene therapy: Definition, causes, recovery through gene therapy.
Transplantation and rejection: Barriers of transplantation, histocompatibility antigens, laws of transplantation, role
of T lymphocytes in graft rejection.
Books Recommended:
1. Donald, M. W.,: Immunology.
2. Roitt, M., : Immunolgy.
Introduction: Relations among Mendelian genetics, quantitative genetics population genetics, its scope. Genetic
Constitution of a population: Gene frequency, genotype frequency, Hardy-Weinberg Equilibrium, changes of gene
frequency in migration, mutation, selection and small population, the idealized population and inbred population.
Variation, values and means: Phenotypic and genotypic values, average effect and breeding values, genetic
components of variance, Environmental variance and repeatability. Phenotypic and genetic resemblance between
relatives. Genetic and environmental covariance, Heritability and its estimation, genetic and environmental
correlation. Selection and Breeding: Response to selection and its prediction, long term selection effects, efficiency
in various methods of selection, inbred lines, heterosis, synthetic population, general and specific combining
abilities, scale effects, threshold characters, and fitness related to metric characters. Polygenic inheritance:
Continuous variation, polygene, major genes, genic basic and biometrical approach. Component of variation:
Additive and dominance effects, non–allelic interactions in polygenic system; Heritability and genetic advance,
components, of variation. Estimation of Genetic parameters: Calculation of genetic parameters and non- genetic
components of phenotypic variance of genetically engineered plants in single location. Genotype–environment
Interaction: Genotype–environment interaction in segregating and non–segregating generations. Heritability and
selection: Estimation of heritability (broad and narrow sense), correlated characters, genetic and environmental
correlation, path-coefficient analysis and selection, selection response and its application. Gene frequencies and
equilibrium: Gene frequencies, gene pool, conservation of gene frequencies stain of equilibrium of two or more
loci. Co dominance of natural population. Sex linkage in natural population and multiple alleles. Migration and
population structure: Estimation of migration and population structures. Direct observation of migration. The
continent of Island Model. Genetic drift: Effect of genetic drift, effective population size.
Books Recommended:
1. Mather, K. and Jinks, J. L., : Biometrical Genetics(The study of continuous variation) Third Ed.
2. Strickberger, M. W., : Genetics
3. Falconer, D. S., : Introduction to Quantitative Genetics. Second Ed.
4. Mather, K. and Jinks, J. L., : Introduction to Biometrical Genetics.
5. Falconer, D.S. 1989 (3rd edn),: Introduction to Quantitative Genetics. Longman, London.
6. Chapman, A.B. : General and Quantitative Genetics. World Animal Science, A4 Elsevier Scientific publications,
B.V. Amsterdam 1985.
7. Hedrick, P. W., : Genetics of population.
Books Recommended:
1. Watson. : Recombinant DNA Technology.
2. Foster, G.D. and Twell, D. : Plant Gene Isolation: Principles and Practice.
3. Barbuik. L.A.; Philliips, J.P and M. Moo-Young. : Animal Biotechnology: Comprehensive Biotechnology
Introduction to animal tissue culture: Definition, type and history & development, Importance of cell, tissue and
organ culture. Background of Animal Cell culture: Animal cell cultures new understanding, new developments.
Animal cell culture technology in the 21st century. Laboratory Organization: Facilities, design, operation and
management. Media: Components, composition, functions of components, preparation and media selection.
Solidification and maintenance of media. Equipping the laboratory: Essential, beneficial and useful additional
equipmentsconsumable items. Contamination, laboratory safety and biohazards: Types of microbial contamination,
detection of microbial contamination, cross contamination, general safety, fire, radiation and biohazards.
Preparation and sterilization: Principles of sterilization of apparatus, reagents and media. The cell culture
environment: Substrate, gas phase, medium and temperature. The substrate: plastic and glass wares; tissue culture
flasks, culture vessels. The gas phase: Oxygen, carbondioxide, Medium and Supplements: physical properties,
constituents of media, serum, serum-free media; selection of medium and serum, other supplements, incubation
temperature. Isolation of tissue and primary culture: Mouse embryos and hen’s egg.Culture of specific cell types:
epithelial cells, mesenchymal cells, neuroectodermal cells, hemopoietic cells. Culture of tumor tissue- general
method, selective culture. Three- Dimensional culture system: Organ culture, histotypic culture, filter wells.
Preparation of cell line: Isolation of different types of animal tissue; fibroblast, liver, kidney, bone marrow and
their uses, Physical methods of cell separation. Maintenance of cultured cells: Routine observation and
maintenance; cloning and selection of specific cell-types. Quantitation and experimental design: selection of cell
line; experimental design; growth phase: cell counting, preparation of samples for enzyme assay and immune assay,
preparation of samples for extraction of DNA and RNA.
Books Recommended:
1. Befuery, Griffiths and Zeijlemaker : Animal Cell Technology
2. Ian Fresshney, R. : Culture of Animal Cells
3. Chirkjian, J. G. : Biotechnology : Theory and Techniques
Books Recommended:
1. Singh, B. D., : A Text Book of Plant Breeding.
2. Allard, R. W., : Principles of Plant Breeding.
3. Simmonds, N. W., : Principles of Crop improvement.
4. Chopra, V. L., : Plant Breeding theory and Practice.
Introduction: Definition, history, biotechnology used in industry and pharmaceuticals. Concept of Good
Manufacturing Practice (GMP): Practice of GMP, Quality Control, Quality Assurance and In-process control in
Pharmaceutical and Industry. Effect of microorganism in Pharmaceuticals: Affects of microorganism in
pharmaceuticals and industries environment, water, skin, respiratory tract flora, raw materials, plant sanitation,
building and equipment. Production of pharmaceutical products: Production of polyclonal and monoclonal
antibiotics, antibodies, vaccine and immunosera, cell culture and hybridoma technology. Modern pharmaceutical
products by recombinant DNA technology: Interferon, insulin, somatostain, human growth hormone, etc. Test and
techniques used for good pharmaceutical product: Sterility testing, purification of pharmaceutical products,
potency of antibiotics and microbial quality control. Disease and diagnosis: Infectious and genetic disease,
diagnosis of diseases by conventional and DNA based probes, gene therapy and counseling.
Books Recommended:
1. Huge, W.B. and Russel, A.D.Edited : Pharmaceutical Microbiology,
2. Board, R.G. Allowodd, M.C. Bank, J.G. (Edited) : Preservatives in the pharmaceutical, food & environment
industries. Blackwell Scientific Publication.
Books Recommended:
1. Kothari, C.R., : Methods and Techniques.
2. Sing, A.K., : Measurements and Research Methods In Behavioral Sciences.
Introduction: Need for animal products, concept of animal genetics, application of genetics in livestock and other
economical animals. Mendelian genetics: Principles of inheritance- the law of segregation and the law of
independent assortment, modification of Mendelian ratios – lack of dominance, lethal genes, epistasis, linkage and
crossing over. Sex determination and sex linkage: Mechanism of sex determination, free martin, intersexes and
super sexes, sex linked, sex influenced and sex limited characters. Chromosomal aberration: Deletion and
duplication. Aneuploidy and polyploidy in animals, chromosomal abnormality syndromes in animals. Karyotype
and Genetic maps: linear arrangement of gene in chromosome, linkage maps of Drosophila chromosomes, maps of
human chromosome, Giant chromosomes in the salivary glands of flies. Concept of animal breeding. Its
development and application, domestication of farm animals, development of breed association. Population, breeds
and breed structure,. Phenotypic variation: Values and means, discrete and continuous variation, normal
distribution, components of phenotypic and genetic variation, genotype-environment interaction, average effect of
genes. Population parameters: Heritability, repeatability and genetic correlation- definition, methods of estimation
and their uses. Breeding value: Definition, estimation and uses, most probable producing ability (MPPA),
transmitting ability, best linear unbiased prediction (BLUP), Quantitative trait loci (QTL). Selection: Natural and
artificial selection, selection objectives and selection criteria, mass selection, pedigree selection, family selection,
progeny testing, sib testing, methods of selection for more than one traits. Selection for correlated traits. Single gene
effect in animal breeding, Nucleus breeding system, accuracy of selection. Response to selection: Selection
program for livestock improvement, prediction and estimation of selection response, selection limit. Mating
System: Inbreeding, inbreeding depression, crossbreeding and Heterosis, selection for combining ability, formation
of synthetic breeds, grading-up and species hybridization, breed conservation. Breeding plan formulation:
Improvement goal, existing genetic resources, improvement policy, breeding policy formulation for livestock,
rabbit and zoo animals.
Books Recommended:
1. Warwick, E.J. and Legates. 1987. : Breeding and Improvement of farm animal (7th ed.) McGraw Hill Book Co.
Inc., New York.
2. Lasely, J.F. 1978. : Genetics of Livestock Improvement (3rd edn.) Prentice Hall of India, New Delhi.
3. Malcolm B. Willis. 1991. : Dalton’s Introduction to practical animal breeding (3rd edn) Blackwell Sci. London.
4. Verma, P.S. and V.K Agarwal 1985. : Genetics (6th edn) S. Chand and Co. Ltd. New Delhi.
5. Gardner, E.J ., M.J. Simmons and D.P. Snustad. 1991. : Genetics (18th edn) John Wiley and Sons. New York.
6. Strickberger, M.W. 1968. : Genetics. McMillan, New York.
Introduction to Bioinformatics: the fundamentals of protein and nucleic acid Sequence analysis, Database
searching, pairwise alignments, database searching including BLAST, Sequence analysis with PERL, Multiple
sequence alignments, phylogenetic analysis, Profile searches of databases, revealing protein motifs, 3D structural
comparisons, predictions and modeling. Genomics: Genetics to genomics, genomes sequencing strategies. Genome
Sequence Acquisition and Analysis, Evolution and Genomes, Biomedical Genome Research: genomic sequences to
make new vaccines, new types of antibiotics, new types of medications. Variation in the human genome, known
examples of SNPs that cause diseases, Pharmacogenomics, Ethical Consequences of Genomic Variations.
Expression Data Analysis: DNA/RNA Microarrays, The oligo microarray/chip technology, Affymetrix protocol
and data generation, The spotted microarray technology, cDNA and oligo spotted arrays, Biomedical applications;
Cancer and genomic microarrays. Nanotechnology, Gene therapy. Proteomics: Introduction, Protein 3D Structures,
Protein identifications (2-hybrid system, 2-D gel electrophoresis, mass spectrometry/MALDI-TOF, other arrays).
Statistical models and stochastic processes in Proteomics, Signal Processing for Proteomics, Protein Interaction
Networks, measureing protein interactions, Large-scale databases of information for protein sequences, structures,
functions and interactions; mining of protein databases, applications to human disease studies. Networks in
Bioinformatics/Proteomics: Communication Networks, Biological networks (Protein Interaction Networks, Gene
regulation networks, Metabolism, Biochemical reactions), Databases and search tools for biological network
analysis. Genomic Circuits: in Single Genes, Complex integrated Genomic Circuits, Modeling Whole-Genome
Circuits: Genomics vs. Proteomics Case study Yeast Protein Interaction Network (random network, Scale free
network, Hierarchical network)
Books Recommended:
1. Discovering Genomics, Proteomics, & Bioinformatics. Campbell & Heyer (2003) Pearson Education, ISBN: 0-
8053-4722-4
2. Bioinformatics, Methods of Biochemical Analysis Series Vol. 43, Baxevanis & Ouellette (2001) John Wiley &
Sons, ISBN 0-471-38391-0
3. Computational Molecular Biology. Pevzner, P.A. (2000) MIT Press, ISBN: 0262161974
4. Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins. Andreas D. Baxevanis & B. F. Francis
5. Ouellette (2004). 3rd Edition. Wiley & Sons, ISBN: 0-471-47878-4
Chromosome structure: Basic chemical aspects – DNA, histones and non-histones; Basic structural aspects – the
nucleosomes, chromosome packaging. Organization of the genome in Eukaryotes: Gene and gene number; C-value
paradox; Organization of replication; Gene amplification, Chromosomal redundency, Repetitive DNA and its
relevance to plants and animals, inverted and tandem repeats. Gene Expression: Operon concept, lytic cascade and
lysogenic repression, DNA methylation, etc. chromosomal activation, regulation of gene expression in eukaryotes,
cell differentiation and oncogenes. Regulation of gene expression: Transcription – multiple RNA polymerases,
sigma like factors in eukaryotes; Heterogeneous nuclear RNA; Messenger RNA -- structure and complexity;
Interrupted genes and RNA splicing; Expression of specific genes; Genes for ribosomal RNA; Histone genes;
Globin genes; Heat-shock genes; possible role of middle repetitive DNA in control of gene expression. Regulation
of gene expression in prokaryotes; Lac and Trp operon, inducible and repressible systems; positive and negative
control; Brief introduction to the complexity of eukaryotic genetics. genetic recombination: Homologous and non
homologous, In vitro mutagenesis, site-directed mutagenesis; gene targeting, transposon mutagenesis. Repair
mechanism in mutation. Molecular biology of organelles: Extra nuclear hereditary materials; Genomes of
mitochondria and plastid -- interaction with nucleus; Rubisco -- a case study of duel control of its synthesis by
nucleus as well as plastome. In vivo Expression Techniques: Subtraction hybridization, transposon tagging,
promoter trapping, activation tagging.
Books Recommended:
1. Adams, R.L.P., J.T. Knowler and D.P. Leader. 1992. The Biochemistry of Nucleic Acids, 11th Ed. Champman &
Hall, New York.
2. Alberts, B., D. Bray, J. Lewis, M. Rolf, K. Roberts, and J. D. Watson. 1994. Molecular Biology of the Cell. (3rd
ed). Garland Publishing Inc, New York.
3. Darnal. J., H. Lodish and D. Baltimoye. 1990. Molecular Cell Biology, 2nd Ed. Scientific American Books. New
York.
4. Freifelder, D. 1987. Molecular Biology. 2nd ed. Jones Bartlett Pub Inc, Boston.
5. Lehninger, A.L., D. L. Nelson and M.M. Cox. 1993. Principles of Biochemistry, 2nd Ed. Worth Pub., New York.
6. Reynolds, P.H.S. 1999. Inducible Gene Expression in Plant. CABI Publication, New York.
Centrifugation techniques: Theory and application of analytical and preparative centrifugation, concept of
continuous and zonal rotors, use of K and K factors, analytical ultracentrifuge. Isolation of plasmid DNA, genomic
DNA, RNAs and Protein. Quantification of nucleic acids by UV absorbance spectophotometry . Electrophoretic
Techniques: Theory, applications and types of starch, agarose and polyacrylamide gel electrophoresis; paper, native
and SDS-PAGE electrophoreses; iso-electric focussing, isotechophoresis, immuno-diffusion and immuno-
electrophoresis methods. Molecular Techniques: PCR, Southern, Northern and Western blotting, bioassay tests,
sequencing. Chromatography Techniques: Theory, applications and types of chromatography- paper, thin layer
(TLC), gel filtration, ion-exchange, affinity, reverse-phase chromatography, GLC, HPLC and FPLC. Radioisotopic
Techniques: Introduction to radioisotopes, their uses and monitoring concept of counting efficiency, and
autoradiography, radiation dosimetry. Labelling and measurements of radioactivity. Calculation of g-value.
Spectroscopic Techniques: Theory and applications of UV and visible spectrophotometry, fluorimetry, MS, NMR,
PMR, ESR, plasma emission, spectroscopy, hydrodynamic methods, X-ray diffraction, atomic absorption.
Purification and characterization: Enzymes, protein, crystallization. Identification of bacterial species: sequences
of their 16S ribosomal RNA genes.
Books Recommended:
1. Cowell, I.G. and C.A. Austin. 1997. cDNA Library Protocols. Humana Press, New Jersey.
2. Fowler, EA. 1993. Techniques for Engineering Genes. Butterworth-Heinemann Ltd., UK.
3. Freefelder, D. 1985. Essentials of Molecular Biology. Narosa Publishing House. New Delhi.
4. Freifelder. D. 1982. Physical Biochemistry. Application to Biochemistry and Molecular Biology, 2nd Ed. W.H.
Freemen and Company, San Fransisco.
5. Glover, D.M., and B.D. Hames. 1995. DNA Cloning-1 Core Techniques: A Practical Approach. Oxford
University Press, New York.
6. Gupta, P.K. 1997. Cell and Molecular Biology. Rastogi Pub., India.
7. Kjellssion, G., V. Simonsen, and K. Ammann. 1997. Methods for Risk Assessment of Transgenic Plants.
Birkhauser Verlag, Germany.
8. Slater, R.J. 1990. Radioisotopes in Biology- A Practical Approach. Oxford University Press, UK.
Books recommended:
1. Molecular Biotechnology. Glick, B.R. and Pasternak, J.J. 2003. ASM Press, USA.
2. DNA cloning 1 and 2. Glover, D.M. and Hames, B.D. 1995. IRL Press (Oxford University Press, USA).
5. Molecular Biology of the Cell (4th edition). Alberts, Johnson, Lewis, Raff, Roberts and Walter.
6. Molecular Cell Biology (5th edition). Lodish, Berk, Matsudaira, Kaiser, Krieger, Scott, Zipersky and Darnell.
7. Lehninger Principles of Biochemistry (4th edition). Nelson and Cox.
8. Molecular Biology of the Gene. Watson, Baker, Bell.
Books Recommended:
1. Niyogi, A. K. and Srivastava, H. C., Human Genetics.
2. Singer. Human Genetics.
3. Mange. Human Genetics Basic.
4. Mandal, I. S. Fundamental of Human Genetics.
5. Dhar, P. K., Human Genetics.
GEN 435 RECOMBINANT DNA TECHNOLOGY
3 Hours/week 3 Credits
Enzymes: Restriction enzyme, DNA polymerase, ligase, kinase, phosphatase, reverse transcriptase, exonuclease,
ribonuclease, Proteinase. Cloning Vectors: Plasmid, cosmid, phage, phagemid, transponson etc. Gene Cloning:
Isolation of mRNA and construction of cDNA library and genomic library, Screening of gene libraries by PCR,
DNA hybridization, colony hybridization, Southern blotting, Northern blotting, immunoscreening assay and
protein activity. Labelling of Nucleic Acids: Radioactive and non-radioactive labelling techniques, nick translation,
end labelling, primer extension. Prokaryotic Transformation: Transferring DNA into E. coli, chemical induction
and electroporation. Marker Genes: Selectable, screenable and nonantibiotic markers. DNA Delivery: Direct and
indirect methods; through physical, chemical and biological processes. Gene Expression in Prokaryotes: Tissue
specific promoter wound inducible promoters, strong and regulatable promoters; increasing protein production;
fusion proteins; translation expression vectors; DNA integration into bacterial genome; increasing secretions.
Protein/enzyme purification, characterization and crystallization. Recombinant protein production in yeast:
Saccharomyces cerevisiae expression systems; S. cerevisiae vectors
Books Recommended:
1. Brown, T.A. 1998. Recombinant DNA. Academic Press, London.
2. Cowell, I.G. and C.A. Austin. 1997. cDNA Library Protocols. Humana Press, New Jersey.
3. Cunningham, C. and A.J.R. Porter. Recombinant Proteins form Plants. Humana Press, New Jersey.
4. Draper, J., R. Scott and P. Armttage. 1988. Plant Genetic Transformation and Gene Expression. Black Well
Scientific Pub., London.
5. Glick, B.R. and J.J. Pasternak. 1988. Molecular Biotechnology, ASM Press, USA
6. Glover, D.M. and B.D. Hames. 1995. DNA Cloning 1 and 2, IRL Press, USA.
7. Old, R W and S.B. Primrose. 1989. Principles of Gene Manipulation. Blackwell Sci Pub.
8. Sambrook, J., E.F. Fritsch and T. Maniatis. 1999. Molecular Cloning. Cold Spring Harbor Press.
GMO: Definition, common mechanism of GMO, Production of transgenic plant, animal and microbes, merits and
demerits of using GMO, Present research on GMO. Risk for animal or human health - toxicity and food
quality/safety, allergies, pathogen drug resistance (antibiotic resistance). Risk for agriculture - weeds or
superweeds, alteration of nutritional value (attractiveness of the organism to the pests), reduction of cultivars
(increase of susceptibility) and loss of biodiversity. Risk for the environment - Persistancy of gene or transgene or
transgene products, resistance/tolerance of target organism or susceptibility of non-target organisms, increased use
of chemicals in agriculture, unpredictable gene expression or transgene instability. GMO Debate: Ethics and issues
regarding genetically modified organisms. Religious and social acceptance of GMOs. Biosafety regulations:
protect nature, growers and consumers interest and national interest. Cartigena protocol.
Books recommended:
1. Modern Food Biotechnology, Human Health & Development: An Evidence Based Study. Food Safety
Department, World Health Organization. 2005
2. Genetic Engineering in Agriculture and the Environemnt: Assessing risk and benefits. Maurizio
G. Paoletti and David Pimentel. http:\\www.ag.auburn.edu/biotech/genetic.html.
3. The Ecological Risks of Engineered Crops. Rissler, J. and Mellon, M., 1996. Cambridge, USA:
The MIT Press.
Environmental Biology and Man: The Future of Biosphere: (a) Global Climate Changes: Changes in atmosphere,
Increase of CO2: The greenhouse effect; The rise of temperature; Ozone hole; Impact on living beings;
Commenting on El Nino and oscillations in world’s climate; Desertification as affected by climate changes (b)
Social Forestry and Agroforestry: Threatening issues in forest cover depletion; Desertification due to overgrazing;
the tragedy of Chernobyl; Challenges and approaches; (c) Environment and Organismal health: Pollution of air,
water and soil and their mitigation; Acid rain; Transfer of harmful compounds through ecosystems. The nuclear
winter: The biological consequences. Recalcitrant Molecules: Recalcitrant molecules in the environment.
Characterization of microbial activity and the biodegradation of recalcitrant substances including pesticides in soil.
Microbial interactions with xenobiotics and inorganic pollutants. Persistence and biomagnification of xenobiotic
molecules. Biodeterioration of materials and their control. Soil and Water: Bioremediation of contaminated soil
and water bodies. Water treatment system and measurement of treatment efficiency. Recent advances in culturable
and non-culturable approaches for the detection of pathogens in potatble water. Effluent treatment plant. Some
Approaches: Application of biosensors for the detection of environmental pollutants, isolation and enrichment of
microorganisms capable of detoxifying environmental pollutants, waste management, environmental and
biotechnological approaches, and Biogas production. Biology and Future of Man: New application of biological
sciences towards human welfare. Human population growth. When we began sidesteping ? Control of human
fertility; Ethical considerations; Possible means of birth control, Invitro fertilization, Eugenics, Guarding the genetic
quality of man. Future of Homo sapiens
Books recommended:
1. Handler, P. 1970, Biology and the Future of Man., Oxford University Press. U.K.
2. Watson, J.D. and Tooze, J. 1981. DNA Story. W.H. Freeman and Comapany N.Y.
3. Ricklef, R.E. 1990. Ecology . W.H. Freeman and Comapany N.Y.
4. Freefelder, D. 1985. Essentials of Molecular Biology. Narosa Publishing House. New Delhi.
5. Kjellssion, G., V. Simonsen, and K. Ammann. 1997. Methods for Risk Assessment of Transgenic Plants.
Birkhauser Verlag, Germany.
6. Purohit, S.S, and S.K. Mathur. 1996. Biotechnology. Agro’s Botanical Publishers, India.
7. Modern Food Biotechnology, Human Health & Development: An Evidence Based Study. Food Safety
Department, World Health Organization. 2005