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(BioT 405)
&
Introduction
This practical handout is a collection of practical activities aimed at introducing the user to a range of interesting and thought provoking fermentations. The investigations have been designed so that on completion they will give the user a new insight into fermentation. It is also hoped that the extension activities will lead on to other more demanding investigations designed by the students themselves. Many of the extensions activities focus on activities that allow the application of statistical analysis.
The authors hope that that the practical will not only form the basis for the class activities but also the stimulus for individual invitations into fermentation.
The Authors
Safety Guidelines
All investigations should be carried out using good laboratory practice. Given here are a few brief notes and hints to help those involved in the various activities to carry them out safely. Remember that before any practical activity is undertaken a risk assessment should be performed to ensure there is minimal hazard to all concerned. If there is any doubt about the assessment of the risk, reference must be made to safety texts or expert advice taken.
Safe microbiology
The practical activities selected in this package and the microorganisms suggested present minimum risk given good practice. It is therefore essential that good microbiology laboratory practice is observed at all times when working with any microbes.
There are five areas for consideration when embarking on practical microbiology investigations which make planning ahead essential.
1. Preparation and sterilization of equipment and culture media. 2. Preparation of microbial cultures as stock culture for future investigations and inoculum for current investigation. 3. Inoculation of the medium with the prepared culture. 4. Incubation of cultures and sampling during growth. 5. Sterilization and safe disposal of all cultures and decontamination of all contaminated equipment.
Good organizational skills and a disciplined approach ensure that every activity is performed both safely and successfully.
Protection
Food or drink should not be stored or consumed in a laboratory that is used for microbiology. One should not lick labels, apply cosmetics, chew gum, suck pens or pencils or smoke in the laboratory. Hands should be washed with disinfectant soap after handling microbial cultures and whenever leaving the laboratory. If hand contamination is suspected then the hands should be washed immediately with disinfectant soap. To ensure that any wounds, cuts or abrasions do not get infected or infection is passed on, protect them by the use of waterproof dressings or wear disposable surgical gloves.
Aseptic technique
Sterile equipment and media should be used to transfer and culture microorganisms. Aseptic technique should be observed whenever microorganisms are transferred from one container to another. Contaminated equipment should preferably be heat sterilized by either incineration or autoclaving. A suitable chemical disinfectant can be used but this may not ensure complete sterilization.
Two general processes: the batch technique and the continuous flow technique are used in industry for large-scale cultivation of microorganisms.
The batch technique; employs a huge tank with a volume of upto 100,000 gallons of medium. The tank is often called a fermentor because industrial microbiologists use the word fermentation to refer to any aerobic or anaerobic process catalyzed by microorganisms. The medium is sterilized with steam or with a gas such as sulfur dioxide, and enough microorganisms are allowed to grow for days, weeks or months, then they are removed and the product is isolated from the materials in the tank. In some cases, the organisms may be used as feed for animals.
In the continuous flow technique (Figure 2), medium is continually added to replace that which has been fermented. An instrument called a chemostate is used to provide a constant flow, and the microorganisms are kept in the logarithmic stage of growth.
2. Principles of a bioreactor
Before a bioreactor can be used for microbial growth investigations the vessel and its contents must be sterilized by autoclaving. Autoclaving involves using steam under pressure and ensures the complete destruction of microorganisms and their spores. The bioreactor must be correctly prepared to ensure successful sterilization. The individual components of the bioreactor must be clean and then carefully assembled. Care should be taken to ensure the correct vents are fully open or closed for autoclaving. The assembled bioreactor should be filled with broth just before autoclaving. The autoclave time is worked out by choosing a temperature (e.g. 121C) and calculating total sterilization time. The total time consists of (a) heat penetration time, (b) holding time to kill all organisms and (c) safety margin (e.g. 5+10+5 = 20 min). It is important to close the addition/ inoculation port immediately after autoclaving so that the bioreactor remains sterile.
3. Growth Curve
Microbial growth is an orderly increase in cellular components that is usually followed by cell division. Under optimal conditions growth is an orderly increase or doubling of all cellular components and is termed balanced growth.
Microbial growth under conventional conditions follows it predictable course. Upon inoculation into a fresh medium, the culture exhibits an initial lag in the increase in cell numbers. During this period cells are increasing in size while adapting their synthetic capacity (that is. DNA. RNA. And protein synthesis) for optimal growth this phase is followed by a period of exponential growth during which the culture is in balanced growth and the growth rate is constant. In time, the culture exhausts essential nutrients in the environment. And toxic wastes build up eventually slowing the growth rate. As adverse environmental conditions worse. The increase in cell numbers stops. And with time, the cell population begins to decline.
One can follow the growth of a microbial culture by measuring changes in cell mass, viable counts, or any chemical constituent of the cell (for example. RNA or protein). In this experiment you will follows the growth of a microbial culture by measuring two parameters: cell mass and viable count. This gives you the opportunity to compare the relationship between the two methods.
The bacterium used in this exercise is Beneckea natriegens. It is a gram-negative rod related to the pseudomonads. Because of its rapid growth rate, this species is ideally suited for this exercise. It is an obligate halophilic organism. And all media and dilution blanks will be supplemented with 1.5% Na Cl.
Procedure
You will work in pairs to perform this experiment. Initially you will inoculate a tube of brain heart infusion broth containing 1.5% NaCI with R. natriegens (your instructor will indicate the Inoculum size to be used). 1. Immediately after inoculating, read and record the absorbance of the culture tube at 650 nm using the photometer or spectrophotometer provided. Following these absorbance measurements. Immediately incubate the culture at 37 oC on the shaker provided. 2. Continue taking absorbance readings at 15 minute intervals until the absorbance no longer the culture.
The Bacterial Growth Curve In the laboratory, under favorable conditions, a growing bacterial population doubles at regular intervals. Growth is by geometric progression: 1, 2, 4, 8, etc. or 20, 21, 22, 23.........2n (where n = the number of generations). This is called exponential growth. In reality, exponential growth is only part of the bacterial life cycle, and not representative of the normal pattern of growth of bacteria in Nature. When a fresh medium is inoculated with a given number of cells, and the population growth is monitored over a period of time, plotting the data will yield a typical bacterial growth curve
Figure 1 The typical bacterial growth curve. When bacteria are grown in a closed system (also called a batch culture), like a test tube, the population of cells almost always exhibits these growth dynamics: cells initially adjust to the new medium (lag phase) until they can start dividing regularly by the process of binary fission (exponential phase). When their growth becomes limited, the cells stop dividing (stationary phase), until eventually they show loss of viability (death phase). Note the parameters of the x and y axes. Growth is expressed as change in the number viable cells vs time. Generation times are calculated during the exponential phase of growth. Time measurements are in hours for bacteria with short generation times.
Four characteristic phases of the growth cycle are recognized: 1. Lag Phase. Immediately after inoculation of the cells into fresh medium, the population remains temporarily unchanged. Although there is no apparent cell division occurring, the cells may be growing in volume or mass, synthesizing enzymes, proteins, RNA, etc., and increasing in metabolic activity.
The length of the lag phase is apparently dependent on a wide variety of factors including the size of the inoculum; time necessary to recover from physical damage or shock in the transfer; time required for synthesis of essential coenzymes or division factors; and time required for synthesis of new (inducible) enzymes that are necessary to metabolize the substrates present in the medium.
2. Exponential (log) Phase. The exponential phase of growth is a pattern of balanced growth wherein all the cells are dividing regularly by binary fission, and are growing by geometric progression. The cells divide at a constant rate depending upon the composition of the growth medium and the conditions of incubation. The rate of exponential growth of a bacterial culture is expressed as generation time, also the doubling time of the bacterial population. Generation time (G) is defined as the time (t)
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per generation (n = number of generations). Hence, G=t/n is the equation from which calculations of generation time (below) derive.
3. Stationary Phase. Exponential growth cannot be continued forever in a batch culture (e.g. a closed system such as a test tube or flask). Population growth is limited by one of three factors: 1. exhaustion of available nutrients; 2. accumulation of inhibitory metabolites or end products; 3. exhaustion of space, in this case called a lack of "biological space".
During the stationary phase, if viable cells are being counted, it cannot be determined whether some cells are dying and an equal number of cells are dividing, or the population of cells has simply stopped growing and dividing. The stationary phase, like the lag phase, is not necessarily a period of quiescence. Bacteria that produce secondary metabolites, such as antibiotics, do so during the stationary phase of the growth cycle (Secondary metabolites are defined as metabolites produced after the active stage of growth). It is during the stationary phase that spore-forming bacteria have to induce or unmask the activity of dozens of genes that may be involved in sporulation process.
4. Death Phase. If incubation continues after the population reaches stationary phase, a death phase follows, in which the viable cell population declines. (Note, if counting by turbidimetric measurements or microscopic counts, the death phase cannot be observed.). During the death phase, the number of viable cells decreases geometrically (exponentially), essentially the reverse of growth during the log phase.
Growth Rate and Generation Time As mentioned above, bacterial growth rates during the phase of exponential growth, under standard nutritional conditions (culture medium, temperature, pH, etc.), define the bacterium's generation time.
Generation times for bacteria vary from about 12 minutes to 24 hours or more. The generation time for E. coli in the laboratory is 15-20 minutes, but in the intestinal tract,
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the coliform's generation time is estimated to be 12-24 hours. For most known bacteria that can be cultured, generation times range from about 15 minutes to 1 hour. Symbionts such as Rhizobium tend to have longer generation times. Many lithotrophs, such as the nitrifying bacteria, also have long generation times. Some bacteria that are pathogens, such as Mycobacterium tuberculosis and Treponema pallidum, have especially long generation times, and this is thought to be an advantage in their virulence.
The spread plate method is used for determining cell numbers: 3- Aseptically add 1.0 cm3 of the broth culture to 9.0 cm3 of saline to obtain the first dilution (10-1). 4- Take 1.0 cm3 of the diluted broth culture to 9.0 cm3 of saline to obtain the second dilution (10-2). 5- A series of dilutions should be made in a similar way to give dilutions in the range of 10-6 to 10-8. 6- Using a sterile spreader spread 0.1 cm3 of one dilution evenly over the surface of a saline agar. 7- Incubate the plates overnight at 30C. 8- Examine all plates and select the most appropriate (30 - 300 colonies) and count the number of colonies on each. Calculate the number of bacterial cells per cm3 of each sample. Plot a growth curve of log number against time and calculate the mean generation time. 12
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Example: What is the generation time of a bacterial population that increases from 10,000 cells to 10,000,000 cells in four hours of growth?
G=
a. Aerobic bacteria: require O2 for growth and can grow when incubated in an
atmosphere (21% O2).
b. Anaerobic: do not use O2 to obtain energy; moreover, oxygen is toxic for then
and they cannot grow when incubated in an air atmosphere. Some can tolerate low levels of O2 (non-stringent anaerobes) but others (stringent or strict anaerobes) cannot tolerate. Even low levels and may, upon brief exposure to air.
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d. Aerotolerant anaerobes: Cannot use but tolerate it though their growth may
be enhanced by.
Procedure:
1- Melt three tubes of yeast extract agar and hold at 100 O C for 10 minutes to expel
the dissolved O2.
2- Cool to a temp. of 45O C and inoculate each with one of the cultures E. Coli,
Micrococcus and Clostridium. Gently shake.
3- Solidify the agar. 4- Incubate at 37 O C for 2 days and observe the location and appearance of growth.
Anaerobic culture:
Anaerrobsis can be achieved by several methods: 1, The use of deep medium: Deep agar supports the growth of anaerobic bacteria.
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2-The use of special anaerobic media: Several media containing reducing substances could be used for anaerobic bacteria: a- Thioglycolate broth: Strict aerobes grow in the surface region of thioglycolate broth where more oxygen is present, while: obligate anaerobes grow throughout the depths of the broth. Microaerophils grow in the region between the oxygenated surface and the anaerobic depth. b. Robertson cooked meat medium: It consists of slices of meat in broth the meat particles contain hematin, glutathione and lipids which are reducing agents. 3. Removal of oxygen and replacing it will an inert gas.
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Selected colonies (rough, chalky) of actinomycetes are transferred from mixed culture of the plates onto respective agar plate and incubated at 28 OC 30 OC for 7 days.
The selected isolates were preserved in glycerol 20% and stored at 4 OC for further investigation.
The studied isolates are grown on starch nitrate agar, sucrose nitrate agar, glycerol asparagines agar oat meal agar and fish meal extract agar. After 7 days of incubation, at 28 OC, agar discs, 6 mm in diameter, were cut off by a cork borer and transferred to the surface of agar plates freshly inoculated with the test organisms, the bacterial test organism are cultivated on nutrient agar whereas yeasts and fungi are cultivated on malt extract agar and sucrose Czapek Dox agar respectively, the diameter of the inhibition zone of the test organism are measured after 24 hours for bacteria and 48 hours for yeast and fungi.
Erlenmeyer flasks - 250 ml, capacity containing 50ml liquid medium are inoculated with the experimental isolates and kept at 28 OC on a rotary shaker 200 r.p.m for 5 days. Aliquots of 0.2ml of the fermented broth were transferred to wells bored in agar plates, previously inoculated with the test organisms. The Petri dishes were kept in a refrigerator for diffusion for two hours just before incubation at 37 OC for 24 hours, for bacteria, at 30
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C for 48 hours for yeast and 72 hours at 25-30 OC for filamentous fungi. The diameters
of inhibition zones around the well are measured after 24 or 48 hours of incubation periods. The inhibition zones are an indication of the antimicrobial activity of isolates.
Analytical paper disk (10 mm in diameter) are saturated with fermentation broth and aseptically placed onto the surface of the inoculated pates with different test organisms. The Petri dishes were kept in a refrigerator for diffusion for two hours just before incubation at 37 OC for 24 hours for bacteria, at 30 OC for 48 hours for yeast and 72 hours at 25-30 OC for fungi. The diameter of inhibition zones around the filter paper discs is measured.
Procedure
The clear broth was concentrated, in vaccuo, and either extracted by different solvents (e.g. chloroform, ethyl acetate, diethyl ether) or applied directly to the paper. 50mg of the antibiotic solution is applied to a chromatographic paper strip (2cm X 30cm) using a micropipette. Different developing solvent systems are used for ascending paper chromatography: Petroleum ether saturated with water. Diethyl ether. Chloroform.
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Ethyl acetate. Butanol acetic acid water (2: 1:1 v/v). Acetone.
The antibiotic spots are detected by bio-autography against Bacillus cereus as a test organism: Chromatograms of the investigated antibiotic previously developed in appropriated solvent systems are dried and placed on the surface of nutrient agar plates freshly inoculated with sensitive test organism e.g. B. cereus. The width of inhibition zones is determined. The Rf values, in different developing solvents are recorded. The classes of the antibiotic are determined by comparing its Rf values in different solvents with those obtained by authentic or known antibiotic.
5.4. Fermentation, extraction, isolation and separation of the antibiotic from culture broth
5.4.1 Fermentation
For the process of antimicrobial agent (s) biosyntheses by the submerged fermentation conditions used, in which conical flasks of 250 ml capacity charged with 100mml of inorganic salt-starch agar medium (g/l) (soluble starch 20g; K2HPO4 (anhydrous), 1g; MgSO4.7H2O, 1.5g; NaCl, 1g; (NH4)2SO4, 2.5g; CaCO3.H2O, 2.0g; distilled water, 1000ml and trace salt, 1.0ml). pH of the media was adjusted at 7, then the emdia autoclaved. 3 discs of the culture were inoculated to each flask and incubated at 30OC for 7 days on a rotary shaker at 250 r.p.m.
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5.4.3. Extraction
The cell free filtrate was adjusted at pH 7 and extracted by chloroform as the suitable solvent. The solvent was added to the fermentation broth at the level of 2:1 (V/V) respectively. The organic phase was collected evaporated under reduced pressure by using a rotary evaporator, the evaporation was continued until viscous syrup was dissolved in the least amount of solvent and filtered through whatman No.1 filter paper and then tested for its antimicrobial agent activity.
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Table: Showing data of the isolation procedure of the produced antimicrobial agents produced by Streptomyces sp. Antimicrobial agent activity in terms of mean diameter Solvent used of inhibition zones (mm) B. Subtilis S. aureus E. coli C. albicans
ATCC 6633 ATCC 6538 ATCC 8739 ATCC 1023 1- Ethyl acetate 2- Chloroform 3- Diethyl ether 4- n- Butanol 5- Ethyl acetate+ chloroform 6- Benzen 7- Chloroform + n- Butanol 8- Ethyl acetate + n-Butanol
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It is used in preparing adhesive, clarifying fruits juices, liquefaction of starch in alcohol fermentation, additive in detergents, manufacturing of pharmaceutical products and for other products.
Producing organisms
Different bacterial and fungal species can be used, e.g. Bacillus spp., Streptomyces spp., and Rhizopus spp.
Procedure
The medium used contains soluble starch, 5g; yeast extract, 2g; KH2PO4, 1g; MgSO47H2O, 0.5g and distilled water 1L.
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The pH after autoclaving is 7.2 Three discs (6mm diameter) of each organisms (4-day old) was used as Inoculum. The flasks are filtered and amylolytic activity is determined in culture filtrates as follows:
1. -
Agar-cup plate diffusion method: Amylase activity of each culture filtrate is determined by pipetting 0.1 ml of the filtrate into activity bored in a starch assay medium in Petri-dishes using sterile cork borer
- The assay agar medium used is: Soluble starch 5g Distilled water 1L. The dishes were incubated at 30c for 24 hrs and then the assay agar medium is flooded with iodine solution. Uninoculated medium did not show any amylase activity. The width of clear non blued zone around the activity is measured in mm after 24 hr.
II) Assay of amylolytic activity by estimation of released reducing sugars:3 ml enzyme solution + 0.5% starch in 0.2 m phosphate buffer, PH 6.5. Similar reaction mixtures using heated inactive enzyme solution are also prepared as control. The reaction mixture is incubated in water bath at 37c for 30 min. The released reducing sugars due to the amylolytic activity are determined.
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2- Production of Protease
The term protease refers to a mixture of enzymes that break down proteins. Proteins Proteolytic Enzymes peptides amino acids
Producing organisms
Many bacteria can degrade a variety of proteins. Most Streptomyces spp., Bacillus subtilis and other Bacillus species, Aspergillus oryzue.
Procedure
1- Obtain two Petri plates of skim milk agar. 2- Inoculate one plate with E.coli and the other with B. subtilis using a loop to place cells in the center only. 3- Incubate at 37C until the next laboratory period. Colonies of organisms that digest casein (Proteolytic microbes) will be surrounded by clear zones. Areas in which the casein has not been attacked will remain slightly opaque. You can usually see the clear zones best against a black background. 30
3- Production of cellulase
Cellulose is one of the most abundant naturally occurring organic materials on earth. The vast quantities of available cellulosic materials have great potentialities as a reservoir for energy and chemical resource. Cellulose is a linear homopolymer of glucose units linked together by 1.4 glucosidic bonds of indefinite length, complete hydrolysis yields the monosaccharide glucose while partial hydrolysis yields the disaccharide cellobiose.
b- In liquid cultures : In this experiment different actinomycetes isolates are tested for their ability to produce cellulase enzyme cultivation is in 250 ml conical flasks each containing 50 ml of sterile medium containing 4/g /L cellulose or carboxy methyl cellulose as a sole c source mixed with mineral salts. After autoclaving, the medium is adjusted to pH 7.5 with 5 N sterile NaOH. 31
Flasks incubation, the culture medium from each flask is filtered to separate the mycelium from the culture filtrate.
a- Estimation of cellulytic activity by agar plate method: The procedure consists of incorporation of 1% of cellulose or carboxy methyl cellulose in 2% agar solution, poured in Petri dishes to give 4 mm layer. Enzyme activity of each culture filtrated is determined by pipetting 0.1 ml of the filtrate into a well bored in cellulose assay medium in Petri dishes the dishes are incubated at 28 C for 18-24 hours. Estimation of cellulose is made from the clear zones produced a around the pores. Zone diameter is measured and the activities are calculated from the standard. b- Quantitative estimation of cellulase. The reducing sugars liberated by cellulase in the culture broth are estimated. Assay of cellulase mixture consisted of 2.0 ml of the culture filtered and 18 ml citrate phosphate buffer (pH 5) containing the substrate carboxy methyl cellulose (CMC) the reducing sugars released from cellulose substrate are determined as glucose using Somegy`s methods .
4. Production of lipase
Purpose
To demonstrate the fat-splitting action of microorganism. i.e. the presence of lipolytic enzymes. To indicate the reaction of these enzymes to problems of food spoilage. Especially those rich in fatty substances.
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Materials
1. Cultures (broth- 24 hours). a. Peseudomonas florrescens. b. Escherichia coli. C. Bacillus subtilis. D. Serratia narcescens.
2. Nutrient agar for plating (M-xx1) (2 tubes). 3. Fresh vegetable fat. 4. Copper sulfate solution (rp-VII). 5. Sterile Petri dishes (2). Sterile pipette. 1-ml.(1) NOTE: If the plates are prepared by the instructor. A more even distribution may be obtained by the use of a homogenizer.
Procedure
1. To each of two tubes of melted agar, add about 0.2 or 0.3 ml of a vegetable fat (cottonseed or coconut oil), using a sterile pipette. 2. Rotate the tubes thoroughly between the palms of the hands until the fat is well distributed in the agar. 3. Pour contents of each table into a sterile Petri dish, and allow the agar to solidify. 4. Inoculate one plate by making a short (streak with P. fluorescens and a second streak with S. marcescens, labeling both. Do likewise with E. coli: and B. subtilis on the second plate.
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5. Incubate in an inverted position at 30o C. or room temperature for 4 days. 6. After Incubation, flood both plates with the copper sulfate solution permitting it to remain in contact for 10 to 35 minutes. Pour off the excess. 7. Examine plates for a greenish sheen along and under of growth this is best done in reflected light.
Record of Results
Tabulate as follows: Organism Lipolytic Activity
5- Keratinase:
Some microorganisms are known for their ability to hydrolyze febrile proteins e.g keratin of hair wool horns and feather yielding a mixture of peptides and amino acids.
Uses
Keratinase is used for unhairing of hides, leather industry, skin treatment and cosmetics and in pharmaceutical chemical. Production of protein and peptides from wastes for animal feed.
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Procedure
-8 flasks (250 ml) containing 50 ml inorganic salt broth media without nitrogen source. -Add 50 g of each keratin to two flasks including sterile feather, hairs, wool. Three discs of each organism were used as at 28 30 for 15 days. The activity is determined by measuring the filtrate by Folin reagent for detection of peptides.
CH O 6 12 6 Glucose
CH COCOH 3
Pyruvic acid
Lactic acid bacteria are Gram +ve rods or cocci; microaerophilic or facultative anaerobes that are common in dairy products, fermented food, mouth and gastrointestinal tracts of human and animals. 35
Lactic acid bacteria are responsible for the souring taste of pickles and yogurt.
The drop in pH of the medium is unfavorable for the growth of other bacteria.
b. Boil for 1-2 minutes to get rid of all Co2/ c. Titrate against 0.1N: NaOH using phenolphthalein indicator.
X 100 X A X B X C D
1 1000
Normality of NAOH
90 D volume of sample
Although acetic acid is produced by many fermentative bacteria, only members of a special group, the acetic acid bacteria, are used in commercial production. The acetic acid, bacteria can be divided into 2 genera, Gluconobacter and Acetobacter. Over a hundred types of both genus have been used for production. Vinegar contains about 3 to 5% acetic acid, Production of vinegar, involves two types of biochemical changes: 1. An alcoholic fermentation of a carbohydrate by yeast (anaerobic fermentation). 2. Oxidation of the alcohol to acetic acid by acetic acid bacteria (aerobic process). There are several kinds of vinegar and the differences among them are primarily associated with kind of material used in the alcoholic formation, e.g. fruit juices, sugar syrups and hvdrolyzed starch materials.
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Productions process in industry is aerobic and involves the adsorption of acetic acid bacteria (Acetobacter on to wood chips that are packed into column, an aerated solution of ethereal is passed through the column, ethanol is converted to acetic acid. Acetic acid production can be detected by inoculating conical flasks containing 10-13%, ethanol by Acetic acid bacteria. Shake the ethanol solution well. After incubation for 2-3 days smell the sample of the culture and smell of acetic acid. Add 2 drops of phenol phethaline indicator to 10 drops sample. Titrate with NaoH until the first sign of pink appears, record the amount of NaOH added. Calculate the amount of acid produced subtracting the volume for the original substrate.
In chemical industry (25% of the total usage) It is used as antifoam agent. It is used in inks and dyes. It is used as a softener and for the treatment of textiles. Citric acid is used in the detergent industry because it can replace polyphosphates.
Citric acid is used in the food and beverage industry. The flavor of fruit juices, candy, ice cream and marmalade is enhanced or preserved by the addition of citric acid. In metal industry
Procedure
In one L flat bottle add 200 ml of salt medium containing sucrose or molasses as carbon source then sterilize. Inoculate the surface of the medium with spores from the slant culture of A. niger. After incubation, titrate a 5 ml sample of the medium using 0.1N NaOH and phenol phthalein as indicator. Calculate the amount of NaOH required to neutralize the acid present from your titration later calculate the percent of acid formed.
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Procedure:
1. Place 300 g of finely shredded cabbage in the 1 dm beaker. Add sufficient sodium chloride solution to just cover the cabbage. 2- Cut three sides of the plastic bag to give a single sheet of approximately 300 mm x 500 mm. Cut two small holes for the PH probe and modified pipette, approximately 150 mm in from each side on the central fold of the sheet. (A third hole will have to be cut if a temperature probe is used). 3. Place plastic over the surface of the cabbage and insert probes and pipette through holes. Make as airtight a seal as possible around each probe with the adhesive tape. Secure the plastic around the beaker with tow elastic bands, Press down with weights to exclude as much air as possible. 4. Record initial pH (and temperature) and continue to record daily for two weeks.
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5- During this period, samples of the liquid should be taken for making bacterial population counts. 6- Samples should also be taken for the calculation of acid content. Sampling for population counts: a. Prepare plates (Rogosa and Glucose Yeast Lemco Agar). b. The bent arm pipette provides safe and accurate sampling from the fermentation vessel. c. As aseptically as possible take 1 cm of liquid from the bottom of the sauerkraut container using a sterile 5 cm bottom of the sauerkraut container using a sterile 5 cm syringe attached to the bent arm pipette with the tubing. d. Add the sample to 99 cm of sterile water (10). Mix thoroughly and then aseptically remove 1 cm of the 10 thoroughly and then aseptically remove 1 cm of the 10 dilution and add to a second bottle of sterile water (10) Aseptically remove 1cm of the second diluted solution and add to a third bottle of sterile water (10). e. Make lawns on both types of agar plates with 0:1 cm of each of the dilutions using three new sterile syringes. Flame the spreader with alcohol between each spreading. f. After incubation of the plates for 24-48 hours (25 C).count the colonies and calculator the population of organisms present in the fermentation (number per cm)
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% lactic acid=
Assuming no acetic acid is present this value can be used as the amount of lactic acid produced by the fermentation. Care will need to be taken when determining the end point of each of the titrations consider how many replicated should be carried out to obtain a meaning ful set of results.
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Procedure
The milk is vigoursly mixed at a temperature between 50 and 760oC to reduce the size of the fat globous and distribute them evenly throughout the fluid. This step increases the viscosity by causing casein micelles to interact with fat globules and denaturated why proteins. Pasteurization or sterilization follows to kill unwanted bacteria, and the milk is then cooled to fermentation temperature, and inoculated with starter culture. Bacterial fermentation produces lactate from lactose and the resulting drop in pH causes casein to precipitate and the product becomes a gel. Yoghurt is naturally flavored by lactic acid, acetaldehyde, diacetyl and other bacterial metabolites but most yoghurt in western countries has fruits or flavorings added.
Procedure: 1- Fill 8 measuring cylinders with a mixture of 10% sucrose and 2% yeast cells. 2- Cover the opening of measuring cylinders with Parafilm and invert each one in beaker contain the same mixture. 3- Poke a tiny hole in the Parafilm with a dissecting needle (to release the pressure). 4- Incubate each beaker in 0, 10, 20, 30, 40, 50, 60 or 70 C water bath for 45 minutes. 5- Measure the volume of carbon dioxide gas in each cylinder at 5 minutes intervals. 6- Record your values in a table and determine the optimum temperature for fermentation.
1- Fill 7 measuring cylinders with a mixture of 2% yeast cells and 10% of glucose, galactose, fructose, maltose, sucrose, lactose or starch. 2- Cover the opening of measuring cylinders with Parafilm and invert each one in beaker contain the same mixture. 3- Poke a tiny hole in the Parafilm with a dissecting needle (to release the pressure).
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4- Incubate each beaker in 40C water bath for 45 minutes. 5- Measure the volume of carbon dioxide gas in each cylinder at 5 minutes intervals. 6- Record your values in a table and determine the best sugar for fermentation.
Procedure
1-Place 50 cm3 water into a small beaker and add 5 g dried yeast. 2- Carefully stir the yeast into the water with a glass rod to ensure a thorough mix. Try not to mix air into the slurry. 3- Pour 50 cm3 4% sodium alginate solution into the yeast slurry. 4- Carefully stir the sodium alginate solution into the yeast slurry to ensure a thorough mix. Again try not to stir air into the mixture. 5- For investigations involving co-immobilization of the enzyme lactase with the yeast cells add 10 cm3 of lactase to the yeast slurry and sodium alginate solution. For control investigation, Do not use the enzyme lactase but add a further 10 cm3 of water to the slurry. 6- Place 200 cm3 2% calcium chloride solution into one of the flasks that is to be used for the fermentation. Add a magnetic follower and place on a magnetic stirrer and start stirring gently or mix by gently swirling the flask by hand. 7- Draw the yeast-alginate mix up into a 10 cm3 syringe. Add the mixture drop by drop 44
into the calcium chloride solution so that it forms small regular beads. To ensure the beads set fully, leave them in the calcium chloride solution for about ten minutes. 8- Separate the beads from the calcium chloride solution by using a tea strainer. 9- Examine the ability of these beads for lactose fermentation.
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