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Robert Arp
Ontology Research Group, New York State Center of Excellence in Bioinformatics & Life Sciences
Buffalo, New York 14203 USA
e-mail: rarp@buffalo.edu
keywords
tension, freedom, free will, intention, ecology, optimality, ethics, moral
philosophy, scientism, naturalism
abstract
There is a tension between science and philosophy, but this tension need not engender enmity or
derision. Scientists and philosophers can work together, and we argue that working together is
beneficial to both, even if it is sometimes uncomfortable. We offer examples of how philosophy can
autonomously and effectively inform scientific practice. Science and philosophy share certain method-
ological concerns and practices; therefore, scientists who disregard philosophy are vulnerable to critical
conceptual mistakes. If our arguments are correct, and if it can also be shown that science informs
philosophy, then, while it is possible for both disciplines to operate autonomously, each should welcome
the checks and balances that each provides for one another in the investigation and explanation of
reality.
17
18 THE QUARTERLY REVIEW OF BIOLOGY Volume 83
Ptolemaic systems. Also, purely natural ex- typical scientific problems are amenable to
planations at work in the universe, rather empirical scrutiny, many philosophical
than natural and supernatural explana- problems are not— e.g., the nature of at-
tions— e.g., through a designer God and tribute agreement, realism versus antireal-
creation ex nihilo—account for why many ism, freedom versus coercion. To address
philosophers choose naturalistic models of these less empirical concerns, both disci-
cosmological and biological evolution. plines employ thought experiments by way
A second point of methodological agree- of counter-example in order to analyze
ment shared by philosophers and scientists theoretical concepts. Anglo-American phi-
is the posture of rational investigation. Sci- losophers are continuously improving on
entists do not divorce themselves from rea- the precision of this procedure, and these
soning strategies and decision procedures improvements are utilized by mathemati-
in evaluating data. It is true that certain cians and scientists for especially hairy con-
developments fly in the face of common- ceptual obstacles. Although this method
sense assumptions (such as the twin- has been roundly criticized, at least since
paradox of special relativity), yet these con- Quine (1969), thought experiments con-
clusions are reached primarily on the basis tinue to play a significant role in guid-
of careful reasoning guided by experimen- ing fruitful philosophical and scientific
tation. Likewise, philosophers proceed on projects.
the basis of careful reasoning guided by
thought experiment and whatever empiri- Philosophical Pitfalls for Scientists
cal data proves relevant. Timothy William-
It is critical to be clear about the dialec-
son (2007) puts it nicely: “The metaphysi-
tic of our argument. We do not propose to
cians who most disdain language are the
show merely that there are philosophical
most likely to be its victims. . . . [T]hose
questions about the nature and develop-
who neglect logic in order to deduce phil-
ment of science over and above the prob-
osophical results from natural science
lems faced by working scientists. Surely we
make frequent logical errors in their de-
could all acknowledge that philosophers
ductions” (p 55).
will continue to wrestle with fascinating
Third, philosophers and scientists take
questions about, for example, scientific
an attitude of healthy skepticism toward in-
revolutions, reductionism, and realism.
vestigation. Skepticism refers to the atti-
Rather, our concern is whether there are
tude of doubt that accompanies ideas and
any philosophical questions with which sci-
findings, empirical or nonempirical. In
entists should be concerned. To demonstrate
contrast with radical skepticism, which
this, it would not behoove philosophers to
holds that all knowledge claims are sus-
offer arguments concerning the limita-
pect, healthy skepticism merely qualifies
tions of science, the open-endedness of sci-
that no knowledge claim is sacrosanct and entific ontology, or the epistemic snafus of
welcomes contrary data, even if it means empiricism. Scientists are typically not con-
the end of a pet theory. Both philosophy cerned with classical philosophical topics.
and science have built-in methods of criti- Therefore, to apprise scientists of their
cism that, when respected, encourage philosophical needs, we must provide con-
progress. Scholars in both fields of study crete examples of how the work of philos-
attempt to avoid personal presuppositions, ophy has clarified, concentrated, and ad-
unwarranted assumptions, inconclusive ev- vanced scientific projects. To this end we
idence, irrelevant variables, and hasty gen- offer four cases.
eralizations. In short, healthy skepticism
helps avoid theoretical extremes, profes-
sional arrogance, and faulty reasoning. 1. Conceptual Disregard
A fourth point of methodological agree- In the field of experimental psychology,
ment shared by philosophers and scientists Benjamin Libet (1983) has received much
is the concern for experimentation. Whereas attention for his work on the neural origin
20 THE QUARTERLY REVIEW OF BIOLOGY Volume 83
of action and its implications for free will. ably calls this spike in RPs our “intention,”
However, Libet has been accused of ignor- “decision,” “wanting,” “wish,” and “urge” to
ing some relevant philosophical distinc- act. The implication he draws from this
tions. His experiments involve charting analysis is that we are free to act, but in a
electrical charges at the vertex of the scalp very limited sense. We do not choose which
in relation to “self-paced” voluntary ac- actions to perform; we merely veto actions
tions. In the crucial experiment, sensors already begun by our brains. Some psy-
are attached to subjects’ scalps, and they chologists have claimed that Libet’s studies
are asked to watch a modified clock, where are some of the most direct challenges to
a spot of light emitted from a cathode ray traditional philosophical conceptions of
oscilloscope revolves around the face like a free will (Haggard et al. 1999).
second hand, but 25 times faster. The Although Libet’s experiments produce
speed of the spot makes each “second” some interesting results, there is a certain
mark on the clock equal to about 40 milli- disparity between these results and the
seconds. In these experiments, there are conclusions that he draws from them. Phi-
four test groups that can be roughly di- losopher Alfred Mele has, on several occa-
vided into those groups in which members sions (1997; 2003; 2006), criticized Libet’s
flick their right wrist or fingers voluntarily, analysis and interpretation of the concepts
either at a predetermined time or sponta- he employs in explaining his data. Mele
neously, and a group whose members are argues that Libet ignores the conceptual
told to prepare to flex at a particular time, distinction between “intending,” on the
but, prior to that time (say 100 –200 ms), one hand, and motivational states, such as
are instructed to “veto” or forego the flick- “wanting,” on the other (2006:44 – 45).
ing motion. It might be the case that if Mele’s con-
In all cases, the detected electrical ceptual challenges could be met, Libet’s
charges, which Libet calls “readiness po- experiments would still pose problems for
tentials” (RPs), undergo a ramplike pre- some views of free will. However, we think
event—that is, a significant increase— be- that Mele’s further scientific criticisms of
fore each voluntary action. These ramping the construction of Libet’s experiment, es-
charges begin about 550 ms prior to the pecially concerning the reliability of pa-
time when the subject could spontaneously tients to accurately record their clock-time
flick his or her wrist. In addition, the sub- in milliseconds, rule this out for the time
jects reported becoming aware of a desire being.
or urge to flick at about 200 ms prior to the Libet uses the terms “intention” and
action. Correcting for a 50 ms degree of “wanting” interchangeably. But Mele shows
error, this leaves about 400 ms prior to a that these concepts come apart rather
subject’s conscious awareness of the im- readily upon proper analysis:
pending act when the brain is uncon- Wanting to do something is distinguishable
sciously preparing the body for a voluntary from intending to do it. One can want . . .
motion. to A without being at all settled on A-ing.
Libet concludes from these experiments Yesterday, I wanted to meet a friend at a
that the initiation of voluntary actions is 7:00 movie and I wanted to join another
beyond our conscious control, and that the friend at a 7:00 lecture. I knew that I could
only role for the conscious will is to “select do either but not both. . . . To intend to do
and control” (Mele 2006:34) this process something is, at least in part, to be settled
by intervening sometime prior to the overt (but not necessarily irrevocably) on doing
it. . . . Wanting to do something is compat-
bodily motion but after we have become
ible with being unsettled about whether to
conscious of the impending act. This leaves do it (2006:31; emphasis ours).
about 150 ms for us to veto an impending
bodily motion. Libet claims, then, that ac- If “intentions” and “desires” are not the
tions actually begin around 550 ms prior to same thing, then we must reconsider what
overt bodily motion, and he interchange- might be occurring at 550 ms prior to a
March 2008 “SCI-PHI” SYMPOSIUM 21
bodily movement. Recall that in the “veto” necessary conceptual distinctions. In addi-
case, when group members are asked to tion, Libet’s experiments may result in an
prepare to flick but then veto the move- increase in explanatory power if we allow
ment, subjects are instructed prior to the Mele’s distinctions to lead us to further,
experiment not to flick their wrist or fin- more precise experimental designs. This is
gers. Therefore, compliant subjects in- the kind of work of which conceptual anal-
tended to comply with the request. “So ysis is capable, and its introduction into
what is indicated by the RP? Presumably, various scientific fields has proven useful.
not the acquisition or presence of an inten-
tion to flex; for then, at some point in time, 2. Paradigm Stultification
the subjects would have both an intention Another philosophical difficulty for sci-
to flex at the prearranged time and an entists is clarifying the nature and implica-
intention not to flex at that time” (Mele tions of experimental conclusions. Certain
2006:34). If “intentions” really do entail methods, while rife with useful results, pro-
being settled on performing a certain ac- duce data that fit a markedly determinate
tion, then we run into a problem with Li- pattern. On the one hand, this might indi-
bet’s interpretation. Mele asks, “How can a cate that an instrument is operating exactly
normal agent simultaneously be settled on as it should. On the other, it might indicate
A-ing at t and settled on not A-ing at t?” that the instrument is structured to pro-
(2006:34). duce a certain kind of result rather than
But if the RPs do not pick out “inten- accurately depicting a feature of reality.
tions,” what do they identify? RPs may be Philosophers are particularly adept at ask-
correlated with “urges” or “desires” to flex, ing the kinds of questions that lead to
which could result from wanting to comply changes in inadequate paradigms.
with the researchers’ instructions, and A major research tool for populaion ecol-
which could be correlated with other brain ogists is environmental modeling. There is
events that lead reliably to the production an old debate in this area that begins with a
of overt actions (Mele 2006:36). Another problem about adaptationism and the struc-
possibility is suggested by the research of ture of what are called “optimality” models.
psychiatrist Sean Spence and neuroscien- Optimality models attempt to explain the
tist C Frith (1999), who point out that the distribution of particular phenotypes within
brain activity associated with “imagining” a population by identifying those factors,
performing a bodily motion is very similar whether environmental or genetic, that cor-
to the brain activity associated with prepar- relate with changes in that particular trait.
ing to make a movement. And this activity These models do not purport to show that
could be well underway prior to any con- an organism or population optimizes its
scious recognition of an urge to perform traits, since changes in environment and ge-
an overt action. netics occur regularly enough to rule this
Setting aside the obvious philosophical out. Neither is a model supposed to show
implications of this reinterpretation of the which trait would be optimal for a popula-
data for free will, Mele thinks that these tion, but merely whether one trait possesses
revisions would assist Libet in better char- certain selective features in contrast with an-
acterizing his own findings. He writes, “I other, given an environment and gene set at
believe that if Libet himself were to distin- a time.
guish between intending and wanting . . . Biologist Richard Lewontin (1977) criti-
along the lines I have sketched, he might cized optimality models as being more a
find it more credible to associate the readi- “test of ingenuity” than an inquiry into the
ness potentials with the latter than with the state of nature. Often, a model captures
former” (2006:33). Mele concludes that Li- part of an observable phenomenon but is
bet’s pronouncements concerning inten- then contradicted, for example, by the the-
tionality and the conscious will as a veto ory proposed, or by independent data. If a
faculty are unwarranted once we make the model fails in this way, theorists typically
22 THE QUARTERLY REVIEW OF BIOLOGY Volume 83
revise its parameters so that it accurately to further tests in order to ensure their
depicts the phenomena without contradic- generalization across experiments. May-
tion. This solution appears too simplistic, nard Smith argued that we must resist
for it seems that any theory could be ade- modifying the model “and at the same time
quately modified so that it always comes [claiming] that the model is confirmed by
out true. Lewontin writes: “By allowing the observation” (1994:100). This restriction
theorist to postulate various combinations reminds the theorist that explanations can-
of ‘problems’ to which manifest traits are not be revised for old data. New data must
optimal ‘solutions,’ the adaptationist pro- be produced for each revision to prevent
gramme makes of adaptation a metaphysi- models from becoming inwardly trivial
cal postulate, not only incapable of refuta- with respect to biased data sets.
tion, but necessarily confirmed by every Ecologists recognized early on that there
observation” (Maynard Smith 1994:99). were problems with optimality models
Biologist John Maynard Smith agreed (Mangel and Clark 1988:4), but few at-
with Lewontin’s criticism, but argued that tempts were made at moving beyond the
a theorist can make two adjustments to standard construction. Despite the fact
prevent unwarranted conclusions from op- that these models were empirically useful
timality models. The first adjustment con- in sustaining ecological research, and also
cerns the complexity of the theory. If a that Maynard Smith’s adjustments coun-
theory is too simple, Lewontin’s criticism is tered Lewontin’s original criticisms, prob-
successful, “particularly [for] a model that lems mounted. Insistence on this version
assumes each organ or behavior to serve of optimality model is indicative of a resis-
only one function” (Maynard Smith 1994: tance to methodological change. Philo-
99). For each discrepancy, a modeler adds sophical challenges eventually pressed
assumptions to meet the challenge. But if ecologists to reject the standard program
the model has had some measure of qual- (Mangel and Clark 1988:4), and the cur-
itative success, then there is no reason to rent conception of modeling predomi-
think that the modification renders the nantly follows Colin Clark and Marc Man-
theory or model unfalsifiable. Therefore, gel’s “dynamic state variable optimization”
increasing the specificity of the model will formulas (1988; 2000). This example high-
reduce the possibility of constructing an lights how philosophical questions are par-
irrefutable theory. For example, it is easy to ticularly relevant to specific scientific
say that male dung flies copulate to maxi- projects, and that philosophers are trained
mize their reproductive success. It is much to ask these kinds of questions.
more difficult to explain “why they copu-
late for 35 minutes rather than 5 minutes or 3. Ethical Indifference
2 hours” (Sober 2000:137; emphasis his). Although science remains the standard
Thus, if some relevant revisions make by which to judge descriptive claims and
the problem more specific, and therefore phenomena, few scientists have trod into
more difficult, the model should still pro- the realm of values. Normativity has tradi-
duce fruitful results, even if a few incon- tionally been considered off-limits to sci-
sistencies arise in individual cases. ence, given that, as Hume noted, “is”
The second adjustment is to restrict re- claims entail nothing concerning “ought”
vised theories from being read back onto claims, and science is an “is”-oriented
previous observation statements. If theo- discipline (1739-1740/2000:293–302). But
ries can be altered to fit the data after the ever greater advancements in technology
fact, then they can never be falsified. Aug- raise critical moral questions that loom
mentation of theories is not controversial: over scientific discussions, demanding ad-
“Since all [these theories] have had quali- equate treatment, e.g., our increasing need
tative success, it seems quite appropriate to for mood-altering pharmaceuticals, grow-
modify them” (Maynard Smith 1994:99). ing concern over human genetic engineer-
But these modifications must be subjected ing, and even some old concerns rekindled
March 2008 “SCI-PHI” SYMPOSIUM 23
conclusions about the origin of ethical our evidence, including our moral intui-
claims. Implicitly they have presupposed a tions. These inferences map the possibilities
concept of value—perhaps that value is es- for plausible normative frameworks. This
sentially behavioral, or that the content of may be unsatisfactory to some scientists, but
value is expressed behaviorally—and then recall the request of Nisbett and Ross. They
provided empirical evidence that explains ask that philosophers develop appropriate
behavior as grounding that concept. Prior normative strategies for interpreting and in-
to presenting the evidence, they have en- forming empirical projects. Such strategies
gaged in a philosophical project concern- may provide materials for hypothesis forma-
ing the nature of value. And, whereas they tion and experiment construction. This is
assume empirical evidence informs their evidence that philosophers have something
morality, it turns out that a prior philo- to say to scientists concerning morality and
sophical framework is presupposed, which normativity.
then does the work in connecting the em-
pirical data to their conclusion. 4. Scientism and Methodological
Even if their conclusion could be sup- Openness
ported on the basis of a developed moral Scientism is roughly the position that
theory, it is evident that philosophical work philosophy should restrict its methods,
is necessary. Consider, alternatively, that findings, and ontology to those of the nat-
humans, as biological creatures in a mate- ural sciences, going beyond them only lin-
rial world, discovered and developed the guistically or theoretically to address espe-
use of logic and mathematics. The way we cially pernicious terminological problems.
learned to use these concepts is a function This means that, as used here, following
of our socialization (e.g., times tables). the example set by Paul Moser and David
Our minds might have even been directed Yandell, scientism has both metaphysical
by epigenetic rules to discover at least ru- and methodological elements. This is ad-
dimentary inductive reasoning strategies. mittedly strong since scientism is typically
Finally, there may be evolutionary reasons only associated with discussions of scien-
for us to avoid fallacies such as hasty gen- tific ontology.
eralizations and begging the question. De- In Moser and Yandell’s defense, any ap-
spite all this, most of us do not think that peal to science as exclusive and exhaustive
true logical and mathematical propositions for human activity enforces restrictions on
are relative to “the particular nature of in- methodology. In addition, any methodol-
dividual species.” The perception of logical ogy that restricts itself to science must also
and ethical connections may, of course, be provide an empirical basis for this restric-
relative to the set of rational beings, but in tion. Therefore, the question of justifica-
neither the logic and math case nor the tion becomes paramount for any constella-
ethical case do these developmental pro- tion of naturalistic theses. Of course, one
cesses show that there is anything objective may reject naturalism as a thesis (see
or mind-independent about the claims. Maddy 1997 for an example), but then one
The result is that, whatever answer we give faces further epistemic questions about the
to the question about the nature of ethical truth-functional efficacy of pragmatism
claims, it will not be scientific. and/or theoretical virtues. Although “sci-
But, in this regard, do philosophers make entism” is typically used pejoratively, indi-
any progress? Philosophers construct con- cating the reification of science, certain
ceptual frameworks for understanding the naturalistically inclined philosophers have
options available for explaining and justify- adopted the term (Fodor 2002:30 –31).
ing moral claims. Since moral facts, if they The power and success of science has led
exist, do not operate like natural laws (i.e., some to rather extreme views about its
compelling assent), we must, at some point, viability. We may recall—with a certain
make a rational inference, seeking the moral twinge—the earlier quotation from Rich-
framework that best captures the totality of ard Lewontin. Recently, philosophers Paul
March 2008 “SCI-PHI” SYMPOSIUM 25
Moser and David Yandell (2000) have of- rather unscientific. “Core Scientism pro-
fered several arguments showing the defi- poses a universality of scope for the em-
ciencies of scientism. If Moser and Yandell pirical sciences that they themselves es-
are correct, the very formulation of “Core chew. . . . [E]mpirical science as a whole is
Scientism” prevents the view from having marked out by its attempt to explain all
any explanatory force. empirical data and thus by the range of all
Moser and Yandell identify what they ar- empirical data” (Moser and Yandell 2000:
gue are the basic tenets of Core Scientism, 11). Therefore, any claim about every real
which they take to comprise the concept of entity and every legitimate method of ob-
naturalism. They claim that scientism de- taining knowledge from a naturalistic per-
pends on two theses, which may or may not spective should be checked by the limita-
be independent: tions that empirical research imposes on
Core Ontological Naturalism: every real entity itself.
either consists of or is somehow ontically Now, it may be argued that, though sci-
grounded in the objects countenanced by entism may not be included in or entailed
the hypothetically completed empirical sci- by any empirical research program, sci-
ences (that is, in the objects of a natural ence operates predominantly by abductive
ontology). reasoning, which allows us to speak legiti-
Core Methodological Naturalism: every legiti- mately beyond any direct finding of sci-
mate method of acquiring knowledge con- ence. Since this is the case, can we say that
sists of or is grounded in the hypothetically empirical research provides a great deal of
completed methods of the empirical sci- epistemic warrant for scientism? Moser
ences (that is, in natural methods) (2000: and Yandell argue that this is insufficient
10). to justify scientism. They claim that this
They argue that these theses lead the nat- move shifts the focus of the discussion to
uralist to a dilemma. “Either Core Scient- questions about the principles of epistemic
ism is not itself a thesis included in or warrant appropriate for reasoning within
warranted by the (hypothetically com- the natural sciences:
pleted) empirical sciences or its warrant Are any such principles of [epistemic] war-
depends on a special reformulation of the rant required, logically or epistemically, by
‘proper understanding’ of empirical sci- the . . . empirical sciences themselves? No
ence” (Moser and Yandell 2000:13). Since such principles seem logically required, as
it seems obvious that any special reformu- the . . . empirical sciences logically permit
lation of the understanding of science will that Core Scientism is not warranted.
be a matter of “semantical fiat” that is, at Whether such principles are epistemically
best, ad hoc, and, at worst, simply false, required depends on the epistemic princi-
ples warranted by the . . . empirical sci-
they focus on the first half of the dilemma.
ences, and the latter remains unsettled
Moser and Yandell distinguish ontological (Moser and Yandell 2000:12).
naturalism from methodological natural-
ism but direct their criticism at the con- Moser and Yandell argue that the onus is
junction. Although our criticism is also di- on the naturalist to show exactly why em-
rected at that conjunction, we feel it is pirical science warrants Core Scientism.
applicable to the methodological compo- We agree that Core Scientism fails epis-
nent independently of the ontological temic warrant, and we think another argu-
component, and this motivates our sug- ment can expand the scope of the criti-
gested alternative. cism. Perhaps a naturalist could claim that
It would be convenient for naturalists if her belief in Core Scientism is something
Core Scientism could be formulated so akin to a “properly basic belief,” needing
that it is entailed by a research program or no strong justification (see Plantinga 1983
finding of the empirical sciences, whether and 1993 on the specifics of basic and
current or complete. But the monopolistic properly basic beliefs). She could argue
character of the tenets of Core Scientism is that the conjunction of all of her com-
26 THE QUARTERLY REVIEW OF BIOLOGY Volume 83
ciplinary give and take (1997:13–18). Our tudes and terms and look for coherent,
suggestion, then, is modest. Let us drop productive solutions. There is the danger
the scientistic assumption, since even if it that methodological openness will lead us
can be formulated coherently, it adds no to a strange view of reality. But even if it
virtue to our theories. Let us place the leads us to an even stranger view of reality
compendium of our rational faculties in than superstrings, or to realism about uni-
the service of difficult philosophical, scien- versals, or even the existence of God, so be
tific, and mathematical problems. Most of it. These conclusions will be the result of
us already use such a method— call it meth- good reasoning, checked and balanced
odological openness— even if we try to avoid it within the “dynamical system.” So, to bor-
or explicitly renounce it by calling our- row from Moser and Yandell, “antiscient-
selves “naturalists.” But intellectual honesty ism is in no way antiscience or antiscien-
requires that we shed unproductive atti- tific” (2000:11).
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